Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10a24
         (714 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z99283-7|CAB16537.2|  985|Caenorhabditis elegans Hypothetical pr...    31   0.62 
Z92782-14|CAI46605.1|  985|Caenorhabditis elegans Hypothetical p...    31   0.62 
AF016421-6|AAT92074.1|  984|Caenorhabditis elegans Hypothetical ...    31   0.62 
AF016421-5|AAO12429.1| 1008|Caenorhabditis elegans Hypothetical ...    31   0.62 
AF016421-4|AAC25789.1| 1067|Caenorhabditis elegans Hypothetical ...    31   0.62 
AF016421-3|AAM45374.1| 1051|Caenorhabditis elegans Hypothetical ...    31   0.62 
U55372-1|AAA98002.2|  816|Caenorhabditis elegans Hypothetical pr...    31   0.82 
U41029-3|AAF99952.2|  886|Caenorhabditis elegans Hypothetical pr...    31   0.82 
U88315-15|AAB42365.1|  351|Caenorhabditis elegans Annexin family...    30   1.4  
U55372-2|AAA98001.1|  980|Caenorhabditis elegans Hypothetical pr...    30   1.4  
Z93779-1|CAB07849.2| 2103|Caenorhabditis elegans Hypothetical pr...    30   1.9  
Z78543-7|CAB01757.2| 2103|Caenorhabditis elegans Hypothetical pr...    30   1.9  
Z66566-5|CAA91487.2| 2103|Caenorhabditis elegans Hypothetical pr...    30   1.9  
Z81543-1|CAB04423.2|  543|Caenorhabditis elegans Hypothetical pr...    29   2.5  
Z79603-8|CAH04750.1|  137|Caenorhabditis elegans Hypothetical pr...    29   4.4  
AF022976-4|AAC69083.2|  345|Caenorhabditis elegans Serpentine re...    28   7.6  

>Z99283-7|CAB16537.2|  985|Caenorhabditis elegans Hypothetical
           protein Y70C5C.1 protein.
          Length = 985

 Score = 31.5 bits (68), Expect = 0.62
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +3

Query: 462 LITEEEQIQIRDSFVYDSLQELHEMGCVLVLWSYG 566
           ++  E Q+   D ++Y  LQ  H++GCV V +  G
Sbjct: 731 ILRREIQLNNGDEYIYRHLQTTHDVGCVQVTYQIG 765


>Z92782-14|CAI46605.1|  985|Caenorhabditis elegans Hypothetical
           protein Y70C5C.1 protein.
          Length = 985

 Score = 31.5 bits (68), Expect = 0.62
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +3

Query: 462 LITEEEQIQIRDSFVYDSLQELHEMGCVLVLWSYG 566
           ++  E Q+   D ++Y  LQ  H++GCV V +  G
Sbjct: 731 ILRREIQLNNGDEYIYRHLQTTHDVGCVQVTYQIG 765


>AF016421-6|AAT92074.1|  984|Caenorhabditis elegans Hypothetical
           protein F44E7.4d protein.
          Length = 984

 Score = 31.5 bits (68), Expect = 0.62
 Identities = 20/55 (36%), Positives = 30/55 (54%)
 Frame = +3

Query: 474 EEQIQIRDSFVYDSLQELHEMGCVLVLWSYGSRDHVAHSMRNADLEGYFDIIISE 638
           E Q+   D +VY  LQ+ H++GCV V +  G    V ++  NA + G  D +I E
Sbjct: 810 ELQLNNGDEYVYRHLQKTHDVGCVEVTYQIG----VQNTYDNA-VVGLIDQLIRE 859


>AF016421-5|AAO12429.1| 1008|Caenorhabditis elegans Hypothetical
           protein F44E7.4c protein.
          Length = 1008

 Score = 31.5 bits (68), Expect = 0.62
 Identities = 20/55 (36%), Positives = 30/55 (54%)
 Frame = +3

Query: 474 EEQIQIRDSFVYDSLQELHEMGCVLVLWSYGSRDHVAHSMRNADLEGYFDIIISE 638
           E Q+   D +VY  LQ+ H++GCV V +  G    V ++  NA + G  D +I E
Sbjct: 751 ELQLNNGDEYVYRHLQKTHDVGCVEVTYQIG----VQNTYDNA-VVGLIDQLIRE 800


