Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10a11
         (686 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    25   0.77 
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    25   0.77 
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   7.2  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   7.2  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 24.6 bits (51), Expect = 0.77
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = -2

Query: 292 VIFKFNKTISILDKYVSDSSKTFEELFQVSL 200
           V   F+K I  L +++S S K F E+F VSL
Sbjct: 219 VFISFSK-ICYLHQHLSKSVKLFNEVFGVSL 248


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 24.6 bits (51), Expect = 0.77
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = -2

Query: 292 VIFKFNKTISILDKYVSDSSKTFEELFQVSL 200
           V   F+K I  L +++S S K F E+F VSL
Sbjct: 237 VFISFSK-ICYLHQHLSKSVKLFNEVFGVSL 266


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 6/27 (22%), Positives = 13/27 (48%)
 Frame = +1

Query: 187 LWSKRERLGKVLQRFWKNQRHTYQEWI 267
           LW+       V++++    R+  Q W+
Sbjct: 436 LWTSHLTQADVIEKYLSKARYVIQTWV 462


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -1

Query: 614 ASQILPHLHSCVVYGRQRKSLRQLDA 537
           A  ++P   SC ++ R  K ++QL+A
Sbjct: 206 AELVMPLCKSCDLHHRLSKLIKQLNA 231


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,940
Number of Sequences: 336
Number of extensions: 2814
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)