Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10b17
         (712 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g31540.1 68415.m03853 GDSL-motif lipase/hydrolase family prot...    28   5.3  
At2g31550.1 68415.m03854 GDSL-motif lipase/hydrolase family prot...    28   7.0  
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac...    27   9.3  

>At2g31540.1 68415.m03853 GDSL-motif lipase/hydrolase family protein
           similar to family II lipases EXL3 GI:15054386, EXL1
           GI:15054382, EXL2 GI:15054384 from [Arabidopsis
           thaliana]; contains Pfam profile PF00657: GDSL-like
           Lipase/Acylhydrolase
          Length = 360

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = -3

Query: 671 CCETFLLQTLNLNNIFVKLNKNNTSFIYFSMV 576
           CC T  L+T  + N+F  + +N + F++F  +
Sbjct: 305 CCGTGFLETSFMCNVFSPVCQNRSEFLFFDSI 336


>At2g31550.1 68415.m03854 GDSL-motif lipase/hydrolase family protein
           similar to family II lipase EXL3 (GI:15054386), EXL1
           (GI:15054382), EXL2 (GI:15054384) [Arabidopsis
           thaliana]; contains Pfam profile PF00657:
           Lipase/Acylhydrolase with GDSL-like motif
          Length = 219

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = -3

Query: 671 CCETFLLQTLNLNNIFVKLNKNNTSFIYFSMV 576
           CC T  L+T  + N+F  + +N + F++F  +
Sbjct: 164 CCGTGFLETSFMCNVFSPVCQNRSEFMFFDSI 195


>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
           11 {Arabidopsis thaliana}; contains Pfam profile
           PF00022: Actin
          Length = 366

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 17/40 (42%), Positives = 20/40 (50%)
 Frame = -1

Query: 367 VMQPFSPCSVLDTNY*KDIGRLVKRSGSCFHQYWLTKPTY 248
           V+ P S CSV        IG  +  S S FHQ W+TK  Y
Sbjct: 321 VVPPESECSVW-------IGGSILASLSTFHQMWITKDEY 353


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,375,718
Number of Sequences: 28952
Number of extensions: 282888
Number of successful extensions: 464
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 462
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 464
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1535986264
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)