Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc10b12
(477 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L36067-1|AAA29362.1| 229|Anopheles gambiae polyubiquitin protein. 129 4e-32
AF002238-1|AAB97731.1| 327|Anopheles gambiae ribosomal protein ... 31 0.016
AB090814-1|BAC57903.1| 499|Anopheles gambiae gag-like protein p... 27 0.44
AJ515150-1|CAD56157.2| 737|Anopheles gambiae acetylcholinestera... 24 2.4
AJ515149-1|CAD56156.1| 737|Anopheles gambiae acetylcholinestera... 24 2.4
AJ488492-1|CAD32684.2| 623|Anopheles gambiae acetylcholinestera... 24 2.4
DQ013245-1|AAY34441.1| 487|Anopheles gambiae adrenodoxin reduct... 24 3.1
AJ292755-1|CAC00630.1| 837|Anopheles gambiae integrin beta subu... 23 4.1
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona... 23 5.5
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr... 23 5.5
AY578799-1|AAT07304.1| 679|Anopheles gambiae brinker protein. 22 9.6
AY500851-1|AAS77205.1| 605|Anopheles gambiae G-protein coupled ... 22 9.6
AJ439060-18|CAD27769.1| 257|Anopheles gambiae hypothetical prot... 22 9.6
>L36067-1|AAA29362.1| 229|Anopheles gambiae polyubiquitin protein.
Length = 229
Score = 129 bits (312), Expect = 4e-32
Identities = 58/76 (76%), Positives = 69/76 (90%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 375
MQIF+KTLTGKTIT E EP++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 376 IQKESTLHMVLRLRGG 423
IQKESTLH+VLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 129 bits (312), Expect = 4e-32
Identities = 58/76 (76%), Positives = 69/76 (90%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 375
MQIF+KTLTGKTIT E EP++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 376 IQKESTLHMVLRLRGG 423
IQKESTLH+VLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 129 bits (312), Expect = 4e-32
Identities = 58/76 (76%), Positives = 69/76 (90%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 375
MQIF+KTLTGKTIT E EP++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 376 IQKESTLHMVLRLRGG 423
IQKESTLH+VLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
>AF002238-1|AAB97731.1| 327|Anopheles gambiae ribosomal protein L5
protein.
Length = 327
Score = 31.5 bits (68), Expect = 0.016
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +2
Query: 203 YSSKH*RAKPLPP-KRNPQRRWPISSKKLPIKKVCP*INKDLSLRANNWKIPKLWPITIF 379
Y + H + +PP +RNP+RR P S + P + P + S R +W P+ P +
Sbjct: 240 YKNAHASIRKIPPSRRNPRRRSPRSGGRWPSCRSPPARRRSRSTRPTSW--PRSRPTSKP 297
Query: 380 KR 385
KR
Sbjct: 298 KR 299
>AB090814-1|BAC57903.1| 499|Anopheles gambiae gag-like protein
protein.
Length = 499
Score = 26.6 bits (56), Expect = 0.44
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +1
Query: 181 SNSVKMQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVD-QQRLIFAGKQ 342
+ +VK ++T+ + I ETE A+ DL+ +I EG V+ + F+G Q
Sbjct: 339 AGNVKSLGQMETVEIRFIDEETEAADVERDLRNQITGLEGYKVEVTMKTSFSGMQ 393
>AJ515150-1|CAD56157.2| 737|Anopheles gambiae acetylcholinesterase
protein.
Length = 737
Score = 24.2 bits (50), Expect = 2.4
Identities = 12/27 (44%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Frame = -3
Query: 199 AFLHYYL-QTTTVAANVPLPPPMVEPC 122
AF YL Q +N+P P P EPC
Sbjct: 684 AFWKKYLPQLVAATSNLPGPAPPSEPC 710
>AJ515149-1|CAD56156.1| 737|Anopheles gambiae acetylcholinesterase
protein.
Length = 737
Score = 24.2 bits (50), Expect = 2.4
Identities = 12/27 (44%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Frame = -3
Query: 199 AFLHYYL-QTTTVAANVPLPPPMVEPC 122
AF YL Q +N+P P P EPC
Sbjct: 684 AFWKKYLPQLVAATSNLPGPAPPSEPC 710
>AJ488492-1|CAD32684.2| 623|Anopheles gambiae acetylcholinesterase
protein.
Length = 623
Score = 24.2 bits (50), Expect = 2.4
Identities = 12/27 (44%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Frame = -3
Query: 199 AFLHYYL-QTTTVAANVPLPPPMVEPC 122
AF YL Q +N+P P P EPC
Sbjct: 570 AFWKKYLPQLVAATSNLPGPAPPSEPC 596
>DQ013245-1|AAY34441.1| 487|Anopheles gambiae adrenodoxin reductase
protein.
Length = 487
Score = 23.8 bits (49), Expect = 3.1
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -1
Query: 390 RFLLNIVIGHSFGIFQLFARKDKSLLIYG 304
RFL N+ +G F + +L R LL YG
Sbjct: 99 RFLGNLCLGKDFTLEELRERYHAVLLTYG 127
>AJ292755-1|CAC00630.1| 837|Anopheles gambiae integrin beta subunit
protein.
Length = 837
Score = 23.4 bits (48), Expect = 4.1
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +1
Query: 286 ADKEGVPVDQQRLIFAGKQLEDSKTM 363
A E PVD L+ K +ED KT+
Sbjct: 166 AQAEDYPVDLYYLMDLSKSMEDDKTI 191
>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
anion exchanger protein.
Length = 1102
Score = 23.0 bits (47), Expect = 5.5
Identities = 13/43 (30%), Positives = 17/43 (39%), Gaps = 5/43 (11%)
Frame = +2
Query: 47 IFDYGRGNQLPLRGGDSWCGCRPPVA-----RFHHRWRQGHIR 160
+F G+ L GG C C PP H+W Q +R
Sbjct: 659 VFHIGQEYPLNTAGGKYDCACLPPATHELTPEAVHQWAQYDLR 701
>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
precursor protein.
Length = 1623
Score = 23.0 bits (47), Expect = 5.5
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -2
Query: 95 NHLPSTAIDFHARNQKLSGRRARSD 21
N +TA D H +L+GR A++D
Sbjct: 1463 NATKNTARDLHHEADQLNGRLAKTD 1487
>AY578799-1|AAT07304.1| 679|Anopheles gambiae brinker protein.
Length = 679
Score = 22.2 bits (45), Expect = 9.6
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = -1
Query: 108 HPHHESPPLNG 76
HPHH P L G
Sbjct: 162 HPHHHHPGLTG 172
>AY500851-1|AAS77205.1| 605|Anopheles gambiae G-protein coupled
receptor 3 protein.
Length = 605
Score = 22.2 bits (45), Expect = 9.6
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +3
Query: 123 HGSTIGGGRGTFAATVVV 176
HGS++ GG G+ + V V
Sbjct: 153 HGSSVAGGLGSVGSFVAV 170
>AJ439060-18|CAD27769.1| 257|Anopheles gambiae hypothetical protein
protein.
Length = 257
Score = 22.2 bits (45), Expect = 9.6
Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = +2
Query: 221 RAKPLPPKRNPQRRWPISSKKL-PIKKVC 304
R P+PP ++ QRR SS + + VC
Sbjct: 63 RMPPVPPPKHSQRRRRSSSPRTRQFRSVC 91
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 519,518
Number of Sequences: 2352
Number of extensions: 11831
Number of successful extensions: 29
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 42095889
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -