Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10a22
         (397 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_85| Best HMM Match : PWP2 (HMM E-Value=8.3e-27)                     45   3e-05
SB_23046| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.45 
SB_2556| Best HMM Match : No HMM Matches (HMM E-Value=.)               28   3.2  
SB_43709| Best HMM Match : NodZ (HMM E-Value=0.42)                     27   4.2  
SB_44231| Best HMM Match : Ion_trans_2 (HMM E-Value=6.5e-09)           27   5.5  
SB_29511| Best HMM Match : CHGN (HMM E-Value=0.00037)                  27   5.5  
SB_51854| Best HMM Match : 7tm_1 (HMM E-Value=1.3e-05)                 27   7.3  
SB_55895| Best HMM Match : ig (HMM E-Value=2.2e-05)                    27   7.3  
SB_6395| Best HMM Match : No HMM Matches (HMM E-Value=.)               27   7.3  
SB_29494| Best HMM Match : Mpp10 (HMM E-Value=0.62)                    26   9.6  
SB_13715| Best HMM Match : Peptidase_A17 (HMM E-Value=3.6e-10)         26   9.6  
SB_12902| Best HMM Match : No HMM Matches (HMM E-Value=.)              26   9.6  

>SB_85| Best HMM Match : PWP2 (HMM E-Value=8.3e-27)
          Length = 357

 Score = 44.8 bits (101), Expect = 3e-05
 Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 6/89 (6%)
 Frame = +3

Query: 6   LIQECLESVPTKDISLTVSSLDEDYGDRLLSTIARLLEDSRHVEQLLHWTTALVSTGRHK 185
           LI+E +ES+   DI L V +L + Y D+LL  ++  L+ S H++  L W   + +   H 
Sbjct: 136 LIKEVVESIKCSDIRLVVQALSDTYVDKLLWFVSGQLDTSAHLQFYLTWCQEIFTLHGHV 195

Query: 186 FPPSA------LLAVEKVLTVKYSQLSKI 254
               A      L  V+K LT  + +L K+
Sbjct: 196 IKQRAGDVMHMLRTVQKSLTRHHDELGKL 224


>SB_23046| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2708

 Score = 30.7 bits (66), Expect = 0.45
 Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
 Frame = +3

Query: 48  SLTVSSLDEDYGDRLLSTIARLLEDSRHVEQLLHWTTALVSTGRHKF-PPSALLAVEKVL 224
           S T+ S  E   D   STIA+ ++DS  VEQ+ +   A  S  R +     + L  +KV 
Sbjct: 624 SETLFSFLEILDDFNSSTIAKPMDDSSAVEQMEYQPLASTSDFRSELRAKDSDLTEQKVK 683

Query: 225 TVKYSQLSKICDFNKYTIRCIKTVGDVVLKR 317
           T + S    +C    + + CI      VL R
Sbjct: 684 TFQESHAEFLCQL-IWELLCILPTNHTVLNR 713


>SB_2556| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 275

 Score = 27.9 bits (59), Expect = 3.2
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = -1

Query: 397 FFFYDNNIFYSESEDVGPSVSMGSTSS 317
           FFFY NN+F S +E +  S+ +  TSS
Sbjct: 88  FFFYTNNLFESLAELLTVSLRLRGTSS 114


>SB_43709| Best HMM Match : NodZ (HMM E-Value=0.42)
          Length = 499

 Score = 27.5 bits (58), Expect = 4.2
 Identities = 16/42 (38%), Positives = 23/42 (54%)
 Frame = -1

Query: 313 FKTTSPTVFMHLIVYLLKSHILLNCEYLTVRTFSTASSALGG 188
           +  ++  VFM L+V  L   +LL C+Y      ST SSA+ G
Sbjct: 293 YSNSADAVFMDLLVDFL---LLLECDYFIGTRMSTYSSAVLG 331


>SB_44231| Best HMM Match : Ion_trans_2 (HMM E-Value=6.5e-09)
          Length = 441

