Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc10a19
(665 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1703.13c |||inorganic phosphate transporter |Schizosaccharom... 157 2e-39
SPBC27B12.09c |||FAD transporter|Schizosaccharomyces pombe|chr 2... 46 6e-06
SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|c... 44 2e-05
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 41 2e-04
SPAC823.10c |||mitochondrial carrier with solute carrier repeats... 38 0.001
SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar... 38 0.001
SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz... 36 0.005
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 36 0.007
SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c... 34 0.016
SPBC29A3.11c |||mitochondrial carboxylic acid transporter|Schizo... 33 0.028
SPAC4G9.20c |||mitochondrial carrier with solute carrier repeats... 31 0.11
SPBC1271.11 |||tricarboxylate transporter |Schizosaccharomyces p... 31 0.20
SPBP23A10.06 |||manganese ion transporter |Schizosaccharomyces p... 29 0.60
SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|ch... 29 0.60
SPAC2F7.08c |snf5||chromatin remodeling complex subunit Snf5 |Sc... 29 0.80
SPCC645.06c |rgf3|lad1|RhoGEF Rgf3|Schizosaccharomyces pombe|chr... 28 1.1
SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier homolog|Schizosaccha... 27 3.2
SPAC3G6.01 |hrp3||ATP-dependent DNA helicase Hrp3|Schizosaccharo... 27 3.2
SPCC16C4.14c |sfc4||transcription factor TFIIIC complex subunit ... 27 3.2
SPBC428.08c |clr4||histone H3 methyltransferase Clr4|Schizosacch... 26 4.2
SPAC12B10.09 |||S-adenosylmethionine transporter |Schizosaccharo... 26 4.2
SPBC1604.04 |||thiamine pyrophosphate transporter|Schizosaccharo... 26 4.2
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ... 26 5.6
SPCC31H12.07 |sec231|sec23a, SPCC5E4.01|GTPase activating protei... 25 9.8
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 25 9.8
SPAC1002.05c |jmj2||histone demethylase Jmj2 |Schizosaccharomyce... 25 9.8
SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar... 25 9.8
>SPBC1703.13c |||inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 311
Score = 157 bits (380), Expect = 2e-39
Identities = 76/155 (49%), Positives = 102/155 (65%), Gaps = 1/155 (0%)
Frame = +3
Query: 201 AVPTESCEFGSPKYFAXXXXXXXXXXXXTHTAVVPLDLVKCRLQVDAEKYKNVVNGFKVS 380
A P ++ + +P+Y+ TH+A+ PLDL+KCR QV+ Y + GFK
Sbjct: 9 APPKKTLQLYTPQYYGLCTLGGLLACGTTHSAITPLDLIKCRKQVNPNIYPGNIAGFKTI 68
Query: 381 VREEGVRGLAKGWAPTFIGYSMQGLCKFGFYEVFKVAYAGMLDDETAYTYRTFVYLAASA 560
+ +EG+RGL G PT IGYS+QG K+GFYE+FK Y+ ++ + A+ YRT +YLAASA
Sbjct: 69 LSKEGLRGLYTGGMPTLIGYSLQGCGKYGFYELFKHKYSTLVGAQKAHEYRTSIYLAASA 128
Query: 561 SAEFIADIALSPMEAAKVRIQTM-PGFASTLREAW 662
SAE +ADI L PMEA KVR+QT P FA+T REAW
Sbjct: 129 SAELLADIMLCPMEAIKVRVQTSNPRFANTTREAW 163
