Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc10a11
(686 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 175 2e-44
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 163 8e-41
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 126 1e-29
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 126 1e-29
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 107 6e-24
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 107 6e-24
U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein (sp... 91 7e-19
U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein (sp... 91 7e-19
U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein (spl... 91 7e-19
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 68 7e-12
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 68 7e-12
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 68 7e-12
AC024793-5|AAF60689.1| 79|Caenorhabditis elegans Hypothetical ... 51 7e-07
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 49 3e-06
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 49 3e-06
U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene... 47 1e-05
U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprote... 47 1e-05
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 46 3e-05
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 46 3e-05
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 44 8e-05
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 44 8e-05
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 44 8e-05
U97193-2|AAB52444.1| 137|Caenorhabditis elegans Hypothetical pr... 42 4e-04
AF106588-2|AAC78488.1| 137|Caenorhabditis elegans Hypothetical ... 42 4e-04
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 42 5e-04
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 42 5e-04
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 42 5e-04
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 41 7e-04
AF098993-1|AAC67471.2| 367|Caenorhabditis elegans Zinc finger t... 41 0.001
U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle orienta... 40 0.001
AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein. 40 0.001
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 40 0.002
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 40 0.002
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 39 0.004
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 39 0.004
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 39 0.004
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 38 0.005
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 38 0.007
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 38 0.007
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 38 0.007
AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical ... 38 0.007
Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 37 0.012
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 37 0.012
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 37 0.012
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 37 0.012
U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna b... 37 0.012
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 37 0.012
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 37 0.012
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 37 0.012
Z81038-2|CAB02757.1| 454|Caenorhabditis elegans Hypothetical pr... 37 0.016
Z78019-5|CAB01455.1| 305|Caenorhabditis elegans Hypothetical pr... 37 0.016
U21302-2|AAA92287.1| 305|Caenorhabditis elegans RNP-1 protein. 37 0.016
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 36 0.021
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 36 0.021
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 36 0.021
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 36 0.021
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 36 0.021
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 36 0.021
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 36 0.021
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 36 0.021
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 36 0.021
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 36 0.021
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 36 0.027
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 36 0.027
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 36 0.027
Z99279-4|CAB16494.1| 121|Caenorhabditis elegans Hypothetical pr... 36 0.036
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 36 0.036
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 35 0.047
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 35 0.063
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 34 0.083
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 34 0.083
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 34 0.083
Z77669-6|CAB01243.2| 371|Caenorhabditis elegans Hypothetical pr... 33 0.14
U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya bind... 33 0.14
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 33 0.19
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 33 0.19
AC084197-23|AAM44389.1| 610|Caenorhabditis elegans Hypothetical... 33 0.19
Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical pr... 33 0.25
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 32 0.33
AL032626-17|CAA21536.1| 282|Caenorhabditis elegans Hypothetical... 32 0.33
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 32 0.44
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 32 0.44
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 31 0.58
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 31 0.58
Z81084-7|CAB03111.1| 312|Caenorhabditis elegans Hypothetical pr... 31 0.77
Z81037-10|CAB02754.1| 312|Caenorhabditis elegans Hypothetical p... 31 0.77
Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical pr... 31 0.77
X95609-1|CAA64867.1| 312|Caenorhabditis elegans mec-8 protein. 31 0.77
X95608-1|CAA64866.1| 312|Caenorhabditis elegans mec-8 protein. 31 0.77
AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical ... 31 0.77
AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical ... 31 0.77
AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical ... 31 0.77
Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical pr... 31 1.0
U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical p... 31 1.0
AL033514-34|CAA22113.1| 463|Caenorhabditis elegans Hypothetical... 30 1.3
AL033514-33|CAB54500.1| 480|Caenorhabditis elegans Hypothetical... 30 1.3
AF160493-1|AAD43348.1| 465|Caenorhabditis elegans DNA-binding p... 30 1.3
AF160492-1|AAD43347.1| 463|Caenorhabditis elegans DNA-binding p... 30 1.3
AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily a... 30 1.3
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 30 1.8
U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical p... 30 1.8
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 30 1.8
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical pr... 29 2.4
U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna b... 29 2.4
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 29 2.4
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 29 2.4
