Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc10b06
(451 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein. 25 0.50
AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly pro... 25 0.50
AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly pro... 25 0.50
AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precur... 23 1.2
X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein. 23 2.0
EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2 prot... 23 2.0
AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2 prot... 23 2.0
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 22 2.7
AF023666-1|AAC14552.1| 363|Apis mellifera sn-glycerol-3-phospha... 22 3.6
DQ091183-1|AAZ42363.1| 128|Apis mellifera lipophorin receptor p... 21 4.7
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 21 4.7
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 21 4.7
AF441189-1|AAL73401.1| 134|Apis mellifera ribosomal protein 49 ... 21 4.7
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 21 4.7
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 21 6.2
AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive... 21 6.2
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 21 8.2
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 21 8.2
>D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein.
Length = 432
Score = 24.6 bits (51), Expect = 0.50
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = -3
Query: 194 HVPLFERVRNKQYI 153
HVP+F+R N++YI
Sbjct: 365 HVPIFDRYINREYI 378
>AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 24.6 bits (51), Expect = 0.50
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = -3
Query: 194 HVPLFERVRNKQYI 153
HVP+F+R N++YI
Sbjct: 365 HVPIFDRYINREYI 378
>AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 24.6 bits (51), Expect = 0.50
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = -3
Query: 194 HVPLFERVRNKQYI 153
HVP+F+R N++YI
Sbjct: 365 HVPIFDRYINREYI 378
>AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precursor
protein.
Length = 405
Score = 23.4 bits (48), Expect = 1.2
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -2
Query: 264 NRHCNTSHLQLHCNFSNMY 208
N++CN L + NF+N Y
Sbjct: 92 NKNCNAGSLTVKKNFANKY 110
>X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein.
Length = 162
Score = 22.6 bits (46), Expect = 2.0
Identities = 7/21 (33%), Positives = 12/21 (57%)
Frame = -2
Query: 246 SHLQLHCNFSNMYYKCISRPA 184
SH +L C+ + +Y C+ A
Sbjct: 83 SHTRLSCDCDDKFYDCLKNSA 103
>EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 22.6 bits (46), Expect = 2.0
Identities = 7/21 (33%), Positives = 12/21 (57%)
Frame = -2
Query: 246 SHLQLHCNFSNMYYKCISRPA 184
SH +L C+ + +Y C+ A
Sbjct: 88 SHTRLSCDCDDKFYDCLKNSA 108
>AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 22.6 bits (46), Expect = 2.0
Identities = 7/21 (33%), Positives = 12/21 (57%)
Frame = -2
Query: 246 SHLQLHCNFSNMYYKCISRPA 184
SH +L C+ + +Y C+ A
Sbjct: 88 SHTRLSCDCDDKFYDCLKNSA 108
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 22.2 bits (45), Expect = 2.7
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = +3
Query: 387 DNYNKYYQKNCV*INTKFYY 446
+NYN Y N N K YY
Sbjct: 328 NNYNNYNNNNYNNYNKKLYY 347
>AF023666-1|AAC14552.1| 363|Apis mellifera sn-glycerol-3-phosphate
dehydrogenase protein.
Length = 363
Score = 21.8 bits (44), Expect = 3.6
Identities = 10/28 (35%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = -3
Query: 233 YTVIFQICIINVFHVPLFERVRN-KQYI 153
+T + +ICI + L E +RN +YI
Sbjct: 323 FTTVHRICIGETMPMELIENLRNHPEYI 350
>DQ091183-1|AAZ42363.1| 128|Apis mellifera lipophorin receptor
protein.
Length = 128
Score = 21.4 bits (43), Expect = 4.7
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = -2
Query: 93 GLFFAQPGILCVTPHSSHSI 34
GL G++CV S HSI
Sbjct: 67 GLKLLSDGLMCVEKDSIHSI 86
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 21.4 bits (43), Expect = 4.7
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = +3
Query: 168 PNALKKRDVKYIYNTYLKNYSVIEGAMCCNGDCLAV 275
P A + K +Y+ L NY+ + + N D L V
Sbjct: 13 PGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTV 48
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.4 bits (43), Expect = 4.7
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -2
Query: 246 SHLQLHCNFSNMYY 205
S L CN+SN YY
Sbjct: 305 SSLSNSCNYSNNYY 318
>AF441189-1|AAL73401.1| 134|Apis mellifera ribosomal protein 49
protein.
Length = 134
Score = 21.4 bits (43), Expect = 4.7
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -1
Query: 106 LYRPRFIFCATRHFVRH 56
+YRP + T+ F+RH
Sbjct: 6 VYRPTIVKKRTKKFIRH 22
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 21.4 bits (43), Expect = 4.7
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -1
Query: 268 KQSPLQHIAPSITL 227
+QSP QH+ P TL
Sbjct: 1007 QQSPQQHVLPGKTL 1020
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 21.0 bits (42), Expect = 6.2
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = +3
Query: 189 DVKYIYNTYLKNYSVIEGAMCCNGDCLAVVVLDRNQLQNTDMEVLESLEYTS 344
D K +Y+ L NY+ + + N D + VV L Q D+ + + + T+
Sbjct: 20 DAKRLYDDLLSNYNRLIRPVSNNNDTV-VVKLGLRLSQLIDLNLKDQILTTN 70
>AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive
opsin protein.
Length = 371
Score = 21.0 bits (42), Expect = 6.2
Identities = 19/76 (25%), Positives = 31/76 (40%)
Frame = -1
Query: 433 VFIYTQFFW*YLL*LSXITHTFLHNNSTLSLVYSKLSNTSMSVFCS*FRSNTTTAKQSPL 254
+F+ T F + Y + + I + + S + L + + RSN T+ QS
Sbjct: 210 IFVATIFTFSYCIPMILIIYYYSQIVSHVVNHEKALREQAKKMNVDSLRSNANTSSQSAE 269
Query: 253 QHIAPSITL*FFKYVL 206
IA + F YVL
Sbjct: 270 IRIAKAAITICFLYVL 285
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 20.6 bits (41), Expect = 8.2
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = +3
Query: 390 NYNKYYQKNCV*INTKFYY 446
NYN Y N N K YY
Sbjct: 99 NYNNKYNYNNNNYNKKLYY 117
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 20.6 bits (41), Expect = 8.2
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = +3
Query: 387 DNYNKYYQKNCV*INTKFYY 446
+NYN Y NC K YY
Sbjct: 341 NNYNNNYNNNC----KKLYY 356
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,296
Number of Sequences: 438
Number of extensions: 3378
Number of successful extensions: 33
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11820384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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