>SPBC27B12.09c |||FAD transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 277
Score = 45.6 bits (103), Expect = 6e-06
Identities = 32/109 (29%), Positives = 55/109 (50%)
Frame = +3
Query: 303 PLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGFYEVF 482
P+ +VK R+ Y N GF ++ EG+RG G+AP+ +G S QG +F YE
Sbjct: 118 PIWVVKSRILSKRVNYTNPFFGFYDLIKNEGLRGCYAGFAPSLLGVS-QGALQFMAYEKL 176
Query: 483 KVAYAGMLDDETAYTYRTFVYLAASASAEFIADIALSPMEAAKVRIQTM 629
K L + T ++++ SA+++ A + + P+ + R+Q M
Sbjct: 177 K------LWKQRRPTSLDYIFM--SAASKVFAAVNMYPLLVIRTRLQVM 217
Score = 31.5 bits (68), Expect = 0.11
Identities = 17/58 (29%), Positives = 30/58 (51%)
Frame = +3
Query: 303 PLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGFYE 476
PL +++ RLQV +++++N + R +G+ G KG+ P + Q F YE
Sbjct: 206 PLLVIRTRLQVMRSPHRSIMNLVLQTWRLQGILGFYKGFLPHLLRVVPQTCITFLVYE 263
>SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 320
Score = 44.0 bits (99), Expect = 2e-05
Identities = 33/122 (27%), Positives = 54/122 (44%), Gaps = 10/122 (8%)
Frame = +3
Query: 291 TAVVPLDLVKCRLQV-------DAEK--YKNVVNGFKVSVREEGVRGLAKGWAPTFIGYS 443
T P +++K R Q+ D K YK+V F + R EG+RGL +G ++
Sbjct: 39 TLTNPFEVIKTRFQLQGQLTKLDPSKRIYKSVGQAFSLIARHEGIRGLQRGLGTAYVYQI 98
Query: 444 MQGLCKFGFYE-VFKVAYAGMLDDETAYTYRTFVYLAASASAEFIADIALSPMEAAKVRI 620
C+ GFYE + + LDD + + +A+ A + + SP K R+
Sbjct: 99 CLNGCRLGFYEPIRRTLNTWFLDDPKG--NKLAINVASGAGSGLCGALFGSPFFLVKTRM 156
Query: 621 QT 626
Q+
Sbjct: 157 QS 158
Score = 27.9 bits (59), Expect = 1.4
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 8/46 (17%)
Frame = +3
Query: 303 PLDLVKCRLQVDAEK--------YKNVVNGFKVSVREEGVRGLAKG 416
P LVK R+Q + K YK++ N F ++E GV+GL G
Sbjct: 148 PFFLVKTRMQSYSPKFPVGQQYGYKHIFNAFSRIIKENGVKGLFVG 193
>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 40.7 bits (91), Expect = 2e-04
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Frame = +3
Query: 285 THTAVVPLDLVKCRLQVD-----AEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQ 449
T A P+ LVK RLQ+D A +Y++ ++ ++R EG RGL KG + + +G +
Sbjct: 176 TSAATNPIWLVKTRLQLDKKSGQAAQYRSSIDCIIKTIRLEGFRGLYKGLSASLLGVG-E 234
Query: 450 GLCKFGFYEVFKVAYA 497
++ YE FK A A
Sbjct: 235 STLQWVLYEKFKHAVA 250
Score = 26.2 bits (55), Expect = 4.2
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +3
Query: 345 KYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGFYEV 479
KY ++ FK+ E+G+ GL G + FG YEV
Sbjct: 311 KYTGLIQCFKLVWMEQGIVGLYGGLTAHLLRVVPNACILFGSYEV 355
>SPAC823.10c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 296
Score = 37.9 bits (84), Expect = 0.001
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +3
Query: 285 THTAVV-PLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCK 461
T TA+ P D++K R+Q++ YKN ++ K+ EG RG G+ + S+
Sbjct: 223 TATAITNPFDMLKTRVQLEPHIYKNFLHSAKLVYANEGFRGFLDGFFLRVLRKSISSTIT 282
Query: 462 FGFYE 476
+ YE
Sbjct: 283 WSVYE 287
>SPBC530.10c |anc1||adenine nucleotide carrier