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 29 2.4
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 29 2.4
AF099918-1|AAK29840.2| 820|Caenorhabditis elegans Hypothetical ... 29 2.4
Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z50176-3|CAA90540.1| 196|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 28 5.4
AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein... 28 7.2
AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein... 28 7.2
AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization... 28 7.2
Z66512-2|CAA91323.1| 387|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical pr... 27 9.5
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 27 9.5
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 27 9.5
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 175 bits (426), Expect = 2e-44
Identities = 81/178 (45%), Positives = 124/178 (69%), Gaps = 6/178 (3%)
Frame = +2
Query: 164 RVYVGGLPFGVRERDLEKFFKGFGRIRDILIKNGYGFVEFEDYRDADDAVYELNGKELLG 343
RVY+G LP +RD+E FF+G+G++ D+++KNG+GFV+F+D RDADDAV++LNGKEL G
Sbjct: 3 RVYIGRLPNRASDRDVEHFFRGYGKLSDVIMKNGFGFVDFQDQRDADDAVHDLNGKELCG 62
Query: 344 ERVVVE-PARGI----DRSADRYRRGDRHXXXXXXXXXXXXXXPPTRTEYRLIVENLSSR 508
ERV++E P R + +RS +R + P T +RL+++NLS+R
Sbjct: 63 ERVILEFPRRKVGYNEERSGSGFRGREPTFRKGGERQFSNRYSRPCSTRFRLVIDNLSTR 122
Query: 509 ISWQDLKDYMRQAG-EVTYADAHKQHRNEGVVEFATHSDMRAAIEKLDGTELNGRRVR 679
SWQD+KD++R+ G E TY++AHK++ N+ +V F +H D+R A+ KL G +LNGR+++
Sbjct: 123 YSWQDIKDHIRKLGIEPTYSEAHKRNVNQAIVCFTSHDDLRDAMNKLQGEDLNGRKLK 180
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 163 bits (397), Expect = 8e-41
Identities = 90/199 (45%), Positives = 129/199 (64%), Gaps = 22/199 (11%)
Frame = +2
Query: 155 VGSRVYVGGLPFGVRERDLEKFFKGFGRIRDILIKNGYGFVEFEDYRDADDAVYELNGKE 334
+ +R+Y+G L V E+D+E FF+G+G+IRD+L+KNG+GFVEF+D RDA+DAV++LNGKE
Sbjct: 1 MAARIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDAEDAVHDLNGKE 60
Query: 335 LLGERVVVEPARGIDRSADR--YRRGDR----------HXXXXXXXXXXXXXXPPTR--- 469
L GERV+++ ++ DR + G R PP R
Sbjct: 61 LGGERVILDYSKPRGGGGDRGGFGGGGRGGARVSSYSGGGGGGRDRFDRYDRGPPRRESR 120
Query: 470 ------TEYRLIVENLSSRISWQDLKDYMRQAG-EVTYADAHKQHRNEGVVEFATHSDMR 628
T +R++VENLSSRISWQDLKD +R+ G E TYA+AHK+ NE ++ FAT SD++
Sbjct: 121 YGRPYSTRHRVVVENLSSRISWQDLKDQVRRQGVEPTYAEAHKR-PNEALLCFATPSDLK 179
Query: 629 AAIEKLDGTELNGRRVRLV 685
IEK DG +LNGR+++++
Sbjct: 180 RCIEKCDGMDLNGRKIKMI 198
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 126 bits (305), Expect = 1e-29
Identities = 77/174 (44%), Positives = 99/174 (56%), Gaps = 9/174 (5%)
Frame = +2
Query: 164 RVYVGGLPFGVRERDLEKFFKGFGRIRDILIKNGYG----FVEFEDYRDADDAVYELNGK 331
+VYVG LP VRE+++E F +GRI+ + IK+G G FVEFED+RDA+DAV +G
Sbjct: 10 KVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAEDAVRARDGY 69
Query: 332 ELLGERVVVEPARGIDRSADRYRR----GD-RHXXXXXXXXXXXXXXPPTRTEYRLIVEN 496
E G R+ VE RG+ R GD R P RT YR+IVE
Sbjct: 70 EFDGRRIRVEFTRGVGPRGPSGRPLQDGGDHRGGDFRGGRGGGRGGGPQRRTGYRVIVEG 129
Query: 497 LSSRISWQDLKDYMRQAGEVTYADAHKQHRNEGVVEFATHSDMRAAIEKLDGTE 658
L SWQDLKD+MR AG+V YAD + GVVEF + D++ A+ KLD T+
Sbjct: 130 LPPTGSWQDLKDHMRDAGDVCYADVARD--GTGVVEFTRYEDVKYAVRKLDDTK 181
Score = 40.3 bits (90), Expect = 0.001
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Frame = +2
Query: 473 EYRLIVENLSSRISWQDLKDYMRQAGEVTYADAHKQHRNEGV--VEFATHSDMRAAIEKL 646
+ ++ V NL + ++++D + G + Y D K R VEF H D A+
Sbjct: 8 DQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDI-KSGRGPAFAFVEFEDHRDAEDAVRAR 66
Query: 647 DGTELNGRRVRL 682
DG E +GRR+R+
Sbjct: 67 DGYEFDGRRIRV 78
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 126 bits (304), Expect = 1e-29
Identities = 77/174 (44%), Positives = 99/174 (56%), Gaps = 9/174 (5%)
Frame = +2
Query: 164 RVYVGGLPFGVRERDLEKFFKGFGRIRDILIKNGYG----FVEFEDYRDADDAVYELNGK 331
+VYVG LP VRE+++E F +GRI+ + IK+G G FVEFED+RDA+DAV +G
Sbjct: 10 KVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAEDAVRARDGY 69
Query: 332 ELLGERVVVEPARGIDRSADRYRR----GD-RHXXXXXXXXXXXXXXPPTRTEYRLIVEN 496
E G R+ VE RG+ R GD R P RT YR+IVE
Sbjct: 70 EFDGRRIRVEFTRGVGPRGPGGRPLQDGGDHRGGDFRGGRGGGRGGGPQRRTGYRVIVEG 129
Query: 497 LSSRISWQDLKDYMRQAGEVTYADAHKQHRNEGVVEFATHSDMRAAIEKLDGTE 658
L SWQDLKD+MR AG+V YAD + GVVEF + D++ A+ KLD T+
Sbjct: 130 LPPTGSWQDLKDHMRDAGDVCYADVARD--GTGVVEFTRYEDVKYAVRKLDDTK 181
Score = 40.3 bits (90), Expect = 0.001
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Frame = +2
Query: 473 EYRLIVENLSSRISWQDLKDYMRQAGEVTYADAHKQHRNEGV--VEFATHSDMRAAIEKL 646
+ ++ V NL + ++++D + G + Y D K R VEF H D A+
Sbjct: 8 DQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDI-KSGRGPAFAFVEFEDHRDAEDAVRAR 66
Query: 647 DGTELNGRRVRL 682
DG E +GRR+R+
Sbjct: 67 DGYEFDGRRIRV 78
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 107 bits (258), Expect = 6e-24
Identities = 63/150 (42%), Positives = 88/150 (58%), Gaps = 21/150 (14%)
Frame = +2
Query: 155 VGSRVYVGGLPFGVRERDLEKFFKGFGRIRDILIKNGYGFVEFEDYRDADDAVYELNGKE 334
+ +R+Y+G L V E+D+E FF+G+G+IRD+L+KNG+GFVEF+D RDA+DAV++LNGKE
Sbjct: 1 MAARIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDAEDAVHDLNGKE 60
Query: 335 LLGERVVVEPARGIDRSADR--YRRGDR----------HXXXXXXXXXXXXXXPPTR--- 469
L GERV+++ ++ DR + G R PP R
Sbjct: 61 LGGERVILDYSKPRGGGGDRGGFGGGGRGGARVSSYSGGGGGGRDRFDRYDRGPPRRESR 120
Query: 470 ------TEYRLIVENLSSRISWQDLKDYMR 541
T +R++VENLSSRISWQ K R
Sbjct: 121 YGRPYSTRHRVVVENLSSRISWQVCKTKRR 150
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 107 bits (258), Expect = 6e-24
Identities = 62/146 (42%), Positives = 87/146 (59%), Gaps = 21/146 (14%)
Frame = +2
Query: 155 VGSRVYVGGLPFGVRERDLEKFFKGFGRIRDILIKNGYGFVEFEDYRDADDAVYELNGKE 334
+ +R+Y+G L V E+D+E FF+G+G+IRD+L+KNG+GFVEF+D RDA+DAV++LNGKE
Sbjct: 1 MAARIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDAEDAVHDLNGKE 60
Query: 335 LLGERVVVEPARGIDRSADR--YRRGDR----------HXXXXXXXXXXXXXXPPTR--- 469
L GERV+++ ++ DR + G R PP R
Sbjct: 61 LGGERVILDYSKPRGGGGDRGGFGGGGRGGARVSSYSGGGGGGRDRFDRYDRGPPRRESR 120
Query: 470 ------TEYRLIVENLSSRISWQDLK 529
T +R++VENLSSRISWQ K
Sbjct: 121 YGRPYSTRHRVVVENLSSRISWQQEK 146
>U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform b protein.
Length = 166
Score = 91.1 bits (216), Expect = 7e-19
Identities = 46/104 (44%), Positives = 65/104 (62%), Gaps = 2/104 (1%)
Frame = +2
Query: 164 RVYVGGLPFGVRERDLEKFFKGFGRIRDILIKNGYGFVEFEDYRDADDAVYELNGKELLG 343
R+Y+G +P+ RERD+E+F KG+G+I +I +K G+ FV+FED RDA+DA ++L+GK + G
Sbjct: 3 RLYLGKIPYNARERDVERFLKGYGKINNISMKYGFAFVDFEDSRDAEDACHDLDGKTMEG 62
Query: 344 E--RVVVEPARGIDRSADRYRRGDRHXXXXXXXXXXXXXXPPTR 469
R+VVE ARG R DR+ G R PP R
Sbjct: 63 SSMRLVVEMARGKPRGNDRH--GSRSPRRRSRSPRRRSRTPPRR 104
>U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform d protein.
Length = 208
Score = 91.1 bits (216), Expect = 7e-19
Identities = 46/104 (44%), Positives = 65/104 (62%), Gaps = 2/104 (1%)
Frame = +2
Query: 164 RVYVGGLPFGVRERDLEKFFKGFGRIRDILIKNGYGFVEFEDYRDADDAVYELNGKELLG 343
R+Y+G +P+ RERD+E+F KG+G+I +I +K G+ FV+FED RDA+DA ++L+GK + G
Sbjct: 3 RLYLGKIPYNARERDVERFLKGYGKINNISMKYGFAFVDFEDSRDAEDACHDLDGKTMEG 62
Query: 344 E--RVVVEPARGIDRSADRYRRGDRHXXXXXXXXXXXXXXPPTR 469
R+VVE ARG R DR+ G R PP R
Sbjct: 63 SSMRLVVEMARGKPRGNDRH--GSRSPRRRSRSPRRRSRTPPRR 104
>U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform a protein.
