Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc10a22
(397 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X95263-1|CAA64560.1| 919|Homo sapiens PWP2 protein. 58 1e-08
U56089-1|AAC50905.1| 919|Homo sapiens periodic tryptophan prote... 58 1e-08
U56085-1|AAC50904.1| 919|Homo sapiens periodic tryptophan prote... 58 1e-08
U53346-1|AAB08084.1| 919|Homo sapiens PWP2H protein protein. 58 1e-08
BC014988-1|AAH14988.1| 919|Homo sapiens PWP2 periodic tryptopha... 58 1e-08
BC013309-1|AAH13309.1| 919|Homo sapiens PWP2 periodic tryptopha... 58 1e-08
AP001753-1|BAA95553.1| 919|Homo sapiens periodic tryptophan pro... 58 1e-08
AB001517-2|BAA21137.1| 919|Homo sapiens PWP2 protein protein. 58 1e-08
AL590005-3|CAI14988.1| 5457|Homo sapiens dystonin protein. 31 1.4
AL590005-2|CAI14989.1| 7543|Homo sapiens dystonin protein. 31 1.4
AL512448-3|CAI16610.1| 5144|Homo sapiens dystonin protein. 31 1.4
AL512448-2|CAI16608.1| 5457|Homo sapiens dystonin protein. 31 1.4
AL512448-1|CAI16609.1| 7543|Homo sapiens dystonin protein. 31 1.4
AL512422-3|CAI14342.1| 5457|Homo sapiens dystonin protein. 31 1.4
AL512422-2|CAI14341.1| 7543|Homo sapiens dystonin protein. 31 1.4
AL137008-4|CAI20332.1| 5144|Homo sapiens dystonin protein. 31 1.4
AL137008-3|CAI20331.1| 5457|Homo sapiens dystonin protein. 31 1.4
AL137008-2|CAI20330.1| 7543|Homo sapiens dystonin protein. 31 1.4
AL096710-4|CAI22045.1| 5144|Homo sapiens dystonin protein. 31 1.4
AL096710-3|CAI22043.1| 5457|Homo sapiens dystonin protein. 31 1.4
AL096710-2|CAI22044.1| 7543|Homo sapiens dystonin protein. 31 1.4
AK055189-1|BAB70870.1| 1174|Homo sapiens protein ( Homo sapiens ... 31 1.4
AF400226-1|AAL62061.1| 5171|Homo sapiens bullous pemphigoid anti... 31 1.4
AK090863-1|BAC03533.1| 160|Homo sapiens protein ( Homo sapiens ... 29 7.4
DQ264729-1|ABB72674.1| 1132|Homo sapiens telomerase reverse tran... 28 9.7
AY007685-1|AAG23289.1| 1132|Homo sapiens telomerase catalytic su... 28 9.7
AF128894-1|AAD30037.1| 1132|Homo sapiens telomerase reverse tran... 28 9.7
AF018167-1|AAC51724.1| 1132|Homo sapiens telomerase catalytic su... 28 9.7
AF015950-1|AAC51672.1| 1132|Homo sapiens telomerase reverse tran... 28 9.7
AB086950-1|BAC11015.1| 795|Homo sapiens ABG-deleted variant of ... 28 9.7
AB086379-1|BAC11014.1| 807|Homo sapiens beta and gamma deletion... 28 9.7
AB085628-1|BAC11010.1| 1069|Homo sapiens telomerase reverse tran... 28 9.7
>X95263-1|CAA64560.1| 919|Homo sapiens PWP2 protein.