Anc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 37.9 bits (84), Expect = 0.001
Identities = 27/103 (26%), Positives = 47/103 (45%), Gaps = 9/103 (8%)
Frame = +3
Query: 228 GSPKYFAXXXXXXXXXXXXTHTAVVPLDLVKCRLQVDAE--------KYKNVVNGFKVSV 383
G K+FA + V LD + RL DA+ ++ +V+ ++ +
Sbjct: 127 GYAKWFAGNLASGGAAGAASLLFVYSLDYARTRLANDAKSAKKGGERQFNGLVDVYRKTY 186
Query: 384 REEGVRGLAKGWAPTFIGYSMQGLCKFGFYEVFK-VAYAGMLD 509
R +G+RGL +G+ P+ +G + FG Y+ K V G L+
Sbjct: 187 RSDGLRGLYRGFGPSVVGIVVYRGLYFGMYDTLKPVVLVGPLE 229
Score = 31.1 bits (67), Expect = 0.15
Identities = 36/159 (22%), Positives = 60/159 (37%), Gaps = 11/159 (6%)
Frame = +3
Query: 177 TGGMAASAAVPTESCEFGSPKY--FAXXXXXXXXXXXXTHTAVVPLDLVKCRLQVDAE-- 344
T AA+A+ P + K F + TA P++ VK +Q E
Sbjct: 3 TSSAAAAASTPVNANTITETKNSTFFFDFMMGGVSAAVSKTAAAPIERVKLLIQNQDEMI 62
Query: 345 -------KYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGFYEVFKVAYAGM 503
+YK + FK + EEGV L +G + Y F F + FK + G
Sbjct: 63 RAGRLSHRYKGIGECFKRTAAEEGVISLWRGNTANVLRYFPTQALNFAFKDKFKKMF-GY 121
Query: 504 LDDETAYTYRTFVYLAASASAEFIADIALSPMEAAKVRI 620
+ Y LA+ +A + + + ++ A+ R+
Sbjct: 122 KKERDGYAKWFAGNLASGGAAGAASLLFVYSLDYARTRL 160
>SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 298
Score = 35.9 bits (79), Expect = 0.005
Identities = 31/117 (26%), Positives = 48/117 (41%), Gaps = 2/117 (1%)
Frame = +3
Query: 297 VVPLDLVKCRLQ--VDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGF 470
VVP +L+K RLQ +A KY V+ F V++E + L G+ T + + FG
Sbjct: 122 VVPFELMKIRLQDVKNASKYNGTVDCFTKIVKQERILALYNGFEATMWRHVVWNAGYFGV 181
Query: 471 YEVFKVAYAGMLDDETAYTYRTFVYLAASASAEFIADIALSPMEAAKVRIQTMPGFA 641
+ + L ++ L A +P + K RIQT+P A
Sbjct: 182 IQKIR----NSLTPASSRIGEIRNNLIAGTIGGIFGTFLSTPFDVIKSRIQTVPRIA 234
Score = 33.9 bits (74), Expect = 0.021
Identities = 25/109 (22%), Positives = 46/109 (42%), Gaps = 2/109 (1%)
Frame = +3
Query: 303 PLDLVKCRLQVDAEK--YKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGFYE 476
PLD+VK R+Q+ K Y + K V+ EG L +G P + + + KF +
Sbjct: 28 PLDVVKTRMQLSVGKSDYNGTFDCLKKIVKNEGPHRLYRGILPPILMEAPKRALKFASND 87
Query: 477 VFKVAYAGMLDDETAYTYRTFVYLAASASAEFIADIALSPMEAAKVRIQ 623
+ + + + + + + + A F + P E K+R+Q
Sbjct: 88 TYSKLWRKVFKRKDS---SPALSILTGSCAGFTETFVVVPFELMKIRLQ 133
Score = 25.0 bits (52), Expect = 9.8
Identities = 15/47 (31%), Positives = 19/47 (40%), Gaps = 6/47 (12%)
Frame = +3
Query: 303 PLDLVKCRLQV------DAEKYKNVVNGFKVSVREEGVRGLAKGWAP 425
P D++K R+Q KY REEG L KG+ P
Sbjct: 219 PFDVIKSRIQTVPRIAGQVPKYNWAYPALVTVAREEGFTALYKGFVP 265
>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 35.5 bits (78), Expect = 0.007
Identities = 26/94 (27%), Positives = 41/94 (43%)
Frame = +3
Query: 348 YKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGFYEVFKVAYAGMLDDETAYT 527
Y N + F+ + EG+ +G P+ G G+ +F YE FK LDD
Sbjct: 230 YNNTFDAFRKIYKYEGLAAFYRGLFPSLFGTLHVGI-QFPLYEYFK----SFLDDFFGKK 284