>AF016421-4|AAC25789.1| 1067|Caenorhabditis elegans Hypothetical
           protein F44E7.4a protein.
          Length = 1067

 Score = 31.5 bits (68), Expect = 0.62
 Identities = 20/55 (36%), Positives = 30/55 (54%)
 Frame = +3

Query: 474 EEQIQIRDSFVYDSLQELHEMGCVLVLWSYGSRDHVAHSMRNADLEGYFDIIISE 638
           E Q+   D +VY  LQ+ H++GCV V +  G    V ++  NA + G  D +I E
Sbjct: 810 ELQLNNGDEYVYRHLQKTHDVGCVEVTYQIG----VQNTYDNA-VVGLIDQLIRE 859


>AF016421-3|AAM45374.1| 1051|Caenorhabditis elegans Hypothetical
           protein F44E7.4b protein.
          Length = 1051

 Score = 31.5 bits (68), Expect = 0.62
 Identities = 20/55 (36%), Positives = 30/55 (54%)
 Frame = +3

Query: 474 EEQIQIRDSFVYDSLQELHEMGCVLVLWSYGSRDHVAHSMRNADLEGYFDIIISE 638
           E Q+   D +VY  LQ+ H++GCV V +  G    V ++  NA + G  D +I E
Sbjct: 794 ELQLNNGDEYVYRHLQKTHDVGCVEVTYQIG----VQNTYDNA-VVGLIDQLIRE 843


>U55372-1|AAA98002.2|  816|Caenorhabditis elegans Hypothetical
           protein C02G6.2 protein.
          Length = 816

 Score = 31.1 bits (67), Expect = 0.82
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +3

Query: 474 EEQIQIRDSFVYDSLQELHEMGCVLVLWSYG 566
           E Q+   D ++Y  LQ+ H+ GCV V + +G
Sbjct: 751 EFQLNNGDEYIYRHLQKTHDAGCVEVTFKFG 781


>U41029-3|AAF99952.2|  886|Caenorhabditis elegans Hypothetical
           protein F47G3.1 protein.
          Length = 886

 Score = 31.1 bits (67), Expect = 0.82
 Identities = 17/71 (23%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
 Frame = +3

Query: 303 PVLGHMCVLSNKPPMYSFLKEWFLLPHYKVVSLKSESLTWGFPHVVVFDLDSTLITEEEQ 482
           P+ GH+ ++  K      + +   +P Y  V  + + +TW F        DST +T+  +
Sbjct: 155 PIEGHVHIIPIKNNAVRLVPDLKYMPKYDYVEPEKKIMTWAFVDSCTALNDSTKLTDYSE 214

Query: 483 IQI--RDSFVY 509
           + +  R +FV+
Sbjct: 215 VGVDSRATFVF 225


>U88315-15|AAB42365.1|  351|Caenorhabditis elegans Annexin family
           protein 4 protein.
          Length = 351

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 10/35 (28%), Positives = 23/35 (65%)
 Frame = +3

Query: 3   GVTGPFLHIMASSLQSKWICLRLNDAIIKRHVLVL 107
           GV G  +H++  + + + + +R+ND ++ +HV +L
Sbjct: 157 GVVGKMMHLLLCNNREEGLGVRVNDELVDKHVKIL 191


>U55372-2|AAA98001.1|  980|Caenorhabditis elegans Hypothetical
           protein C02G6.1 protein.
          Length = 980

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 19/55 (34%), Positives = 28/55 (50%)
 Frame = +3

Query: 474 EEQIQIRDSFVYDSLQELHEMGCVLVLWSYGSRDHVAHSMRNADLEGYFDIIISE 638
           E Q+   D ++Y  LQ+ H+ GCV V +  G    V +   NA + G  D +I E
Sbjct: 724 EFQLNNGDEYIYRHLQKTHDAGCVEVTYQIG----VQNKYDNA-VVGLIDQLIKE 773