Length = 919
Score = 57.6 bits (133), Expect = 1e-08
Identities = 38/119 (31%), Positives = 60/119 (50%), Gaps = 6/119 (5%)
Frame = +3
Query: 6 LIQECLESVPTKDISLTVSSLDEDYGDRLLSTIARLLEDSRHVEQLLHWTTALVSTGRHK 185
L+QE LE+VP +I + SSL E Y +++L +A E SRH+E L WT L+ K
Sbjct: 774 LVQEALEAVPRGEIEVVTSSLPELYVEKVLEFLASSFEVSRHLEFYLLWTHKLLMLHGQK 833
Query: 186 FPPSA--LLAV----EKVLTVKYSQLSKICDFNKYTIRCIKTVGDVVLKREEVEPMDTD 344
A LL V +K + LSK+C +N Y ++ V + ++P+ ++
Sbjct: 834 LKSRAGTLLPVIQFLQKSIQRHLDDLSKLCSWNHYNMQYALAVSKQRGTKRSLDPLGSE 892
>U56089-1|AAC50905.1| 919|Homo sapiens periodic tryptophan protein 2
protein.
Length = 919
Score = 57.6 bits (133), Expect = 1e-08
Identities = 38/119 (31%), Positives = 60/119 (50%), Gaps = 6/119 (5%)
Frame = +3
Query: 6 LIQECLESVPTKDISLTVSSLDEDYGDRLLSTIARLLEDSRHVEQLLHWTTALVSTGRHK 185
L+QE LE+VP +I + SSL E Y +++L +A E SRH+E L WT L+ K
Sbjct: 774 LVQEALEAVPRGEIEVVTSSLPELYVEKVLEFLASSFEVSRHLEFYLLWTHKLLMLHGQK 833
Query: 186 FPPSA--LLAV----EKVLTVKYSQLSKICDFNKYTIRCIKTVGDVVLKREEVEPMDTD 344
A LL V +K + LSK+C +N Y ++ V + ++P+ ++
Sbjct: 834 LKSRAGTLLPVIQFLQKSIQRHLDDLSKLCSWNHYNMQYALAVSKQRGTKRSLDPLGSE 892
>U56085-1|AAC50904.1| 919|Homo sapiens periodic tryptophan protein 2
protein.
Length = 919
Score = 57.6 bits (133), Expect = 1e-08
Identities = 38/119 (31%), Positives = 60/119 (50%), Gaps = 6/119 (5%)
Frame = +3
Query: 6 LIQECLESVPTKDISLTVSSLDEDYGDRLLSTIARLLEDSRHVEQLLHWTTALVSTGRHK 185
L+QE LE+VP +I + SSL E Y +++L +A E SRH+E L WT L+ K
Sbjct: 774 LVQEALEAVPRGEIEVVTSSLPELYVEKVLEFLASSFEVSRHLEFYLLWTHKLLMLHGQK 833
Query: 186 FPPSA--LLAV----EKVLTVKYSQLSKICDFNKYTIRCIKTVGDVVLKREEVEPMDTD 344
A LL V +K + LSK+C +N Y ++ V + ++P+ ++
Sbjct: 834 LKSRAGTLLPVIQFLQKSIQRHLDDLSKLCSWNHYNMQYALAVSKQRGTKRSLDPLGSE 892
>U53346-1|AAB08084.1| 919|Homo sapiens PWP2H protein protein.
Length = 919
Score = 57.6 bits (133), Expect = 1e-08
Identities = 38/119 (31%), Positives = 60/119 (50%), Gaps = 6/119 (5%)
Frame = +3
Query: 6 LIQECLESVPTKDISLTVSSLDEDYGDRLLSTIARLLEDSRHVEQLLHWTTALVSTGRHK 185
L+QE LE+VP +I + SSL E Y +++L +A E SRH+E L WT L+ K
Sbjct: 774 LVQEALEAVPRGEIEVVTSSLPELYVEKVLEFLASSFEVSRHLEFYLLWTHKLLMLHGQK 833
Query: 186 FPPSA--LLAV----EKVLTVKYSQLSKICDFNKYTIRCIKTVGDVVLKREEVEPMDTD 344
A LL V +K + LSK+C +N Y ++ V + ++P+ ++
Sbjct: 834 LKSRAGTLLPVIQFLQKSIQRHLDDLSKLCSWNHYNMQYALAVSKQRGTKRSLDPLGSE 892
>BC014988-1|AAH14988.1| 919|Homo sapiens PWP2 periodic tryptophan
protein homolog (yeast) protein.