Query: 528 YRTFVYLAASASAEFIADIALSPMEAAKVRIQTM 629
+ LAA+ S + A P E + R+Q++
Sbjct: 285 SNFHIVLAATLS-KIAASTVTYPHEVLRTRLQSL 317
Score = 33.9 bits (74), Expect = 0.021
Identities = 28/77 (36%), Positives = 35/77 (45%), Gaps = 11/77 (14%)
Frame = +3
Query: 297 VVPLDLVKCRLQVDAEKY-----KN--VVNGFKVSVR----EEGVRGLAKGWAPTFIGYS 443
V PLD+VK R Q Y KN V+ G S+R EG+ GL +G P +GY
Sbjct: 23 VAPLDVVKTRKQAQKAFYSTGGGKNTMVLGGTLSSMRTIFHNEGIAGLYRGVGPMMLGYL 82
Query: 444 MQGLCKFGFYEVFKVAY 494
F YE KV +
Sbjct: 83 PSWSIYFVVYEKCKVLF 99
>SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 303
Score = 34.3 bits (75), Expect = 0.016
Identities = 31/116 (26%), Positives = 45/116 (38%), Gaps = 4/116 (3%)
Frame = +3
Query: 288 HTAVVPLDLVKCRLQ----VDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGL 455
H+ + P+D +K R+Q V N+VN EGV L +G + +G
Sbjct: 34 HSVMYPVDAIKTRMQMLNGVSRSVSGNIVNSVIKISSTEGVYSLWRGISSVIMGAGPSHA 93
Query: 456 CKFGFYEVFKVAYAGMLDDETAYTYRTFVYLAASASAEFIADIALSPMEAAKVRIQ 623
F E FK D R A A A I+D ++P + K R+Q
Sbjct: 94 IYFSVLEFFKSKINASPD-------RPLASALAGACAITISDAFMTPFDVIKQRMQ 142
Score = 29.5 bits (63), Expect = 0.46
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +3
Query: 297 VVPLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSM 446
+ P D++K R+Q+ + KYK+ ++ R EG+ + PT I S+
Sbjct: 131 MTPFDVIKQRMQLPSRKYKSALHCATTVFRNEGLGAFYISY-PTCIAMSI 179
>SPBC29A3.11c |||mitochondrial carboxylic acid
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 33.5 bits (73), Expect = 0.028
Identities = 18/65 (27%), Positives = 33/65 (50%)
Frame = +3
Query: 303 PLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGFYEVF 482
PLD +K R Q + + + F+ +V+ EG++GL +G I ++ F Y+
Sbjct: 37 PLDSIKVRQQT--YNFPTIRSCFQNAVKNEGLKGLYRGLTLPLISATLSRSVSFTVYDSL 94
Query: 483 KVAYA 497
K+ +A
Sbjct: 95 KLTFA 99
>SPAC4G9.20c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 31.5 bits (68), Expect = 0.11
Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 4/65 (6%)
Frame = +3
Query: 294 AVVPLDLVKCRLQVDA----EKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCK 461
A P D+VK ++Q D YKN K + G+RG +G+ P + +
Sbjct: 229 AAYPFDIVKSKIQTDGFLSKATYKNSWQCAKGIYTKAGLRGFYRGFVPVLVRAAPANAVT 288
Query: 462 FGFYE 476
F YE
Sbjct: 289 FYVYE 293
>SPBC1271.11 |||tricarboxylate transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 258
Score = 30.7 bits (66), Expect = 0.20
Identities = 19/67 (28%), Positives = 29/67 (43%)
Frame = +3
Query: 285 THTAVVPLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKF 464
T + PLD++K ++ + E Y+ VV +E G+ G KG S+
Sbjct: 181 TAAVLTPLDVIKTQINLRPESYRKVVRRI---YKENGIFGFEKGLGLRVFASSLGLSIYL 237
Query: 465 GFYEVFK 485
G YE K
Sbjct: 238 GTYEHVK 244
>SPBP23A10.06 |||manganese ion transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 335
Score = 29.1 bits (62), Expect = 0.60
Identities = 26/92 (28%), Positives = 37/92 (40%)
Frame = +3