Length = 208
Score = 91.1 bits (216), Expect = 7e-19
Identities = 46/104 (44%), Positives = 65/104 (62%), Gaps = 2/104 (1%)
Frame = +2
Query: 164 RVYVGGLPFGVRERDLEKFFKGFGRIRDILIKNGYGFVEFEDYRDADDAVYELNGKELLG 343
R+Y+G +P+ RERD+E+F KG+G+I +I +K G+ FV+FED RDA+DA ++L+GK + G
Sbjct: 3 RLYLGKIPYNARERDVERFLKGYGKINNISMKYGFAFVDFEDSRDAEDACHDLDGKTMEG 62
Query: 344 E--RVVVEPARGIDRSADRYRRGDRHXXXXXXXXXXXXXXPPTR 469
R+VVE ARG R DR+ G R PP R
Sbjct: 63 SSMRLVVEMARGKPRGNDRH--GSRSPRRRSRSPRRRSRTPPRR 104
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 67.7 bits (158), Expect = 7e-12
Identities = 33/74 (44%), Positives = 47/74 (63%), Gaps = 3/74 (4%)
Frame = +2
Query: 161 SRVYVGGLPFGVRERDLEKFFKGFGRIRDILIKN---GYGFVEFEDYRDADDAVYELNGK 331
++VYVGGLP ++LE+ F FGRIR + + G+ FVE++D RDA+DAV L+G
Sbjct: 3 AKVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDGS 62
Query: 332 ELLGERVVVEPARG 373
+ G R VE + G
Sbjct: 63 RICGVRARVELSTG 76
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 67.7 bits (158), Expect = 7e-12
Identities = 33/74 (44%), Positives = 47/74 (63%), Gaps = 3/74 (4%)
Frame = +2
Query: 161 SRVYVGGLPFGVRERDLEKFFKGFGRIRDILIKN---GYGFVEFEDYRDADDAVYELNGK 331
++VYVGGLP ++LE+ F FGRIR + + G+ FVE++D RDA+DAV L+G
Sbjct: 3 AKVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDGS 62
Query: 332 ELLGERVVVEPARG 373
+ G R VE + G
Sbjct: 63 RICGVRARVELSTG 76
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 67.7 bits (158), Expect = 7e-12
Identities = 33/74 (44%), Positives = 47/74 (63%), Gaps = 3/74 (4%)
Frame = +2
Query: 161 SRVYVGGLPFGVRERDLEKFFKGFGRIRDILIKN---GYGFVEFEDYRDADDAVYELNGK 331
++VYVGGLP ++LE+ F FGRIR + + G+ FVE++D RDA+DAV L+G
Sbjct: 3 AKVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDGS 62
Query: 332 ELLGERVVVEPARG 373
+ G R VE + G
Sbjct: 63 RICGVRARVELSTG 76
>AC024793-5|AAF60689.1| 79|Caenorhabditis elegans Hypothetical
protein Y48G1BL.4 protein.
Length = 79
Score = 51.2 bits (117), Expect = 7e-07
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Frame = +2
Query: 164 RVYVGGLPFGVRERDLEKFFKGFGRIRDILIKN--GYGFVEFEDYRDADDAVYELNGKEL 337
RVY+G P +RD E FF +G++ D ++KN G G +F+D DADD + + + L
Sbjct: 3 RVYIGRFPNRASDRDAEHFFCDYGKLPDAIMKNVFGVGCKDFQDQSDADDIICDEQTRIL 62
Query: 338 LGERV 352
L E++
Sbjct: 63 LVEKL 67
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 49.2 bits (112), Expect = 3e-06
Identities = 44/174 (25%), Positives = 76/174 (43%), Gaps = 12/174 (6%)
Frame = +2
Query: 197 RERDLEKFFKGFGRIRDILI--------KNGYGFVEFEDYRDADDAVYELNGKELLGERV 352
R RDLE+FF G +RD+ I G +VEF D ++ LNG+ L+G +
Sbjct: 37 RPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWD-EESVPLGLALNGQRLMGAPL 95
Query: 353 VVEPARGIDRSADRYRRGDRHXXXXXXXXXXXXXXPPTRTEYRLIVENLSSRISWQDLKD 532
++ A+R R + P + ++VENL +I + ++D
Sbjct: 96 QIQRT-----CAERNRAAN-----SSVASTLGFVAPGNKGPTHVLVENLHPKIDEKMIRD 145
Query: 533 YMRQAGEV----TYADAHKQHRNEGVVEFATHSDMRAAIEKLDGTELNGRRVRL 682
G + D+++++R + F D + + E+L+ EL GR +RL
Sbjct: 146 IFESFGRIEKIDLEVDSNRENRGFATITFRNADDAQKSCEQLNNFELAGRCIRL 199
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 49.2 bits (112), Expect = 3e-06
Identities = 44/174 (25%), Positives = 76/174 (43%), Gaps = 12/174 (6%)
Frame = +2
Query: 197 RERDLEKFFKGFGRIRDILI--------KNGYGFVEFEDYRDADDAVYELNGKELLGERV 352
R RDLE+FF G +RD+ I G +VEF D ++ LNG+ L+G +
Sbjct: 182 RPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWD-EESVPLGLALNGQRLMGAPL 240
Query: 353 VVEPARGIDRSADRYRRGDRHXXXXXXXXXXXXXXPPTRTEYRLIVENLSSRISWQDLKD 532
++ A+R R + P + ++VENL +I + ++D
Sbjct: 241 QIQRT-----CAERNRAAN-----SSVASTLGFVAPGNKGPTHVLVENLHPKIDEKMIRD 290
Query: 533 YMRQAGEV----TYADAHKQHRNEGVVEFATHSDMRAAIEKLDGTELNGRRVRL 682
G + D+++++R + F D + + E+L+ EL GR +RL
Sbjct: 291 IFESFGRIEKIDLEVDSNRENRGFATITFRNADDAQKSCEQLNNFELAGRCIRL 344
>U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene on
x protein 1 protein.
Length = 415
Score = 46.8 bits (106), Expect = 1e-05
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 6/74 (8%)
Frame = +2
Query: 164 RVYVGGLPFGVRERDLEKFFKGFGRIRDILI------KNGYGFVEFEDYRDADDAVYELN 325
R++V +PF R+ DL+ F+ FG + D+ I G+GFV E +DA+ A EL+
Sbjct: 154 RLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERGSKGFGFVTMERPQDAERARQELH 213
Query: 326 GKELLGERVVVEPA 367
G + G ++ V A
Sbjct: 214 GSMIEGRKIEVNCA 227
>U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprotein
protein.