Length = 919
Score = 57.6 bits (133), Expect = 1e-08
Identities = 38/119 (31%), Positives = 60/119 (50%), Gaps = 6/119 (5%)
Frame = +3
Query: 6 LIQECLESVPTKDISLTVSSLDEDYGDRLLSTIARLLEDSRHVEQLLHWTTALVSTGRHK 185
L+QE LE+VP +I + SSL E Y +++L +A E SRH+E L WT L+ K
Sbjct: 774 LVQEALEAVPRGEIEVVTSSLPELYVEKVLEFLASSFEVSRHLEFYLLWTHKLLMLHGQK 833
Query: 186 FPPSA--LLAV----EKVLTVKYSQLSKICDFNKYTIRCIKTVGDVVLKREEVEPMDTD 344
A LL V +K + LSK+C +N Y ++ V + ++P+ ++
Sbjct: 834 LKSRAGTLLPVIQFLQKSIQRHLDDLSKLCSWNHYNMQYALAVSKQRGTKRSLDPLGSE 892
>BC013309-1|AAH13309.1| 919|Homo sapiens PWP2 periodic tryptophan
protein homolog (yeast) protein.
Length = 919
Score = 57.6 bits (133), Expect = 1e-08
Identities = 38/119 (31%), Positives = 60/119 (50%), Gaps = 6/119 (5%)
Frame = +3
Query: 6 LIQECLESVPTKDISLTVSSLDEDYGDRLLSTIARLLEDSRHVEQLLHWTTALVSTGRHK 185
L+QE LE+VP +I + SSL E Y +++L +A E SRH+E L WT L+ K
Sbjct: 774 LVQEALEAVPRGEIEVVTSSLPELYVEKVLEFLASSFEVSRHLEFYLLWTHKLLMLHGQK 833
Query: 186 FPPSA--LLAV----EKVLTVKYSQLSKICDFNKYTIRCIKTVGDVVLKREEVEPMDTD 344
A LL V +K + LSK+C +N Y ++ V + ++P+ ++
Sbjct: 834 LKSRAGTLLPVIQFLQKSIQRHLDDLSKLCSWNHYNMQYALAVSKQRGTKRSLDPLGSE 892
>AP001753-1|BAA95553.1| 919|Homo sapiens periodic tryptophan protein
2 homolog protein.
Length = 919
Score = 57.6 bits (133), Expect = 1e-08
Identities = 38/119 (31%), Positives = 60/119 (50%), Gaps = 6/119 (5%)
Frame = +3
Query: 6 LIQECLESVPTKDISLTVSSLDEDYGDRLLSTIARLLEDSRHVEQLLHWTTALVSTGRHK 185
L+QE LE+VP +I + SSL E Y +++L +A E SRH+E L WT L+ K
Sbjct: 774 LVQEALEAVPRGEIEVVTSSLPELYVEKVLEFLASSFEVSRHLEFYLLWTHKLLMLHGQK 833
Query: 186 FPPSA--LLAV----EKVLTVKYSQLSKICDFNKYTIRCIKTVGDVVLKREEVEPMDTD 344
A LL V +K + LSK+C +N Y ++ V + ++P+ ++
Sbjct: 834 LKSRAGTLLPVIQFLQKSIQRHLDDLSKLCSWNHYNMQYALAVSKQRGTKRSLDPLGSE 892
>AB001517-2|BAA21137.1| 919|Homo sapiens PWP2 protein protein.
