Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10a24
         (714 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-2735|AAZ52804.1|  180|Drosophila melanogaster CG33724-P...    31   1.6  
BT012483-1|AAS93754.1|  326|Drosophila melanogaster LD45673p pro...    30   2.7  
AE014296-3442|AAF51653.2|  445|Drosophila melanogaster CG11456-P...    30   2.7  
AY051552-1|AAK92976.1|  418|Drosophila melanogaster GH20109p pro...    29   4.7  
AE014296-1259|AAF50560.2|  418|Drosophila melanogaster CG8560-PA...    29   4.7  
AE013599-3313|AAF46788.1|  404|Drosophila melanogaster CG13500-P...    29   4.7  

>AE013599-2735|AAZ52804.1|  180|Drosophila melanogaster CG33724-PA
           protein.
          Length = 180

 Score = 31.1 bits (67), Expect = 1.6
 Identities = 25/96 (26%), Positives = 38/96 (39%)
 Frame = +1

Query: 127 NTLALKSINFLNM*YFNFATTRTCARL*KTTTITVCKYLKRPPTTCATSGTILNAHSKRQ 306
           N  A K   F N  Y +F   ++      TT   +C +  R  T    +G +       +
Sbjct: 90  NAAASKPCEFFNRYYISFFLVKSTESNLPTTGAEMCPF--RKGTYFVKNGVV-----STE 142

Query: 307 CWATCVCLATNRQCIRFLKNGFCCHTTKWSLSKANL 414
            W   V    NR  I +LKNG C    + ++S A +
Sbjct: 143 DWPPIVFKGLNRFTISYLKNGECVGGVQLTISIAEI 178


>BT012483-1|AAS93754.1|  326|Drosophila melanogaster LD45673p
           protein.
          Length = 326

 Score = 30.3 bits (65), Expect = 2.7
 Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
 Frame = +1

Query: 472 KRSKFKFEIRLCMTACRNCTKWVAF*SCGRMAVEIM*HTRCETPIWKAILISLSAKV-PP 648
           K   FKF+    M    +C K  +F SC    +E+    RC   +WKA  + +   V P 
Sbjct: 105 KECPFKFQDATKMELHCSCHKGGSF-SCCECGMELPNWRRCSAHLWKAHQVDVDLLVCPV 163

Query: 649 FEKN 660
           FE N
Sbjct: 164 FECN 167


>AE014296-3442|AAF51653.2|  445|Drosophila melanogaster CG11456-PA
           protein.
          Length = 445

 Score = 30.3 bits (65), Expect = 2.7
 Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
 Frame = +1

Query: 472 KRSKFKFEIRLCMTACRNCTKWVAF*SCGRMAVEIM*HTRCETPIWKAILISLSAKV-PP 648
           K   FKF+    M    +C K  +F SC    +E+    RC   +WKA  + +   V P 
Sbjct: 105 KECPFKFQDATKMELHCSCHKGGSF-SCCECGMELPNWRRCSAHLWKAHQVDVDLLVCPV 163

Query: 649 FEKN 660
           FE N
Sbjct: 164 FECN 167


>AY051552-1|AAK92976.1|  418|Drosophila melanogaster GH20109p
           protein.
          Length = 418

 Score = 29.5 bits (63), Expect = 4.7
 Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = -1

Query: 570 YCHTTTRLKRNPFRAIPASCH-TQTNLEFEF 481
           Y HTTTR+ R   + I ++C+ T  N  F+F
Sbjct: 228 YSHTTTRMWRKTRKPISSACYGTDANRNFDF 258


>AE014296-1259|AAF50560.2|  418|Drosophila melanogaster CG8560-PA
           protein.
          Length = 418

 Score = 29.5 bits (63), Expect = 4.7
 Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = -1

Query: 570 YCHTTTRLKRNPFRAIPASCH-TQTNLEFEF 481
           Y HTTTR+ R   + I ++C+ T  N  F+F
Sbjct: 228 YSHTTTRMWRKTRKPISSACYGTDANRNFDF 258


>AE013599-3313|AAF46788.1|  404|Drosophila melanogaster CG13500-PA
           protein.
          Length = 404

 Score = 29.5 bits (63), Expect = 4.7
 Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
 Frame = +3

Query: 54  WICLRLNDAIIKRHVLVLSEY--ADLKYLGFEKYKFFE 161
           W  LRL++  I RHVL+L  +  A   YLG  + ++ E
Sbjct: 4   WHSLRLSNRYISRHVLLLLRFYLAQFYYLGLMRLRYDE 41


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,533,906
Number of Sequences: 53049
Number of extensions: 778228
Number of successful extensions: 2125
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2011
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2114
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3170136354
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)