Length = 415
Score = 46.8 bits (106), Expect = 1e-05
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 6/74 (8%)
Frame = +2
Query: 164 RVYVGGLPFGVRERDLEKFFKGFGRIRDILI------KNGYGFVEFEDYRDADDAVYELN 325
R++V +PF R+ DL+ F+ FG + D+ I G+GFV E +DA+ A EL+
Sbjct: 154 RLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERGSKGFGFVTMERPQDAERARQELH 213
Query: 326 GKELLGERVVVEPA 367
G + G ++ V A
Sbjct: 214 GSMIEGRKIEVNCA 227
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 46.0 bits (104), Expect = 3e-05
Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Frame = +2
Query: 164 RVYVGGLPFGVRERDLEKFFKGFGRIRDILI------KNGYGFVEFEDYRDADDAVYELN 325
R++V +PF RE DL F+ G + D+ I G+GFV ++ DAD A E N
Sbjct: 101 RLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERGSKGFGFVTMQNPDDADRARAEFN 160
Query: 326 GKELLGERVVVEPA 367
G + G RV V A
Sbjct: 161 GTTIEGRRVEVNLA 174
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 46.0 bits (104), Expect = 3e-05
Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Frame = +2
Query: 164 RVYVGGLPFGVRERDLEKFFKGFGRIRDILI------KNGYGFVEFEDYRDADDAVYELN 325
R++V +PF RE DL F+ G + D+ I G+GFV ++ DAD A E N
Sbjct: 101 RLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERGSKGFGFVTMQNPDDADRARAEFN 160
Query: 326 GKELLGERVVVEPA 367
G + G RV V A
Sbjct: 161 GTTIEGRRVEVNLA 174
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 44.4 bits (100), Expect = 8e-05
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 8/77 (10%)
Frame = +2
Query: 167 VYVGGLPFGVRERDLEKFFKGFGRIRDILIKN--------GYGFVEFEDYRDADDAVYEL 322
V+VG + + V E + F G + I + + GYGF+EF D + A+ A+ L
Sbjct: 20 VFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQTAEVAIRNL 79
Query: 323 NGKELLGERVVVEPARG 373
NG EL G + V+ A G
Sbjct: 80 NGYELSGRILRVDSAAG 96
Score = 30.7 bits (66), Expect = 1.0
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Frame = +2
Query: 467 RTEYRLIVENLSSRISWQDLKDYMRQAGEV-TYADAHKQHRNE----GVVEFATHSDMRA 631
R++ + V N+S +S ++ +AG V + H + + G +EF
Sbjct: 15 RSQRSVFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQTAEV 74
Query: 632 AIEKLDGTELNGRRVRL 682
AI L+G EL+GR +R+
Sbjct: 75 AIRNLNGYELSGRILRV 91
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 44.4 bits (100), Expect = 8e-05
Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 8/75 (10%)
Frame = +2
Query: 167 VYVGGLPFGVRERDLEKFFKGFGRIRDILI--------KNGYGFVEFEDYRDADDAVYEL 322
VYVG PF E +L FF G+I ++ I G+ F+EF + A AV ++
Sbjct: 7 VYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAVEQM 66
Query: 323 NGKELLGERVVVEPA 367
NG E G + V A
Sbjct: 67 NGAEFNGRPLRVNLA 81
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +2
Query: 584 RNEGVVEFATHSDMRAAIEKLDGTELNGRRVRL 682
R +EFA + A+E+++G E NGR +R+
Sbjct: 46 RGFAFIEFAEEGSAQRAVEQMNGAEFNGRPLRV 78
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 44.4 bits (100), Expect = 8e-05
Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = +2
Query: 149 KMVGSRVYVGGLPFGVRERDLEKFFKGFGRIRDILI--KNGYGFVEFEDYRDADDAVYEL 322
K + VYVG + + DL F +G I ++ I Y FV +E A A+ E+
Sbjct: 233 KADNTSVYVGNISQQTTDADLRDLFSTYGDIAEVRIFKTQRYAFVRYEKKECATKAIMEM 292
Query: 323 NGKELLGERV 352
NGKE+ G +V
Sbjct: 293 NGKEMAGNQV 302
Score = 41.9 bits (94), Expect = 4e-04
Identities = 46/179 (25%), Positives = 74/179 (41%), Gaps = 8/179 (4%)
Frame = +2
Query: 167 VYVGGLPFGVRERDLEKFFKGFGR------IRDILIKN--GYGFVEFEDYRDADDAVYEL 322
V+VG L V L+ F FG IRD+ + GYGFV F + ++A++A+ +
Sbjct: 137 VFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAENAIAGM 196
Query: 323 NGKELLGERVVVEPARGIDRSADRYRRGDRHXXXXXXXXXXXXXXPPTRTEYRLIVENLS 502
NGK +G+R V R+ R+ T + V N+S
Sbjct: 197 NGK-WIGKRAV--------RTNWAARKNSEENRDKLTFEQVFNSTKADNTS--VYVGNIS 245
Query: 503 SRISWQDLKDYMRQAGEVTYADAHKQHRNEGVVEFATHSDMRAAIEKLDGTELNGRRVR 679
+ + DL+D G++ K R V + AI +++G E+ G +VR
Sbjct: 246 QQTTDADLRDLFSTYGDIAEVRIFKTQR-YAFVRYEKKECATKAIMEMNGKEMAGNQVR 303
>U97193-2|AAB52444.1| 137|Caenorhabditis elegans Hypothetical
protein C06A5.5 protein.
Length = 137
Score = 41.9 bits (94), Expect = 4e-04
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +2
Query: 164 RVYVGGLPFGVRERDLEKFFKGFGRIRDILIKNGYGFVEFEDYR-DADDAVYELNGKELL 340
RVY+G P + D E FF G+ ++ D ++KN +G YR DADD +++ + LL
Sbjct: 3 RVYIGRFPNRASDHDAEHFFCGYEKLPDAIMKNIFGV----GYRSDADDIIFDEQRRILL 58
Query: 341 GER 349
E+
Sbjct: 59 VEK 61
>AF106588-2|AAC78488.1| 137|Caenorhabditis elegans Hypothetical
protein Y76G2A.1 protein.
Length = 137
Score = 41.9 bits (94), Expect = 4e-04
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +2
Query: 164 RVYVGGLPFGVRERDLEKFFKGFGRIRDILIKNGYGFVEFEDYR-DADDAVYELNGKELL 340
RVY+G P + D E FF G+ ++ D ++KN +G YR DADD +++ + LL
Sbjct: 3 RVYIGRFPNRASDHDAEHFFCGYEKLPDAIMKNIFGV----GYRSDADDIIFDEQRRILL 58
Query: 341 GER 349
E+
Sbjct: 59 VEK 61
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 41.5 bits (93), Expect = 5e-04
Identities = 27/81 (33%), Positives = 37/81 (45%), Gaps = 8/81 (9%)
Frame = +2
Query: 152 MVGSRVYVGGLPFGVRERDLEKFFKGFGRIRDILI--------KNGYGFVEFEDYRDADD 307
M G VYVG PF E DL +F G + ++ I G+ FVEF + A
Sbjct: 1 MSGFSVYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQR 60
Query: 308 AVYELNGKELLGERVVVEPAR 370
AV + NG + G + V A+
Sbjct: 61 AVDQFNGVDFNGRALRVNLAQ 81
Score = 31.5 bits (68), Expect = 0.58
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Frame = +2
Query: 476 YRLIVENLSSRISWQDLKDYMRQAGEVT----YADAHK-QHRNEGVVEFATHSDMRAAIE 640
+ + V N + + DL +Y QAG V+ D + R VEF + + A++
Sbjct: 4 FSVYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQRAVD 63
Query: 641 KLDGTELNGRRVRL 682
+ +G + NGR +R+
Sbjct: 64 QFNGVDFNGRALRV 77
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 41.5 bits (93), Expect = 5e-04
Identities = 21/71 (29%), Positives = 42/71 (59%), Gaps = 7/71 (9%)
Frame = +2
Query: 146 WKMVGSRVYVGGLPFGVRERDLEKFFKGFGRIRDI-LIKN------GYGFVEFEDYRDAD 304
++++ +R++VGG P E +L + F+ F ++D+ ++K+ GYGF+ FE D
Sbjct: 61 YELIPNRIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFET-EDQA 119
Query: 305 DAVYELNGKEL 337
+ + +L K+L
Sbjct: 120 EEIRKLTPKQL 130
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 41.5 bits (93), Expect = 5e-04
Identities = 21/71 (29%), Positives = 42/71 (59%), Gaps = 7/71 (9%)
Frame = +2
Query: 146 WKMVGSRVYVGGLPFGVRERDLEKFFKGFGRIRDI-LIKN------GYGFVEFEDYRDAD 304
++++ +R++VGG P E +L + F+ F ++D+ ++K+ GYGF+ FE D
Sbjct: 62 YELIPNRIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFET-EDQA 120
Query: 305 DAVYELNGKEL 337
+ + +L K+L
Sbjct: 121 EEIRKLTPKQL 131
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 41.1 bits (92), Expect = 7e-04
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 8/65 (12%)
Frame = +2
Query: 158 GSRVYVGGLPFGVRERDLEKFFKGFGRI--RDILIKN------GYGFVEFEDYRDADDAV 313
GS +YV G+P + +LE F+ FG+I IL N G GFV F+ +AD A+
Sbjct: 127 GSNLYVSGIPKSMTLHELESIFRPFGQIITSRILSDNVTGLSKGVGFVRFDKKDEADVAI 186
Query: 314 YELNG 328
LNG
Sbjct: 187 KTLNG 191
Score = 31.9 bits (69), Expect = 0.44
Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 8/78 (10%)
Frame = +2
Query: 161 SRVYVGGLPFGVRERDLEKFFKGFGRIRDI-LIKN-------GYGFVEFEDYRDADDAVY 316
+ + + LP G+ + ++ F G I L+++ GYGFV + DA AV
Sbjct: 42 TNLIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALRAVS 101
Query: 317 ELNGKELLGERVVVEPAR 370
NG L + + V AR
Sbjct: 102 SFNGLRLQNKTIKVSYAR 119
Score = 30.7 bits (66), Expect = 1.0
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +2
Query: 239 IRDILIK-NGYGFVEFEDYRDADDAVYELNGKELLGERVVV 358
+RD+ + GY FV +Y +A +A+ LNG L G+ + V
Sbjct: 406 LRDLTQQCKGYAFVSMSNYTEAYNAMLSLNGTNLAGKTLQV 446
>AF098993-1|AAC67471.2| 367|Caenorhabditis elegans Zinc finger
transcription factorfamily protein 4 protein.