Length = 919
Score = 57.6 bits (133), Expect = 1e-08
Identities = 38/119 (31%), Positives = 60/119 (50%), Gaps = 6/119 (5%)
Frame = +3
Query: 6 LIQECLESVPTKDISLTVSSLDEDYGDRLLSTIARLLEDSRHVEQLLHWTTALVSTGRHK 185
L+QE LE+VP +I + SSL E Y +++L +A E SRH+E L WT L+ K
Sbjct: 774 LVQEALEAVPRGEIEVVTSSLPELYVEKVLEFLASSFEVSRHLEFYLLWTHKLLMLHGQK 833
Query: 186 FPPSA--LLAV----EKVLTVKYSQLSKICDFNKYTIRCIKTVGDVVLKREEVEPMDTD 344
A LL V +K + LSK+C +N Y ++ V + ++P+ ++
Sbjct: 834 LKSRAGTLLPVIQFLQKSIQRHLDDLSKLCSWNHYNMQYALAVSKQRGTKRSLDPLGSE 892
>AL590005-3|CAI14988.1| 5457|Homo sapiens dystonin protein.
Length = 5457
Score = 31.1 bits (67), Expect = 1.4
Identities = 24/97 (24%), Positives = 38/97 (39%), Gaps = 3/97 (3%)
Frame = +3
Query: 42 DISLTVSSLDEDYGDRLLSTIARLLEDSRH---VEQLLHWTTALVSTGRHKFPPSALLAV 212
D++ +L++ R LL R +E LL W ++ PPSA V
Sbjct: 3282 DVNARWKTLNKKVAQRAAQLQEALLHCGRFQDALESLLSWMVDTEELVANQKPPSAEFKV 3341
Query: 213 EKVLTVKYSQLSKICDFNKYTIRCIKTVGDVVLKREE 323
K + L ++ D K T+ IK G+ + E
Sbjct: 3342 VKAQIQEQKLLQRLLDDRKSTVEVIKREGEKIATTAE 3378
>AL590005-2|CAI14989.1| 7543|Homo sapiens dystonin protein.
Length = 7543
Score = 31.1 bits (67), Expect = 1.4
Identities = 24/97 (24%), Positives = 38/97 (39%), Gaps = 3/97 (3%)
Frame = +3
Query: 42 DISLTVSSLDEDYGDRLLSTIARLLEDSRH---VEQLLHWTTALVSTGRHKFPPSALLAV 212
D++ +L++ R LL R +E LL W ++ PPSA V
Sbjct: 5368 DVNARWKTLNKKVAQRAAQLQEALLHCGRFQDALESLLSWMVDTEELVANQKPPSAEFKV 5427
Query: 213 EKVLTVKYSQLSKICDFNKYTIRCIKTVGDVVLKREE 323
K + L ++ D K T+ IK G+ + E
Sbjct: 5428 VKAQIQEQKLLQRLLDDRKSTVEVIKREGEKIATTAE 5464
>AL512448-3|CAI16610.1| 5144|Homo sapiens dystonin protein.
Length = 5144
Score = 31.1 bits (67), Expect = 1.4
Identities = 24/97 (24%), Positives = 38/97 (39%), Gaps = 3/97 (3%)
Frame = +3
Query: 42 DISLTVSSLDEDYGDRLLSTIARLLEDSRH---VEQLLHWTTALVSTGRHKFPPSALLAV 212
D++ +L++ R LL R +E LL W ++ PPSA V
Sbjct: 2956 DVNARWKTLNKKVAQRAAQLQEALLHCGRFQDALESLLSWMVDTEELVANQKPPSAEFKV 3015
Query: 213 EKVLTVKYSQLSKICDFNKYTIRCIKTVGDVVLKREE 323
K + L ++ D K T+ IK G+ + E
Sbjct: 3016 VKAQIQEQKLLQRLLDDRKSTVEVIKREGEKIATTAE 3052
>AL512448-2|CAI16608.1| 5457|Homo sapiens dystonin protein.