Query: 360 VNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGFYEVFKVAYAGMLDDETAYTYRTF 539
V+G R EGVR L +G P+ +F YE Y+ A
Sbjct: 86 VSGLYQIARHEGVRSLWRGLVPSLTMLLPANTVQFLGYEQLLPLYSDWGFPAAA------ 139
Query: 540 VYLAASASAEFIADIALSPMEAAKVRIQTMPG 635
A ASA I+ +SP+E + R+Q + G
Sbjct: 140 --AIAGASARTISATIVSPIELFRTRVQAVGG 169
>SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 271
Score = 29.1 bits (62), Expect = 0.60
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +3
Query: 303 PLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGW 419
PL+++K R Q+ + +V+N R EG++G +G+
Sbjct: 103 PLEVIKARTQISQKG--SVINTISTLARSEGLKGFYRGY 139
Score = 25.4 bits (53), Expect = 7.4
Identities = 21/78 (26%), Positives = 30/78 (38%), Gaps = 13/78 (16%)
Frame = +3
Query: 291 TAVVPLDLVKCRLQV-------------DAEKYKNVVNGFKVSVREEGVRGLAKGWAPTF 431
T PLD+VK R QV AEK ++ K+ + GV+G +G
Sbjct: 189 TISTPLDIVKTRYQVATSSAMRKAEYGLQAEKELGILEIAKLLFSKHGVKGFTRGLFTRM 248
Query: 432 IGYSMQGLCKFGFYEVFK 485
G+ +E FK
Sbjct: 249 CYIMPSGMISMSVFESFK 266
>SPAC2F7.08c |snf5||chromatin remodeling complex subunit Snf5
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 632
Score = 28.7 bits (61), Expect = 0.80
Identities = 10/18 (55%), Positives = 16/18 (88%)
Frame = +3
Query: 300 VPLDLVKCRLQVDAEKYK 353
+P+DLV RL++DA++YK
Sbjct: 137 LPVDLVPIRLEIDADRYK 154
>SPCC645.06c |rgf3|lad1|RhoGEF Rgf3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1275
Score = 28.3 bits (60), Expect = 1.1
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
Frame = -2
Query: 454 RPCIEYPMKVGA---HPLARPRTPSSRTDTLKPFTT 356
RP E P+ G HPL RP PSS + P++T
Sbjct: 154 RPLPETPVSPGGSLVHPLPRPPLPSSVSSHSSPYST 189
>SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 338
Score = 26.6 bits (56), Expect = 3.2
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 384 REEGVRGLAKGWAPTFIGYSMQGLCKFGFYE 476
+ EG+ GL +G+ P S Q F FYE
Sbjct: 293 KSEGLLGLFRGFGPRIFWTSSQSSLMFVFYE 323
>SPAC3G6.01 |hrp3||ATP-dependent DNA helicase Hrp3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1388
Score = 26.6 bits (56), Expect = 3.2
Identities = 10/36 (27%), Positives = 17/36 (47%)
Frame = +3
Query: 363 NGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGF 470
+ F++ + V G + W P + G+CK GF
Sbjct: 1105 SNFQIPMHVRSVHGWSCQWGPREDSMLLSGICKHGF 1140
>SPCC16C4.14c |sfc4||transcription factor TFIIIC complex subunit
Sfc4|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1006
Score = 26.6 bits (56), Expect = 3.2
Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
Frame = +1
Query: 181 VAWRRLLRYPRSPVN---LDRLNISLFAELVVFCH 276
+AW+ +YP P+ D ++L+AEL++ H
Sbjct: 302 IAWKYFYQYPAPPIGNDIFDLPTLNLYAELLLLDH 336
>SPBC428.08c |clr4||histone H3 methyltransferase
Clr4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 490
Score = 26.2 bits (55), Expect = 4.2
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = -2
