Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc10b01
(355 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83128-1|CAB05635.1| 92|Caenorhabditis elegans Hypothetical pr... 113 3e-26
Z77131-1|CAB00854.1| 91|Caenorhabditis elegans Hypothetical pr... 107 3e-24
AF098986-5|AAC67426.1| 671|Caenorhabditis elegans Hypothetical ... 31 0.23
U41275-2|AAA82465.1| 438|Caenorhabditis elegans Hypothetical pr... 31 0.31
Z92777-6|CAE17682.1| 353|Caenorhabditis elegans Hypothetical pr... 28 1.6
Z50742-2|CAA90616.1| 491|Caenorhabditis elegans Hypothetical pr... 27 3.8
L23646-5|ABD94102.1| 145|Caenorhabditis elegans Hypothetical pr... 26 6.6
L23646-4|AAA28039.1| 152|Caenorhabditis elegans Hypothetical pr... 26 6.6
AF039049-1|AAB94253.1| 299|Caenorhabditis elegans Serpentine re... 26 8.7
>Z83128-1|CAB05635.1| 92|Caenorhabditis elegans Hypothetical
protein W01D2.1 protein.
Length = 92
Score = 113 bits (272), Expect = 3e-26
Identities = 47/87 (54%), Positives = 60/87 (68%)
Frame = +3
Query: 27 MTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXX 206
MTKGT +FGK+ K+HTLC+RCG+SS+HIQK +CA CGYP AK R+Y+W K+
Sbjct: 1 MTKGTQAFGKKHVKSHTLCKRCGKSSFHIQKKRCASCGYPDAKKRTYNWGAKSIRRRTTG 60
Query: 207 XXXMRHLKIVRRRFRNGFKEGKPTPPK 287
RHL+ V RFRNGF+EG P+
Sbjct: 61 TGRTRHLRDVNARFRNGFREGTTPKPR 87
>Z77131-1|CAB00854.1| 91|Caenorhabditis elegans Hypothetical
protein C54C6.1 protein.
Length = 91
Score = 107 bits (256), Expect = 3e-24
Identities = 45/85 (52%), Positives = 57/85 (67%)
Frame = +3
Query: 27 MTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXX 206
MTKGT +FGK+ K+HTLC+RCG+SS+HIQK +CA CGY AK R+Y+W K+
Sbjct: 1 MTKGTQAFGKKHVKSHTLCKRCGKSSFHIQKKRCASCGYQDAKKRTYNWGAKSIRRRTTG 60
Query: 207 XXXMRHLKIVRRRFRNGFKEGKPTP 281
RHL+ V RFRNGF+ P P
Sbjct: 61 TGRTRHLRDVNARFRNGFRGTTPKP 85
>AF098986-5|AAC67426.1| 671|Caenorhabditis elegans Hypothetical
protein C36C9.4 protein.
Length = 671
Score = 31.1 bits (67), Expect = 0.23
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +3
Query: 45 SFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAA 152
++ K TH C +CG+ + + KC CG P A
Sbjct: 93 TYNKNNFSTHHFCNKCGKVAQN--SKKCKHCGGPVA 126
>U41275-2|AAA82465.1| 438|Caenorhabditis elegans Hypothetical
protein T25D1.2 protein.
Length = 438
Score = 30.7 bits (66), Expect = 0.31
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +3
Query: 45 SFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAA 152
++ K TH C +CG+ + + KC CG P A
Sbjct: 165 TYNKNNFSTHHFCNKCGKVAQN--SKKCKYCGGPVA 198
>Z92777-6|CAE17682.1| 353|Caenorhabditis elegans Hypothetical
protein C17H1.9 protein.
Length = 353
Score = 28.3 bits (60), Expect = 1.6
Identities = 12/39 (30%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
Frame = +1
Query: 58 AEIRPIRYAEDVVDRH---ITFKNQNAPNVDILQQNYDP 165
A+++ I+Y D +++H + F+NQ + L+ N DP
Sbjct: 230 ADLKKIKYTSDEIEKHKSKLEFRNQQLESSRTLEINADP 268
>Z50742-2|CAA90616.1| 491|Caenorhabditis elegans Hypothetical
protein K09A11.2 protein.
Length = 491
Score = 27.1 bits (57), Expect = 3.8
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = -3
Query: 353 FFLVFLIFI--YLAHIDS*RSYSLLGRRWFPFFKTITEAPPDNLQ 225
F L F+IFI Y+ H S G PF I + PPDN+Q
Sbjct: 4 FILAFVIFIIFYVFHFYWKVSKYPKGPLPLPFIGNIHQFPPDNVQ 48
>L23646-5|ABD94102.1| 145|Caenorhabditis elegans Hypothetical
protein F44E2.6b protein.
Length = 145
Score = 26.2 bits (55), Expect = 6.6
Identities = 14/50 (28%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
Frame = +3
Query: 3 FRIVK-SDKMTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPA 149
+R+ + S T T F K +C CG ++ A CG+PA
Sbjct: 32 YRVARESGTETPHTGGFNDHFEKGRYVCLCCGSELFNSDAKFWAGCGWPA 81
>L23646-4|AAA28039.1| 152|Caenorhabditis elegans Hypothetical
protein F44E2.6 protein.
Length = 152
Score = 26.2 bits (55), Expect = 6.6
Identities = 14/50 (28%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
Frame = +3
Query: 3 FRIVK-SDKMTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPA 149
+R+ + S T T F K +C CG ++ A CG+PA
Sbjct: 39 YRVARESGTETPHTGGFNDHFEKGRYVCLCCGSELFNSDAKFWAGCGWPA 88
>AF039049-1|AAB94253.1| 299|Caenorhabditis elegans Serpentine
receptor, class x protein68 protein.
Length = 299
Score = 25.8 bits (54), Expect = 8.7
Identities = 8/34 (23%), Positives = 20/34 (58%)
Frame = -2
Query: 138 HIGRILIFECDMTIYHIFCITYGSYFGAYRSLRY 37
H G +++F +++++ F I+ +F + L+Y
Sbjct: 77 HCGFVILFCYELSVFTHFAISINRFFAVWMPLKY 110
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,574,165
Number of Sequences: 27780
Number of extensions: 140152
Number of successful extensions: 309
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 308
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 309
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 471339352
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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