Length = 5457
Score = 31.1 bits (67), Expect = 1.4
Identities = 24/97 (24%), Positives = 38/97 (39%), Gaps = 3/97 (3%)
Frame = +3
Query: 42 DISLTVSSLDEDYGDRLLSTIARLLEDSRH---VEQLLHWTTALVSTGRHKFPPSALLAV 212
D++ +L++ R LL R +E LL W ++ PPSA V
Sbjct: 3282 DVNARWKTLNKKVAQRAAQLQEALLHCGRFQDALESLLSWMVDTEELVANQKPPSAEFKV 3341
Query: 213 EKVLTVKYSQLSKICDFNKYTIRCIKTVGDVVLKREE 323
K + L ++ D K T+ IK G+ + E
Sbjct: 3342 VKAQIQEQKLLQRLLDDRKSTVEVIKREGEKIATTAE 3378
>AL512448-1|CAI16609.1| 7543|Homo sapiens dystonin protein.
Length = 7543
Score = 31.1 bits (67), Expect = 1.4
Identities = 24/97 (24%), Positives = 38/97 (39%), Gaps = 3/97 (3%)
Frame = +3
Query: 42 DISLTVSSLDEDYGDRLLSTIARLLEDSRH---VEQLLHWTTALVSTGRHKFPPSALLAV 212
D++ +L++ R LL R +E LL W ++ PPSA V
Sbjct: 5368 DVNARWKTLNKKVAQRAAQLQEALLHCGRFQDALESLLSWMVDTEELVANQKPPSAEFKV 5427
Query: 213 EKVLTVKYSQLSKICDFNKYTIRCIKTVGDVVLKREE 323
K + L ++ D K T+ IK G+ + E
Sbjct: 5428 VKAQIQEQKLLQRLLDDRKSTVEVIKREGEKIATTAE 5464
>AL512422-3|CAI14342.1| 5457|Homo sapiens dystonin protein.
Length = 5457
Score = 31.1 bits (67), Expect = 1.4
Identities = 24/97 (24%), Positives = 38/97 (39%), Gaps = 3/97 (3%)
Frame = +3
Query: 42 DISLTVSSLDEDYGDRLLSTIARLLEDSRH---VEQLLHWTTALVSTGRHKFPPSALLAV 212
D++ +L++ R LL R +E LL W ++ PPSA V
Sbjct: 3282 DVNARWKTLNKKVAQRAAQLQEALLHCGRFQDALESLLSWMVDTEELVANQKPPSAEFKV 3341
Query: 213 EKVLTVKYSQLSKICDFNKYTIRCIKTVGDVVLKREE 323
K + L ++ D K T+ IK G+ + E
Sbjct: 3342 VKAQIQEQKLLQRLLDDRKSTVEVIKREGEKIATTAE 3378
>AL512422-2|CAI14341.1| 7543|Homo sapiens dystonin protein.
Length = 7543
Score = 31.1 bits (67), Expect = 1.4
Identities = 24/97 (24%), Positives = 38/97 (39%), Gaps = 3/97 (3%)
Frame = +3
Query: 42 DISLTVSSLDEDYGDRLLSTIARLLEDSRH---VEQLLHWTTALVSTGRHKFPPSALLAV 212
D++ +L++ R LL R +E LL W ++ PPSA V
Sbjct: 5368 DVNARWKTLNKKVAQRAAQLQEALLHCGRFQDALESLLSWMVDTEELVANQKPPSAEFKV 5427
Query: 213 EKVLTVKYSQLSKICDFNKYTIRCIKTVGDVVLKREE 323
K + L ++ D K T+ IK G+ + E
Sbjct: 5428 VKAQIQEQKLLQRLLDDRKSTVEVIKREGEKIATTAE 5464
>AL137008-4|CAI20332.1| 5144|Homo sapiens dystonin protein.
Length = 5144
Score = 31.1 bits (67), Expect = 1.4
Identities = 24/97 (24%), Positives = 38/97 (39%), Gaps = 3/97 (3%)
Frame = +3
Query: 42 DISLTVSSLDEDYGDRLLSTIARLLEDSRH---VEQLLHWTTALVSTGRHKFPPSALLAV 212
D++ +L++ R LL R +E LL W ++ PPSA V
Sbjct: 2956 DVNARWKTLNKKVAQRAAQLQEALLHCGRFQDALESLLSWMVDTEELVANQKPPSAEFKV 3015
Query: 213 EKVLTVKYSQLSKICDFNKYTIRCIKTVGDVVLKREE 323
K + L ++ D K T+ IK G+ + E
Sbjct: 3016 VKAQIQEQKLLQRLLDDRKSTVEVIKREGEKIATTAE 3052
>AL137008-3|CAI20331.1| 5457|Homo sapiens dystonin protein.
Length = 5457
Score = 31.1 bits (67), Expect = 1.4
Identities = 24/97 (24%), Positives = 38/97 (39%), Gaps = 3/97 (3%)
Frame = +3
Query: 42 DISLTVSSLDEDYGDRLLSTIARLLEDSRH---VEQLLHWTTALVSTGRHKFPPSALLAV 212
D++ +L++ R LL R +E LL W ++ PPSA V
Sbjct: 3282 DVNARWKTLNKKVAQRAAQLQEALLHCGRFQDALESLLSWMVDTEELVANQKPPSAEFKV 3341
Query: 213 EKVLTVKYSQLSKICDFNKYTIRCIKTVGDVVLKREE 323
K + L ++ D K T+ IK G+ + E
Sbjct: 3342 VKAQIQEQKLLQRLLDDRKSTVEVIKREGEKIATTAE 3378
>AL137008-2|CAI20330.1| 7543|Homo sapiens dystonin protein.
Length = 7543
Score = 31.1 bits (67), Expect = 1.4
Identities = 24/97 (24%), Positives = 38/97 (39%), Gaps = 3/97 (3%)
Frame = +3
Query: 42 DISLTVSSLDEDYGDRLLSTIARLLEDSRH---VEQLLHWTTALVSTGRHKFPPSALLAV 212
D++ +L++ R LL R +E LL W ++ PPSA V
Sbjct: 5368 DVNARWKTLNKKVAQRAAQLQEALLHCGRFQDALESLLSWMVDTEELVANQKPPSAEFKV 5427
Query: 213 EKVLTVKYSQLSKICDFNKYTIRCIKTVGDVVLKREE 323
K + L ++ D K T+ IK G+ + E
Sbjct: 5428 VKAQIQEQKLLQRLLDDRKSTVEVIKREGEKIATTAE 5464
>AL096710-4|CAI22045.1| 5144|Homo sapiens dystonin protein.
Length = 5144
Score = 31.1 bits (67), Expect = 1.4
Identities = 24/97 (24%), Positives = 38/97 (39%), Gaps = 3/97 (3%)
Frame = +3
Query: 42 DISLTVSSLDEDYGDRLLSTIARLLEDSRH---VEQLLHWTTALVSTGRHKFPPSALLAV 212
D++ +L++ R LL R +E LL W ++ PPSA V
Sbjct: 2956 DVNARWKTLNKKVAQRAAQLQEALLHCGRFQDALESLLSWMVDTEELVANQKPPSAEFKV 3015
Query: 213 EKVLTVKYSQLSKICDFNKYTIRCIKTVGDVVLKREE 323
K + L ++ D K T+ IK G+ + E
Sbjct: 3016 VKAQIQEQKLLQRLLDDRKSTVEVIKREGEKIATTAE 3052
>AL096710-3|CAI22043.1| 5457|Homo sapiens dystonin protein.
Length = 5457
Score = 31.1 bits (67), Expect = 1.4
Identities = 24/97 (24%), Positives = 38/97 (39%), Gaps = 3/97 (3%)
Frame = +3
Query: 42 DISLTVSSLDEDYGDRLLSTIARLLEDSRH---VEQLLHWTTALVSTGRHKFPPSALLAV 212
D++ +L++ R LL R +E LL W ++ PPSA V
Sbjct: 3282 DVNARWKTLNKKVAQRAAQLQEALLHCGRFQDALESLLSWMVDTEELVANQKPPSAEFKV 3341
Query: 213 EKVLTVKYSQLSKICDFNKYTIRCIKTVGDVVLKREE 323
K + L ++ D K T+ IK G+ + E
Sbjct: 3342 VKAQIQEQKLLQRLLDDRKSTVEVIKREGEKIATTAE 3378
>AL096710-2|CAI22044.1| 7543|Homo sapiens dystonin protein.