Query: 391 SSRTDTLKPFTTFLYFSA--STWRRHFTRSRGTTAVWVRPHDRTPPTP 254
SSR+DT +P SA + W+R R +G+ + PH + P P
Sbjct: 35 SSRSDTWEPPENLSGCSAVLAEWKRRKRRLKGSNSDSDSPHHASNPHP 82
>SPAC12B10.09 |||S-adenosylmethionine transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 345
Score = 26.2 bits (55), Expect = 4.2
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +3
Query: 537 FVYLAASASAEFIADIALSPMEAAKVRIQTMPGF 638
F L A A D++L P++ K R+Q GF
Sbjct: 83 FEALGAGICAGLAVDLSLFPIDTLKTRLQAKGGF 116
>SPBC1604.04 |||thiamine pyrophosphate
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 314
Score = 26.2 bits (55), Expect = 4.2
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +3
Query: 303 PLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKG 416
P+D V LQ YK+ + F R G++GL +G
Sbjct: 212 PVDTVVKTLQTFPSNYKSFKDCFLSIYRNSGIKGLYRG 249
>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 25.8 bits (54), Expect = 5.6
Identities = 13/53 (24%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
Frame = +3
Query: 291 TAVVPLDLVKCRLQVD-----AEKYKNVVNGFKVSVREEGVRGLAKGWAPTFI 434
T P D+++ R QV+ YKN+ + + EG+ G +G++ +
Sbjct: 242 TLTFPADVLRRRFQVNRIPGIGHNYKNIKSAIFHIYKTEGINGFFRGYSSNML 294
>SPCC31H12.07 |sec231|sec23a, SPCC5E4.01|GTPase activating protein
Sec23a|Schizosaccharomyces pombe|chr 3|||Manual
Length = 759
Score = 25.0 bits (52), Expect = 9.8
Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 5/32 (15%)
Frame = +3
Query: 147 STVAPVAIEQTGGMAASAA-----VPTESCEF 227
S V+PVA++Q SAA +P + CEF
Sbjct: 203 SNVSPVALQQARSFQGSAAPSRFLLPIQQCEF 234
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 25.0 bits (52), Expect = 9.8
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = -2
Query: 316 TRSRGTTAVWVRPHDRTPPTPQRAKYLGDPN 224
TRS GT++ +D P + GDPN
Sbjct: 291 TRSTGTSSSMAHSYDSPPSPSSPSDAYGDPN 321
>SPAC1002.05c |jmj2||histone demethylase Jmj2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 715
Score = 25.0 bits (52), Expect = 9.8
Identities = 16/53 (30%), Positives = 20/53 (37%)
Frame = +2
Query: 62 LKHNNVLFVARCGAELSVPWPTIARPVPVDGRARGYRADRWHGGVCCGTHGVL 220
+K NN GA+LS A P Y D W+ V T+G L
Sbjct: 388 VKDNNTSLEVEYGADLSTLDQGSAFPSLAKNPVNPYSKDTWNLNVIASTNGSL 440
>SPAC2F7.03c |pom1||DYRK family protein kinase
Pom1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1087
Score = 25.0 bits (52), Expect = 9.8
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = -2
Query: 460 LQRPCIEYPMKVGAHPLARPRTPSSRTDTL 371
+ RP PM+ H L P+ PS++ L
Sbjct: 1024 IPRPLPNLPMEYNDHTLPSPKEPSNQASNL 1053
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,619,872
Number of Sequences: 5004
Number of extensions: 49564
Number of successful extensions: 183
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 161
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 182
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 303841898
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -