Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10b06
         (451 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BX538174-1|CAD98049.1|  723|Homo sapiens hypothetical protein pr...    29   5.5  
BC130576-1|AAI30577.1|  723|Homo sapiens dpy-19-like 4 (C. elega...    29   5.5  
BC126193-1|AAI26194.1|  723|Homo sapiens dpy-19-like 4 (C. elega...    29   5.5  
BC110870-1|AAI10871.1|  723|Homo sapiens dpy-19-like 4 (C. elega...    29   5.5  
AK123682-1|BAC85675.1|  723|Homo sapiens protein ( Homo sapiens ...    29   5.5  
AK123618-1|BAC85664.1|  396|Homo sapiens protein ( Homo sapiens ...    29   5.5  

>BX538174-1|CAD98049.1|  723|Homo sapiens hypothetical protein
           protein.
          Length = 723

 Score = 29.5 bits (63), Expect = 5.5
 Identities = 20/95 (21%), Positives = 37/95 (38%), Gaps = 1/95 (1%)
 Frame = +3

Query: 132 NIMHLTANVLLVPNALKKRDVKYIYNTYLKNYSVIEGAMCCN-GDCLAVVVLDRNQLQNT 308
           +++    N+  + +     D+  I  +Y  NY ++E A+C   G      V D   + N 
Sbjct: 609 DLLKRNENIYQIYSKRSAEDIYKILTSYKANYLIVEDAICNEVGPMRGCRVKDLLDIANG 668

Query: 309 DMEVLESLEYTSDNVELLCKKVCVIXDNYNKYYQK 413
            M   E  + T       C +V +    Y  Y+ +
Sbjct: 669 HMVCEEGDKLTYSKYGRFCHEVKINYSPYVNYFTR 703


>BC130576-1|AAI30577.1|  723|Homo sapiens dpy-19-like 4 (C. elegans)
           protein.
          Length = 723

 Score = 29.5 bits (63), Expect = 5.5
 Identities = 20/95 (21%), Positives = 37/95 (38%), Gaps = 1/95 (1%)
 Frame = +3

Query: 132 NIMHLTANVLLVPNALKKRDVKYIYNTYLKNYSVIEGAMCCN-GDCLAVVVLDRNQLQNT 308
           +++    N+  + +     D+  I  +Y  NY ++E A+C   G      V D   + N 
Sbjct: 609 DLLKRNENIYQIYSKRSAEDIYKILTSYKANYLIVEDAICNEVGPMRGCRVKDLLDIANG 668

Query: 309 DMEVLESLEYTSDNVELLCKKVCVIXDNYNKYYQK 413
            M   E  + T       C +V +    Y  Y+ +
Sbjct: 669 HMVCEEGDKLTYSKYGRFCHEVKINYSPYVNYFTR 703


>BC126193-1|AAI26194.1|  723|Homo sapiens dpy-19-like 4 (C. elegans)
           protein.
          Length = 723

 Score = 29.5 bits (63), Expect = 5.5
 Identities = 20/95 (21%), Positives = 37/95 (38%), Gaps = 1/95 (1%)
 Frame = +3

Query: 132 NIMHLTANVLLVPNALKKRDVKYIYNTYLKNYSVIEGAMCCN-GDCLAVVVLDRNQLQNT 308
           +++    N+  + +     D+  I  +Y  NY ++E A+C   G      V D   + N 
Sbjct: 609 DLLKRNENIYQIYSKRSAEDIYKILTSYKANYLIVEDAICNEVGPMRGCRVKDLLDIANG 668

Query: 309 DMEVLESLEYTSDNVELLCKKVCVIXDNYNKYYQK 413
            M   E  + T       C +V +    Y  Y+ +
Sbjct: 669 HMVCEEGDKLTYSKYGRFCHEVKINYSPYVNYFTR 703


>BC110870-1|AAI10871.1|  723|Homo sapiens dpy-19-like 4 (C. elegans)
           protein.
          Length = 723

 Score = 29.5 bits (63), Expect = 5.5
 Identities = 20/95 (21%), Positives = 37/95 (38%), Gaps = 1/95 (1%)
 Frame = +3

Query: 132 NIMHLTANVLLVPNALKKRDVKYIYNTYLKNYSVIEGAMCCN-GDCLAVVVLDRNQLQNT 308
           +++    N+  + +     D+  I  +Y  NY ++E A+C   G      V D   + N 
Sbjct: 609 DLLKRNENIYQIYSKRSAEDIYKILTSYKANYLIVEDAICNEVGPMRGCRVKDLLDIANG 668

Query: 309 DMEVLESLEYTSDNVELLCKKVCVIXDNYNKYYQK 413
            M   E  + T       C +V +    Y  Y+ +
Sbjct: 669 HMVCEEGDKLTYSKYGRFCHEVKINYSPYVNYFTR 703


>AK123682-1|BAC85675.1|  723|Homo sapiens protein ( Homo sapiens
           cDNA FLJ41688 fis, clone HCASM2007047. ).
          Length = 723

 Score = 29.5 bits (63), Expect = 5.5
 Identities = 20/95 (21%), Positives = 37/95 (38%), Gaps = 1/95 (1%)
 Frame = +3

Query: 132 NIMHLTANVLLVPNALKKRDVKYIYNTYLKNYSVIEGAMCCN-GDCLAVVVLDRNQLQNT 308
           +++    N+  + +     D+  I  +Y  NY ++E A+C   G      V D   + N 
Sbjct: 609 DLLKRNENIYQIYSKRSAEDIYKILTSYKANYLIVEDAICNEVGPTRGCRVKDLLDIANG 668

Query: 309 DMEVLESLEYTSDNVELLCKKVCVIXDNYNKYYQK 413
            M   E  + T       C +V +    Y  Y+ +
Sbjct: 669 HMVCEEGDKLTYSKYGRFCHEVKINYSPYVNYFTR 703


>AK123618-1|BAC85664.1|  396|Homo sapiens protein ( Homo sapiens
           cDNA FLJ41624 fis, clone CTONG3009328. ).
          Length = 396

 Score = 29.5 bits (63), Expect = 5.5
 Identities = 20/95 (21%), Positives = 37/95 (38%), Gaps = 1/95 (1%)
 Frame = +3

Query: 132 NIMHLTANVLLVPNALKKRDVKYIYNTYLKNYSVIEGAMCCN-GDCLAVVVLDRNQLQNT 308
           +++    N+  + +     D+  I  +Y  NY ++E A+C   G      V D   + N 
Sbjct: 282 DLLKRNENIYQIYSKRSAEDIYKILTSYKANYLIVEDAICNEVGPMRGCRVKDLLDIANG 341

Query: 309 DMEVLESLEYTSDNVELLCKKVCVIXDNYNKYYQK 413
            M   E  + T       C +V +    Y  Y+ +
Sbjct: 342 HMVCEEGDKLTYSKYGRFCHEVKINYSPYVNYFTR 376


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,182,080
Number of Sequences: 237096
Number of extensions: 1413722
Number of successful extensions: 2523
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2481
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2523
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3701294870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)