Length = 7543
Score = 31.1 bits (67), Expect = 1.4
Identities = 24/97 (24%), Positives = 38/97 (39%), Gaps = 3/97 (3%)
Frame = +3
Query: 42 DISLTVSSLDEDYGDRLLSTIARLLEDSRH---VEQLLHWTTALVSTGRHKFPPSALLAV 212
D++ +L++ R LL R +E LL W ++ PPSA V
Sbjct: 5368 DVNARWKTLNKKVAQRAAQLQEALLHCGRFQDALESLLSWMVDTEELVANQKPPSAEFKV 5427
Query: 213 EKVLTVKYSQLSKICDFNKYTIRCIKTVGDVVLKREE 323
K + L ++ D K T+ IK G+ + E
Sbjct: 5428 VKAQIQEQKLLQRLLDDRKSTVEVIKREGEKIATTAE 5464
>AK055189-1|BAB70870.1| 1174|Homo sapiens protein ( Homo sapiens
cDNA FLJ30627 fis, clone CTONG2001955, moderately
similar to Homo sapiens mRNA for actin binding protein
ABP620. ).
Length = 1174
Score = 31.1 bits (67), Expect = 1.4
Identities = 24/97 (24%), Positives = 38/97 (39%), Gaps = 3/97 (3%)
Frame = +3
Query: 42 DISLTVSSLDEDYGDRLLSTIARLLEDSRH---VEQLLHWTTALVSTGRHKFPPSALLAV 212
D++ +L++ R LL R +E LL W ++ PPSA V
Sbjct: 515 DVNARWKTLNKKVAQRAAQLQEALLHCGRFQDALESLLSWMVDTEELVANQKPPSAEFKV 574
Query: 213 EKVLTVKYSQLSKICDFNKYTIRCIKTVGDVVLKREE 323
K + L ++ D K T+ IK G+ + E
Sbjct: 575 VKAQIQEQKLLQRLLDDRKSTVEVIKREGEKIATTAE 611
>AF400226-1|AAL62061.1| 5171|Homo sapiens bullous pemphigoid antigen 1
eA protein.
Length = 5171
Score = 31.1 bits (67), Expect = 1.4
Identities = 24/97 (24%), Positives = 38/97 (39%), Gaps = 3/97 (3%)
Frame = +3
Query: 42 DISLTVSSLDEDYGDRLLSTIARLLEDSRH---VEQLLHWTTALVSTGRHKFPPSALLAV 212
D++ +L++ R LL R +E LL W ++ PPSA V
Sbjct: 2956 DVNARWKTLNKKVAQRAAQLQEALLHCGRFQDALESLLSWMVDTEELVANQKPPSAEFKV 3015
Query: 213 EKVLTVKYSQLSKICDFNKYTIRCIKTVGDVVLKREE 323
K + L ++ D K T+ IK G+ + E
Sbjct: 3016 VKAQIQEQKLLQRLLDDRKSTVEVIKREGEKIATTAE 3052
>AK090863-1|BAC03533.1| 160|Homo sapiens protein ( Homo sapiens
cDNA FLJ33544 fis, clone BRAMY2008333. ).
Length = 160
Score = 28.7 bits (61), Expect = 7.4
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = -3
Query: 215 LYGEQRAR-RELVSPRRHERRGPVQQLLHVPAVLEEARYRAQ 93
L GE+ A +EL + +RH G +QLL L+EAR ++Q
Sbjct: 12 LRGEENAEGQELRASKRHPNLGCARQLLSQGENLQEARCKSQ 53
>DQ264729-1|ABB72674.1| 1132|Homo sapiens telomerase reverse
transcriptase protein.