Length = 367
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/62 (32%), Positives = 37/62 (59%), Gaps = 3/62 (4%)
Frame = +2
Query: 152 MVGSRVYVGGLPFGVRERD-LEKFFKGFGRIRDI--LIKNGYGFVEFEDYRDADDAVYEL 322
M+ +RV++G + + RD + + F+ FG+I + + G+GFV+F + AD++ L
Sbjct: 80 MIRARVFIGNIARAIITRDDIIELFRPFGKIIAVNYFAQQGFGFVQFNEAGSADESCRSL 139
Query: 323 NG 328
NG
Sbjct: 140 NG 141
>U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle
orientation defective protein4 protein.
Length = 351
Score = 40.3 bits (90), Expect = 0.001
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 6/75 (8%)
Frame = +2
Query: 161 SRVYVGGLPFGVRERDLEKFFKGFGRIRDILI------KNGYGFVEFEDYRDADDAVYEL 322
+R+YV +PF RE+DL F +GR+ + I G+GFV + + A L
Sbjct: 51 NRIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTNDRGSKGFGFVTLDSIESCEKARAAL 110
Query: 323 NGKELLGERVVVEPA 367
+ + G + V A
Sbjct: 111 HESHVQGRIIEVRRA 125
>AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein.
Length = 351
Score = 40.3 bits (90), Expect = 0.001
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 6/75 (8%)
Frame = +2
Query: 161 SRVYVGGLPFGVRERDLEKFFKGFGRIRDILI------KNGYGFVEFEDYRDADDAVYEL 322
+R+YV +PF RE+DL F +GR+ + I G+GFV + + A L
Sbjct: 51 NRIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTNDRGSKGFGFVTLDSIESCEKARAAL 110
Query: 323 NGKELLGERVVVEPA 367
+ + G + V A
Sbjct: 111 HESHVQGRIIEVRRA 125
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 39.9 bits (89), Expect = 0.002
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 8/78 (10%)
Frame = +2
Query: 158 GSRVYVGGLPFGVRERDLEKFFKGFGRIRDILI--------KNGYGFVEFEDYRDADDAV 313
G VYVG +P+ E ++ +F G + ++ I G+ FVEF + A AV
Sbjct: 5 GFSVYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEEAGAQRAV 64
Query: 314 YELNGKELLGERVVVEPA 367
+LNG G + V A
Sbjct: 65 EQLNGVAFNGRNLRVNYA 82
Score = 29.5 bits (63), Expect = 2.4
Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Frame = +2
Query: 476 YRLIVENLSSRISWQDLKDYMRQAGEVT-----YADAHKQHRNEGVVEFATHSDMRAAIE 640
+ + V N+ + + +++ +Y G V Y + R VEF+ + + A+E
Sbjct: 6 FSVYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEEAGAQRAVE 65
Query: 641 KLDGTELNGRRVRL 682
+L+G NGR +R+
Sbjct: 66 QLNGVAFNGRNLRV 79
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 8/63 (12%)
Frame = +2
Query: 161 SRVYVGGLPFGVRERDLEKFFKGFGRIRDILI--------KNGYGFVEFEDYRDADDAVY 316
++++VGGLP+ ++ L ++F+ FG I + ++ GYGFV +D A+ A
Sbjct: 35 TKIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERACK 94
Query: 317 ELN 325
+ N
Sbjct: 95 DPN 97
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 38.7 bits (86), Expect = 0.004
Identities = 28/76 (36%), Positives = 37/76 (48%), Gaps = 8/76 (10%)
Frame = +2
Query: 167 VYVGGLPFGVRERDLEKFFKGFGRIRDILIK--------NGYGFVEFEDYRDADDAVYEL 322
+YVGG V E+ L F FG + I I G+GFVEF+ DA A+ +
Sbjct: 13 LYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAEDAAMAIDNM 72
Query: 323 NGKELLGERVVVEPAR 370
N EL G+ + V AR
Sbjct: 73 NESELFGKTIRVNFAR 88
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2
Query: 578 QHRNEGVVEFATHSDMRAAIEKLDGTELNGRRVRL 682
+HR G VEF D AI+ ++ +EL G+ +R+
Sbjct: 50 KHRGFGFVEFDMAEDAAMAIDNMNESELFGKTIRV 84
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 38.7 bits (86), Expect = 0.004
Identities = 44/187 (23%), Positives = 76/187 (40%), Gaps = 13/187 (6%)
Frame = +2
Query: 161 SRVYVGGLPFGVRERDLEKFFKGFGRIRDILIK--------NGYGFVEFEDYRDADDAVY 316
SR+YVG + F +RE L + F FG I+ I + + FVE+E A A
Sbjct: 102 SRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQE 161
Query: 317 ELNGKELLGERVVVEPARGIDRSADRYRRGDRHXXXXXXXXXXXXXXPPTRTEYRLIVEN 496
+NG ++LG R + ++ ++ + +R+ V +
Sbjct: 162 SMNG-QMLG-------GRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSS 213
Query: 497 LSSRISWQDLKDYMRQAGEV-----TYADAHKQHRNEGVVEFATHSDMRAAIEKLDGTEL 661
+ +S DLK GE+ A + HR G +EF + AI ++ +L
Sbjct: 214 VHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGMNMFDL 273
Query: 662 NGRRVRL 682
G+ +R+
Sbjct: 274 GGQYLRV 280
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 38.7 bits (86), Expect = 0.004
Identities = 44/187 (23%), Positives = 76/187 (40%), Gaps = 13/187 (6%)
Frame = +2
Query: 161 SRVYVGGLPFGVRERDLEKFFKGFGRIRDILIK--------NGYGFVEFEDYRDADDAVY 316
SR+YVG + F +RE L + F FG I+ I + + FVE+E A A
Sbjct: 102 SRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQE 161
Query: 317 ELNGKELLGERVVVEPARGIDRSADRYRRGDRHXXXXXXXXXXXXXXPPTRTEYRLIVEN 496
+NG ++LG R + ++ ++ + +R+ V +
Sbjct: 162 SMNG-QMLG-------GRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSS 213
Query: 497 LSSRISWQDLKDYMRQAGEV-----TYADAHKQHRNEGVVEFATHSDMRAAIEKLDGTEL 661
+ +S DLK GE+ A + HR G +EF + AI ++ +L
Sbjct: 214 VHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGMNMFDL 273
Query: 662 NGRRVRL 682
G+ +R+
Sbjct: 274 GGQYLRV 280
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 38.3 bits (85), Expect = 0.005
Identities = 44/186 (23%), Positives = 75/186 (40%), Gaps = 13/186 (6%)
Frame = +2
Query: 161 SRVYVGGLPFGVRERDLEKFFKGFGRIRDILIK--------NGYGFVEFEDYRDADDAVY 316
SR+YVG + F +RE L + F FG I+ I + + FVE+E A A
Sbjct: 102 SRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQE 161
Query: 317 ELNGKELLGERVVVEPARGIDRSADRYRRGDRHXXXXXXXXXXXXXXPPTRTEYRLIVEN 496
+NG ++LG R + ++ ++ + +R+ V +
Sbjct: 162 SMNG-QMLG-------GRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSS 213
Query: 497 LSSRISWQDLKDYMRQAGEV-----TYADAHKQHRNEGVVEFATHSDMRAAIEKLDGTEL 661
+ +S DLK GE+ A + HR G +EF + AI ++ +L
Sbjct: 214 VHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGMNMFDL 273
Query: 662 NGRRVR 679
G+ +R
Sbjct: 274 GGQYLR 279
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 37.9 bits (84), Expect = 0.007
Identities = 20/76 (26%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Frame = +2
Query: 167 VYVGGLPFGVRERDLEKFFKGFGRIRDILIKN-------GYGFVEFEDYRDADDAVYELN 325
++VG + + E L + F+ +G+I+ + + + GY F+E+ D + A + +
Sbjct: 106 LFVGRINYETSESKLRREFEAYGKIKKLTMVHDEAGKPRGYAFIEYSDKAEMHTAYKKAD 165
Query: 326 GKELLGERVVVEPARG 373
G ++ G+R+VV+ RG
Sbjct: 166 GIKVDGKRLVVDYERG 181
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 37.9 bits (84), Expect = 0.007
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 8/57 (14%)
Frame = +2
Query: 164 RVYVGGLPFGVRERDLEKFFKGFGRIRDI--------LIKNGYGFVEFEDYRDADDA 310
+V+VGGLP E+DL F+ FG++ DI + + F+ FE+ AD A
Sbjct: 111 KVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKA 167
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 37.9 bits (84), Expect = 0.007
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 8/57 (14%)
Frame = +2
Query: 164 RVYVGGLPFGVRERDLEKFFKGFGRIRDI--------LIKNGYGFVEFEDYRDADDA 310
+V+VGGLP E+DL F+ FG++ DI + + F+ FE+ AD A
Sbjct: 111 KVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKA 167
>AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical
protein ZK616.1 protein.