 Score = 27.1 bits (57), Expect = 5.5
 Identities = 16/49 (32%), Positives = 27/49 (55%)
 Frame = +3

Query: 39  KDISLTVSSLDEDYGDRLLSTIARLLEDSRHVEQLLHWTTALVSTGRHK 185
           K + + +SS+ ED+   L STI RL E  RH + + ++   L    R++
Sbjct: 350 KILQVVMSSVVEDFHQNLTSTIERLRE--RHDQDMRNYIAILKKQRRNE 396


>SB_29511| Best HMM Match : CHGN (HMM E-Value=0.00037)
          Length = 955

 Score = 27.1 bits (57), Expect = 5.5
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +3

Query: 54  TVSSLDEDYGDRLLSTIARLLEDSR 128
           TV  L  D G+R+  T+ RLL D++
Sbjct: 521 TVEDLSRDNGERVHGTVRRLLSDNK 545


>SB_51854| Best HMM Match : 7tm_1 (HMM E-Value=1.3e-05)
          Length = 447

 Score = 26.6 bits (56), Expect = 7.3
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = -1

Query: 241 CEYLTVRTFSTASSALGGNLCLPVDTSAVV 152
           CEY+T +TF+  SS L  N    V    +V
Sbjct: 236 CEYVTCKTFAVFSSFLSVNFLAAVSVERLV 265


>SB_55895| Best HMM Match : ig (HMM E-Value=2.2e-05)
          Length = 420

 Score = 26.6 bits (56), Expect = 7.3
 Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
 Frame = +3

Query: 129 HVEQLLHWTTALVSTGRHKFPPSALLAVE-KVLTVKYSQ-LSKI 254
           H +++ H+   +  TGRHK P   +   E + L  KY + L+K+
Sbjct: 8   HSDEVFHFKILIQKTGRHKIPKYRVKESELETLIEKYKETLAKL 51


>SB_6395| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1093

 Score = 26.6 bits (56), Expect = 7.3
 Identities = 14/43 (32%), Positives = 25/43 (58%)
 Frame = +3

Query: 12  QECLESVPTKDISLTVSSLDEDYGDRLLSTIARLLEDSRHVEQ 140
           Q  +   PTKD SLT S ++E    R+L+   R+  + ++V++
Sbjct: 49  QPTVSPTPTKDASLTDSEINERV-QRILNGSGRVRRNPKYVQR 90


>SB_29494| Best HMM Match : Mpp10 (HMM E-Value=0.62)
          Length = 631

 Score = 26.2 bits (55), Expect = 9.6
 Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
 Frame = -3

Query: 200 RARRELVSPRRHERRGPVQQLLHVP-AVLEEARYRAQQPVAV 78
           R  R+  SPRR + +GPV   L +P   LEE   +  +P  V
Sbjct: 457 RNPRDRRSPRRTKPKGPVHSRLQLPQKSLEEEVIKISKPKPV 498


>SB_13715| Best HMM Match : Peptidase_A17 (HMM E-Value=3.6e-10)
          Length = 596

 Score = 26.2 bits (55), Expect = 9.6
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = -3

Query: 254 YFTQLRVFDGQNFLYGEQRARRELVSPRRHERR 156
           Y T LR F G     GE  +R+E +S     RR
Sbjct: 563 YLTSLRCFHGATGASGEHASRKETLSRSTARRR 595


>SB_12902| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1585

 Score = 26.2 bits (55), Expect = 9.6
 Identities = 12/49 (24%), Positives = 21/49 (42%)
 Frame = -1

Query: 376  IFYSESEDVGPSVSMGSTSSRFKTTSPTVFMHLIVYLLKSHILLNCEYL 230
            ++   S   G     G  +SRF      +  H    L+K H++ NC+ +
Sbjct: 1485 LYQRHSYRFGTKRDPGLVTSRFAAADRLLAAHCSSILVKRHVVANCKQI 1533


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,993,073
Number of Sequences: 59808
Number of extensions: 193802
Number of successful extensions: 590
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 536
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 590
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 690807992
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)