Length = 1132
Score = 28.3 bits (60), Expect = 9.7
Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = -2
Query: 396 FFFMTITYFIQNQRTLVRQCPWAQLLLV-LRPHLRR 292
FF++T T F +N+ R+ W++L + +R HL+R
Sbjct: 560 FFYVTETTFQKNRLFFYRKSVWSKLQSIGIRQHLKR 595
>AY007685-1|AAG23289.1| 1132|Homo sapiens telomerase catalytic
subunit protein.
Length = 1132
Score = 28.3 bits (60), Expect = 9.7
Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = -2
Query: 396 FFFMTITYFIQNQRTLVRQCPWAQLLLV-LRPHLRR 292
FF++T T F +N+ R+ W++L + +R HL+R
Sbjct: 560 FFYVTETTFQKNRLFFYRKSVWSKLQSIGIRQHLKR 595
>AF128894-1|AAD30037.1| 1132|Homo sapiens telomerase reverse
transcriptase protein.
Length = 1132
Score = 28.3 bits (60), Expect = 9.7
Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = -2
Query: 396 FFFMTITYFIQNQRTLVRQCPWAQLLLV-LRPHLRR 292
FF++T T F +N+ R+ W++L + +R HL+R
Sbjct: 560 FFYVTETTFQKNRLFFYRKSVWSKLQSIGIRQHLKR 595
>AF018167-1|AAC51724.1| 1132|Homo sapiens telomerase catalytic
subunit protein.
Length = 1132
Score = 28.3 bits (60), Expect = 9.7
Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = -2
Query: 396 FFFMTITYFIQNQRTLVRQCPWAQLLLV-LRPHLRR 292
FF++T T F +N+ R+ W++L + +R HL+R
Sbjct: 560 FFYVTETTFQKNRLFFYRKSVWSKLQSIGIRQHLKR 595
>AF015950-1|AAC51672.1| 1132|Homo sapiens telomerase reverse
transcriptase protein.
Length = 1132
Score = 28.3 bits (60), Expect = 9.7
Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = -2
Query: 396 FFFMTITYFIQNQRTLVRQCPWAQLLLV-LRPHLRR 292
FF++T T F +N+ R+ W++L + +R HL+R
Sbjct: 560 FFYVTETTFQKNRLFFYRKSVWSKLQSIGIRQHLKR 595
>AB086950-1|BAC11015.1| 795|Homo sapiens ABG-deleted variant of
telomerase reverse transcriptase protein.
Length = 795
Score = 28.3 bits (60), Expect = 9.7
Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = -2
Query: 396 FFFMTITYFIQNQRTLVRQCPWAQLLLV-LRPHLRR 292
FF++T T F +N+ R+ W++L + +R HL+R
Sbjct: 560 FFYVTETTFQKNRLFFYRKSVWSKLQSIGIRQHLKR 595
>AB086379-1|BAC11014.1| 807|Homo sapiens beta and gamma deletion
isoform of telomerase reverse transcriptase protein.
Length = 807
Score = 28.3 bits (60), Expect = 9.7
Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = -2
Query: 396 FFFMTITYFIQNQRTLVRQCPWAQLLLV-LRPHLRR 292
FF++T T F +N+ R+ W++L + +R HL+R
Sbjct: 560 FFYVTETTFQKNRLFFYRKSVWSKLQSIGIRQHLKR 595
>AB085628-1|BAC11010.1| 1069|Homo sapiens telomerase reverse
transcriptase protein.
Length = 1069
Score = 28.3 bits (60), Expect = 9.7
Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = -2
Query: 396 FFFMTITYFIQNQRTLVRQCPWAQLLLV-LRPHLRR 292
FF++T T F +N+ R+ W++L + +R HL+R
Sbjct: 560 FFYVTETTFQKNRLFFYRKSVWSKLQSIGIRQHLKR 595
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,065,246
Number of Sequences: 237096
Number of extensions: 873354
Number of successful extensions: 3200
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 3085
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3192
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2813442310
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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