Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10b06
         (451 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    27   0.062
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    25   0.43 
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    25   0.43 
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    23   1.3  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   2.3  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    21   4.0  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    21   4.0  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   4.0  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   5.4  

>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 27.5 bits (58), Expect = 0.062
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +1

Query: 235 LKVRCVAMAIVWPLWC 282
           LK R +  A +WPLWC
Sbjct: 560 LKSRGIRTAAIWPLWC 575


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 24.6 bits (51), Expect = 0.43
 Identities = 10/19 (52%), Positives = 10/19 (52%)
 Frame = -2

Query: 117 PTPSYIDPGLFFAQPGILC 61
           P PS IDPG      G LC
Sbjct: 153 PNPSIIDPGPALPPAGFLC 171


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 24.6 bits (51), Expect = 0.43
 Identities = 10/19 (52%), Positives = 10/19 (52%)
 Frame = -2

Query: 117 PTPSYIDPGLFFAQPGILC 61
           P PS IDPG      G LC
Sbjct: 153 PNPSIIDPGPALPPTGFLC 171


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 9/55 (16%)
 Frame = -1

Query: 433 VFIYTQFFW*YLL*LSXITHTFLH-NNSTLSLVY--------SKLSNTSMSVFCS 296
           +FI  + F+  LL +S   +  LH NN+T   +Y        SK+S   +  FC+
Sbjct: 132 IFITCELFFVILLWISFFLNFMLHCNNTTWRCLYRWIVLYTLSKMSQVMLIQFCA 186


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +3

Query: 303 NTDMEVLESLEYTSDNVELLC 365
           +TD++VL    ++  NV LLC
Sbjct: 234 STDIKVLGYQRHSKQNVALLC 254


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 10/37 (27%), Positives = 21/37 (56%)
 Frame = -1

Query: 352 TLSLVYSKLSNTSMSVFCS*FRSNTTTAKQSPLQHIA 242
           ++ +V+S ++NT++ V     R  T +   + L H+A
Sbjct: 60  SILMVFSAIANTTVLVLIVKRRRKTPSRINTMLMHLA 96


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 10/37 (27%), Positives = 21/37 (56%)
 Frame = -1

Query: 352 TLSLVYSKLSNTSMSVFCS*FRSNTTTAKQSPLQHIA 242
           ++ +V+S ++NT++ V     R  T +   + L H+A
Sbjct: 60  SILMVFSAIANTTVLVLIVKRRRKTPSRINTMLMHLA 96


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 8/37 (21%), Positives = 22/37 (59%)
 Frame = -3

Query: 215 ICIINVFHVPLFERVRNKQYISRQMHNVKNKLGRRRV 105
           IC   + ++ +F +  N+Q + +++     ++G+R+V
Sbjct: 323 ICYKLLSNLGIFPKTTNEQLLRKELLLFAEQMGQRQV 359


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 6/16 (37%), Positives = 9/16 (56%)
 Frame = +1

Query: 235 LKVRCVAMAIVWPLWC 282
           L  R +    +WP+WC
Sbjct: 607 LVARGLGAEAMWPVWC 622


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,090
Number of Sequences: 336
Number of extensions: 2807
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10195961
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)