>Z93779-1|CAB07849.2| 2103|Caenorhabditis elegans Hypothetical
           protein T25C12.3 protein.
          Length = 2103

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
 Frame = +1

Query: 172 FNFATTRTCARL*KTTTITVCKYLKRPPTTCATSGTILNAHSKRQCWATCVC--LATNRQ 345
           FNF  T   + +   T+       + P TTC  +GT+LN  ++ Q   TC C  L   +Q
Sbjct: 280 FNFRRTGRFSCMQLLTSPAPPTTTQAPVTTCFNNGTLLNVANQGQ---TCFCSELFNGKQ 336

Query: 346 C 348
           C
Sbjct: 337 C 337


>Z78543-7|CAB01757.2| 2103|Caenorhabditis elegans Hypothetical
           protein T25C12.3 protein.
          Length = 2103

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
 Frame = +1

Query: 172 FNFATTRTCARL*KTTTITVCKYLKRPPTTCATSGTILNAHSKRQCWATCVC--LATNRQ 345
           FNF  T   + +   T+       + P TTC  +GT+LN  ++ Q   TC C  L   +Q
Sbjct: 280 FNFRRTGRFSCMQLLTSPAPPTTTQAPVTTCFNNGTLLNVANQGQ---TCFCSELFNGKQ 336

Query: 346 C 348
           C
Sbjct: 337 C 337


>Z66566-5|CAA91487.2| 2103|Caenorhabditis elegans Hypothetical
           protein T25C12.3 protein.
          Length = 2103

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
 Frame = +1

Query: 172 FNFATTRTCARL*KTTTITVCKYLKRPPTTCATSGTILNAHSKRQCWATCVC--LATNRQ 345
           FNF  T   + +   T+       + P TTC  +GT+LN  ++ Q   TC C  L   +Q
Sbjct: 280 FNFRRTGRFSCMQLLTSPAPPTTTQAPVTTCFNNGTLLNVANQGQ---TCFCSELFNGKQ 336

Query: 346 C 348
           C
Sbjct: 337 C 337


>Z81543-1|CAB04423.2|  543|Caenorhabditis elegans Hypothetical
           protein F49B2.1 protein.
          Length = 543

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 25/69 (36%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
 Frame = +3

Query: 498 SFVYDSLQELHEM-GCVLVLWSYGSRDHVAHSMRNA-DLEGYFDIIISEGSTVREERSDL 671
           SF +DS Q   E  G      S+GS D ++ SMR A  L    DII  EG  +   +S L
Sbjct: 123 SFDHDSEQFCKEFEGLKFRTLSFGSNDPLS-SMRTAISLSPQSDIIQLEGEDMSSAKSLL 181

Query: 672 VQNSHNAIV 698
           +QN+    +
Sbjct: 182 LQNTDEVYI 190


>Z79603-8|CAH04750.1|  137|Caenorhabditis elegans Hypothetical
           protein M163.8 protein.
          Length = 137

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 18/74 (24%), Positives = 29/74 (39%)
 Frame = +1

Query: 322 VCLATNRQCIRFLKNGFCCHTTKWSLSKANL*RGDFRTWSCSIWTALS*PKRSKFKFEIR 501
           +C+  N  C  ++ NGFC   T    S A   + ++   SC + +  S    S       
Sbjct: 20  MCMDVNPNCANWVSNGFC---TSSFYSDAQ--KTEYCPASCRLCSGASSTTSSSASSSSS 74

Query: 502 LCMTACRNCTKWVA 543
            C  +  NC  W +
Sbjct: 75  TCGDSNSNCASWAS 88


>AF022976-4|AAC69083.2|  345|Caenorhabditis elegans Serpentine
           receptor, class h protein37 protein.
          Length = 345

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
 Frame = +3

Query: 294 FKTPV--LGHMCVLSNKPPMYSFLKEWFLLPH 383
           F TP+  L H CVL+  P  +  LK W +  H
Sbjct: 26  FVTPIYPLAHYCVLTKSPKSFGILK-WIIYVH 56


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,743,243
Number of Sequences: 27780
Number of extensions: 401669
Number of successful extensions: 1093
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1045
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1093
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1666201324
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)