Length = 491
Score = 37.9 bits (84), Expect = 0.007
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 4/74 (5%)
Frame = +2
Query: 161 SRVYVGGLPFGVRERDLEKFFKGFGRIRDILIK----NGYGFVEFEDYRDADDAVYELNG 328
S V+V G+ + + +L ++ FG I D +++ +GYGFV F+ +A + E++G
Sbjct: 96 SNVFVRGISRDMPDTEL---YQAFGGITDGVVQCHVADGYGFVLFDTRANAQKKIVEMDG 152
Query: 329 KELLGERVVVEPAR 370
K L G+ + V AR
Sbjct: 153 KTLNGKLISVSWAR 166
>Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 37.1 bits (82), Expect = 0.012
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 8/73 (10%)
Frame = +2
Query: 167 VYVGGLPFGVRERDLEKFFKGFGRIRDILIK--------NGYGFVEFEDYRDADDAVYEL 322
V+V + E D+ F +G+I++I + GY VE+E ++A++A+ +
Sbjct: 57 VFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYETQKEANEAIDQS 116
Query: 323 NGKELLGERVVVE 361
N +LLG+ V V+
Sbjct: 117 NDTDLLGQNVKVD 129
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 37.1 bits (82), Expect = 0.012
Identities = 21/76 (27%), Positives = 40/76 (52%), Gaps = 7/76 (9%)
Frame = +2
Query: 161 SRVYVGGLPFGVRERDLEKFFKGFGRIRDILIK-------NGYGFVEFEDYRDADDAVYE 319
+++++GGLP + E +++ FG ++ + GY F E+ D D A+
Sbjct: 291 NKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAG 350
Query: 320 LNGKELLGERVVVEPA 367
LNG +L +++VV+ A
Sbjct: 351 LNGMQLGDKQLVVQLA 366
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 37.1 bits (82), Expect = 0.012
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 8/88 (9%)
Frame = +2
Query: 173 VGGLPFGVRERDLEKFFKGFGRIRDILI--------KNGYGFVEFEDYRDADDAVYELNG 328
+ L + DL + F+ +G I D+ I G+GFV F + RDA+ A+ +G
Sbjct: 23 IDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALDRTDG 82
Query: 329 KELLGERVVVEPARGIDRSADRYRRGDR 412
K + G + V A+ DR +D RG R
Sbjct: 83 KLVDGRELRVTLAK-YDRPSD--ERGGR 107
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 37.1 bits (82), Expect = 0.012
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 8/88 (9%)
Frame = +2
Query: 173 VGGLPFGVRERDLEKFFKGFGRIRDILI--------KNGYGFVEFEDYRDADDAVYELNG 328
+ L + DL + F+ +G I D+ I G+GFV F + RDA+ A+ +G
Sbjct: 23 IDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALDRTDG 82
Query: 329 KELLGERVVVEPARGIDRSADRYRRGDR 412
K + G + V A+ DR +D RG R
Sbjct: 83 KLVDGRELRVTLAK-YDRPSD--ERGGR 107
>U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 5 protein.
Length = 289
Score = 37.1 bits (82), Expect = 0.012
Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 9/79 (11%)
Frame = +2
Query: 164 RVYVGGLPFGVRERDLEKFFKGFGRIRDI---------LIKNGYGFVEFEDYRDADDAVY 316
RV + L V + LE+ F +G I+++ + GYG+VE+++ DA+ ++
Sbjct: 134 RVVIKNLSRNVLKTHLEEIFSIYGAIKNVDLPPDRFHNHVHRGYGYVEYDNLEDAEKSIK 193
Query: 317 ELNGKELLGERVVVEPARG 373
++G ++ G V VE G
Sbjct: 194 HMDGGQIDGMAVHVEMTIG 212
Score = 31.5 bits (68), Expect = 0.58
Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 6/74 (8%)
Frame = +2
Query: 479 RLIVENLSSRISWQDLKDYMRQAGEVTYADA-----HKQ-HRNEGVVEFATHSDMRAAIE 640
R++++NLS + L++ G + D H HR G VE+ D +I+
Sbjct: 134 RVVIKNLSRNVLKTHLEEIFSIYGAIKNVDLPPDRFHNHVHRGYGYVEYDNLEDAEKSIK 193
Query: 641 KLDGTELNGRRVRL 682
+DG +++G V +
Sbjct: 194 HMDGGQIDGMAVHV 207
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 37.1 bits (82), Expect = 0.012
Identities = 21/76 (27%), Positives = 40/76 (52%), Gaps = 7/76 (9%)
Frame = +2
Query: 161 SRVYVGGLPFGVRERDLEKFFKGFGRIRDILIK-------NGYGFVEFEDYRDADDAVYE 319
+++++GGLP + E +++ FG ++ + GY F E+ D D A+
Sbjct: 291 NKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAG 350
Query: 320 LNGKELLGERVVVEPA 367
LNG +L +++VV+ A
Sbjct: 351 LNGMQLGDKQLVVQLA 366
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 37.1 bits (82), Expect = 0.012
Identities = 21/76 (27%), Positives = 40/76 (52%), Gaps = 7/76 (9%)
Frame = +2
Query: 161 SRVYVGGLPFGVRERDLEKFFKGFGRIRDILIK-------NGYGFVEFEDYRDADDAVYE 319
+++++GGLP + E +++ FG ++ + GY F E+ D D A+
Sbjct: 266 NKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAG 325
Query: 320 LNGKELLGERVVVEPA 367
LNG +L +++VV+ A
Sbjct: 326 LNGMQLGDKQLVVQLA 341
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 37.1 bits (82), Expect = 0.012
Identities = 21/76 (27%), Positives = 40/76 (52%), Gaps = 7/76 (9%)
Frame = +2
Query: 161 SRVYVGGLPFGVRERDLEKFFKGFGRIRDILIK-------NGYGFVEFEDYRDADDAVYE 319
+++++GGLP + E +++ FG ++ + GY F E+ D D A+
Sbjct: 269 NKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAG 328
Query: 320 LNGKELLGERVVVEPA 367
LNG +L +++VV+ A
Sbjct: 329 LNGMQLGDKQLVVQLA 344
>Z81038-2|CAB02757.1| 454|Caenorhabditis elegans Hypothetical
protein C25A1.4 protein.
Length = 454
Score = 36.7 bits (81), Expect = 0.016
Identities = 21/65 (32%), Positives = 31/65 (47%)
Frame = +2
Query: 482 LIVENLSSRISWQDLKDYMRQAGEVTYADAHKQHRNEGVVEFATHSDMRAAIEKLDGTEL 661
+I+ NL S +WQ ++D +R GEV D + FAT D A L G+ +
Sbjct: 387 IIIRNLPSDYTWQIVRDRVRNFGEVDSVD--MMAPGAARIRFATFQDAERARAALYGSTV 444
Query: 662 NGRRV 676
GR +
Sbjct: 445 EGRMI 449
>Z78019-5|CAB01455.1| 305|Caenorhabditis elegans Hypothetical
protein ZK863.7 protein.
Length = 305
Score = 36.7 bits (81), Expect = 0.016
Identities = 20/67 (29%), Positives = 35/67 (52%)
Frame = +2
Query: 161 SRVYVGGLPFGVRERDLEKFFKGFGRIRDILIKNGYGFVEFEDYRDADDAVYELNGKELL 340
S+++VG LP V L++ F+ F ++ + I Y FV E+ D D + L G +
Sbjct: 3 SKLFVGNLPDNVDSNKLKQVFQPFCKVTECDIVKNYAFVHIEE-DDVDPIITRLTGYTID 61
Query: 341 GERVVVE 361
G+ V ++
Sbjct: 62 GKVVNIK 68
>U21302-2|AAA92287.1| 305|Caenorhabditis elegans RNP-1 protein.
Length = 305
Score = 36.7 bits (81), Expect = 0.016
Identities = 20/67 (29%), Positives = 35/67 (52%)
Frame = +2
Query: 161 SRVYVGGLPFGVRERDLEKFFKGFGRIRDILIKNGYGFVEFEDYRDADDAVYELNGKELL 340
S+++VG LP V L++ F+ F ++ + I Y FV E+ D D + L G +
Sbjct: 3 SKLFVGNLPDNVDSNKLKQVFQPFCKVTECDIVKNYAFVHIEE-DDVDPIITRLTGYTID 61
Query: 341 GERVVVE 361
G+ V ++
Sbjct: 62 GKVVNIK 68
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 36.3 bits (80), Expect = 0.021
Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 8/83 (9%)
Frame = +2
Query: 167 VYVGGLPFGVRERDLEKFFKGFGRI------RDILIKN--GYGFVEFEDYRDADDAVYEL 322
+YVGGL V E L + G + +D + N G+GFVEF DAD A+ L
Sbjct: 15 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKIL 74
Query: 323 NGKELLGERVVVEPARGIDRSAD 391
N +L G+ + V A +++ D
Sbjct: 75 NMIKLYGKPIKVNKASAHEKNMD 97
Score = 36.3 bits (80), Expect = 0.021
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 9/90 (10%)
Frame = +2
Query: 155 VGSRVYVGGLPFGVRERDLEKFFKGFGRI-------RDI--LIKNGYGFVEFEDYRDADD 307
VG+ ++VG L V E+ L F FG I RD+ G+ F+ F + +D
Sbjct: 98 VGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDT 157
Query: 308 AVYELNGKELLGERVVVEPARGIDRSADRY 397
A+ +NG+ L + V A D +R+
Sbjct: 158 ALEAMNGQFLCNRAITVSYAFKRDSKGERH 187
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 36.3 bits (80), Expect = 0.021
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 8/71 (11%)
Frame = +2
Query: 167 VYVGGLPFGVRERDLEKFFKGFGRIRDILI--------KNGYGFVEFEDYRDADDAVYEL 322
V+VG L V + L + F+ FG + D + GYGFV + +A+ A+ ++
Sbjct: 24 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 83
Query: 323 NGKELLGERVV 355
NG + LG R +
Sbjct: 84 NG-QWLGRRTI 93
Score = 30.3 bits (65), Expect = 1.3
Identities = 19/77 (24%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Frame = +2
Query: 464 TRTEYRLIVENLSSRISWQDLKDYMRQAGEVTYADAHK-----QHRNEGVVEFATHSDMR 628
T + + V +LSS + Q L++ + G+V+ A + + + G V + +
Sbjct: 18 TTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAE 77
Query: 629 AAIEKLDGTELNGRRVR 679
AIE+++G L R +R
Sbjct: 78 RAIEQMNGQWLGRRTIR 94
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 36.3 bits (80), Expect = 0.021
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 8/71 (11%)
Frame = +2
Query: 167 VYVGGLPFGVRERDLEKFFKGFGRIRDILI--------KNGYGFVEFEDYRDADDAVYEL 322
V+VG L V + L + F+ FG + D + GYGFV + +A+ A+ ++
Sbjct: 34 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 93
Query: 323 NGKELLGERVV 355
NG + LG R +
Sbjct: 94 NG-QWLGRRTI 103
Score = 30.3 bits (65), Expect = 1.3
Identities = 19/77 (24%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Frame = +2
Query: 464 TRTEYRLIVENLSSRISWQDLKDYMRQAGEVTYADAHK-----QHRNEGVVEFATHSDMR 628
T + + V +LSS + Q L++ + G+V+ A + + + G V + +
Sbjct: 28 TTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAE 87
Query: 629 AAIEKLDGTELNGRRVR 679
AIE+++G L R +R
Sbjct: 88 RAIEQMNGQWLGRRTIR 104
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 36.3 bits (80), Expect = 0.021
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 8/71 (11%)
Frame = +2
Query: 167 VYVGGLPFGVRERDLEKFFKGFGRIRDILI--------KNGYGFVEFEDYRDADDAVYEL 322
V+VG L V + L + F+ FG + D + GYGFV + +A+ A+ ++
Sbjct: 137 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 196
Query: 323 NGKELLGERVV 355
NG + LG R +
Sbjct: 197 NG-QWLGRRTI 206
Score = 33.1 bits (72), Expect = 0.19
Identities = 42/181 (23%), Positives = 73/181 (40%), Gaps = 10/181 (5%)
Frame = +2
Query: 167 VYVGGLPFGVRERDLEKFFKGFGRI-RDILIKNG----YGFVEFEDYRDADDAVYELNGK 331
+YVG L V E + F G + + +I +G Y FVEF D+ A A+ +N +
Sbjct: 48 LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDGSNDPYAFVEFSDHGQASQALQTMNKR 107
Query: 332 ELLGERVVVEPARGIDRSADRYRRGDRHXXXXXXXXXXXXXXPPTRTEYRLIVENLSSRI 511
LL + V A + + T + + V +LSS +
Sbjct: 108 LLLDREMKVNWAVEPGQQQSKI---------------------DTTRHFHVFVGDLSSEV 146
Query: 512 SWQDLKDYMRQAGEVTYADAHK-----QHRNEGVVEFATHSDMRAAIEKLDGTELNGRRV 676
Q L++ + G+V+ A + + + G V + + AIE+++G L R +
Sbjct: 147 DNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTI 206
Query: 677 R 679
R
Sbjct: 207 R 207
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 36.3 bits (80), Expect = 0.021
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 8/71 (11%)
Frame = +2
Query: 167 VYVGGLPFGVRERDLEKFFKGFGRIRDILI--------KNGYGFVEFEDYRDADDAVYEL 322
V+VG L V + L + F+ FG + D + GYGFV + +A+ A+ ++
Sbjct: 105 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 164
Query: 323 NGKELLGERVV 355
NG + LG R +
Sbjct: 165 NG-QWLGRRTI 174
Score = 30.3 bits (65), Expect = 1.3
Identities = 19/77 (24%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Frame = +2
Query: 464 TRTEYRLIVENLSSRISWQDLKDYMRQAGEVTYADAHK-----QHRNEGVVEFATHSDMR 628
T + + V +LSS + Q L++ + G+V+ A + + + G V + +
Sbjct: 99 TTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAE 158
Query: 629 AAIEKLDGTELNGRRVR 679
AIE+++G L R +R
Sbjct: 159 RAIEQMNGQWLGRRTIR 175
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 36.3 bits (80), Expect = 0.021
Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 8/83 (9%)
Frame = +2
Query: 167 VYVGGLPFGVRERDLEKFFKGFGRI------RDILIKN--GYGFVEFEDYRDADDAVYEL 322
+YVGGL V E L + G + +D + N G+GFVEF DAD A+ L
Sbjct: 25 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKIL 84
Query: 323 NGKELLGERVVVEPARGIDRSAD 391
N +L G+ + V A +++ D
Sbjct: 85 NMIKLYGKPIKVNKASAHEKNMD 107
Score = 36.3 bits (80), Expect = 0.021
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 9/90 (10%)
Frame = +2
Query: 155 VGSRVYVGGLPFGVRERDLEKFFKGFGRI-------RDI--LIKNGYGFVEFEDYRDADD 307
VG+ ++VG L V E+ L F FG I RD+ G+ F+ F + +D
Sbjct: 108 VGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDT 167
Query: 308 AVYELNGKELLGERVVVEPARGIDRSADRY 397
A+ +NG+ L + V A D +R+
Sbjct: 168 ALEAMNGQFLCNRAITVSYAFKRDSKGERH 197
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 36.3 bits (80), Expect = 0.021
Identities = 20/68 (29%), Positives = 31/68 (45%)
Frame = +2
Query: 167 VYVGGLPFGVRERDLEKFFKGFGRIRDILIKNGYGFVEFEDYRDADDAVYELNGKELLGE 346
+Y+ + V E L + FK + + + Y F+ F + D A+ E NGKEL G
Sbjct: 379 LYIRNIKEAVTEEKLNELFKEYASLDRVKKVKDYAFIHFNERDDCLKAMEEWNGKELEGT 438
Query: 347 RVVVEPAR 370
V A+
Sbjct: 439 VVEASLAK 446
Score = 31.1 bits (67), Expect = 0.77
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 8/68 (11%)
Frame = +2
Query: 158 GSRVYVGGLPFGVRERDLEKFFKGFGRIRDILI--------KNGYGFVEFEDYRDADDAV 313
G +YVG +P V E L F+ G+I D+ + GY FV + + DA A
Sbjct: 199 GHEIYVGHIPTDVFEDTLVPLFEKSGKIWDLRLMMDPMSGASRGYAFVTYCNKEDAAAAA 258
Query: 314 YELNGKEL 337
+G E+
Sbjct: 259 KTYDGHEI 266
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 36.3 bits (80), Expect = 0.021
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = +2
Query: 158 GSRVYVGGLPFGVRERD-LEKFFKGFGRIRDILI---KNGYGFVEFEDYRDADDAVYELN 325
G ++ + G+ GV D L +F+ FG + + I G GFV +ED AD + +
Sbjct: 146 GCKLLLNGITNGVHSVDSLRVYFETFGTLDQVEILGQPRGLGFVIYEDKESADRCLAHNS 205
Query: 326 GKELLGERVV 355
G+ ++ ER +
Sbjct: 206 GRHIVNERKI 215
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 36.3 bits (80), Expect = 0.021
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = +2
Query: 158 GSRVYVGGLPFGVRERD-LEKFFKGFGRIRDILI---KNGYGFVEFEDYRDADDAVYELN 325
G ++ + G+ GV D L +F+ FG + + I G GFV +ED AD + +
Sbjct: 166 GCKLLLNGITNGVHSVDSLRVYFETFGTLDQVEILGQPRGLGFVIYEDKESADRCLAHNS 225
Query: 326 GKELLGERVV 355
G+ ++ ER +
Sbjct: 226 GRHIVNERKI 235
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 36.3 bits (80), Expect = 0.021
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = +2
Query: 158 GSRVYVGGLPFGVRERD-LEKFFKGFGRIRDILI---KNGYGFVEFEDYRDADDAVYELN 325
G ++ + G+ GV D L +F+ FG + + I G GFV +ED AD + +
Sbjct: 167 GCKLLLNGITNGVHSVDSLRVYFETFGTLDQVEILGQPRGLGFVIYEDKESADRCLAHNS 226
Query: 326 GKELLGERVV 355
G+ ++ ER +
Sbjct: 227 GRHIVNERKI 236
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 35.9 bits (79), Expect = 0.027
Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 8/88 (9%)
Frame = +2
Query: 149 KMVGSRVYVGGLPFGVRERDLEKFFKGFGRIRDILI-------KNGYGFVEFEDYRDADD 307
K G +YV L V + L+K F+ +G I + G+GFV FE +A
Sbjct: 253 KYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATS 312
Query: 308 AVYELNGKELLGERVVVEPA-RGIDRSA 388
AV E+N K + + + V A R DR A
Sbjct: 313 AVTEMNSKMVCSKPLYVAIAQRKEDRRA 340
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 35.9 bits (79), Expect = 0.027
Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 8/88 (9%)
Frame = +2
Query: 149 KMVGSRVYVGGLPFGVRERDLEKFFKGFGRIRDILI-------KNGYGFVEFEDYRDADD 307
K G +YV L V + L+K F+ +G I + G+GFV FE +A
Sbjct: 250 KYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATS 309
Query: 308 AVYELNGKELLGERVVVEPA-RGIDRSA 388
AV E+N K + + + V A R DR A
Sbjct: 310 AVTEMNSKMVCSKPLYVAIAQRKEDRRA 337
Score = 34.3 bits (75), Expect = 0.083
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +2
Query: 263 GYGFVEFEDYRDADDAVYELNGKELLGERVVV 358
GYGFV FE A +A+ ++NG L G++V V
Sbjct: 98 GYGFVHFETEEAAQNAIQKVNGMLLAGKKVFV 129
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 35.9 bits (79), Expect = 0.027
Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 8/88 (9%)
Frame = +2
Query: 149 KMVGSRVYVGGLPFGVRERDLEKFFKGFGRIRDILI-------KNGYGFVEFEDYRDADD 307
K G +YV L V + L+K F+ +G I + G+GFV FE +A
Sbjct: 313 KYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATS 372
Query: 308 AVYELNGKELLGERVVVEPA-RGIDRSA 388
AV E+N K + + + V A R DR A
Sbjct: 373 AVTEMNSKMVCSKPLYVAIAQRKEDRRA 400
Score = 34.3 bits (75), Expect = 0.083
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +2
Query: 263 GYGFVEFEDYRDADDAVYELNGKELLGERVVV 358
GYGFV FE A +A+ ++NG L G++V V
Sbjct: 161 GYGFVHFETEEAAQNAIQKVNGMLLAGKKVFV 192
>Z99279-4|CAB16494.1| 121|Caenorhabditis elegans Hypothetical
protein Y57G11A.5 protein.
Length = 121
Score = 35.5 bits (78), Expect = 0.036
Identities = 31/94 (32%), Positives = 42/94 (44%), Gaps = 14/94 (14%)
Frame = +2
Query: 164 RVYVGGLPFGVRERDL-----------EKFFKGFGRIRDILIKN---GYGFVEFEDYRDA 301
+VYVG +PF E++L E F G I+ I + G+ FV F+ A
Sbjct: 18 QVYVGNMPFDATEKELNNDALTIYDAIEAVFSVMGPIKSIWMAKRPPGFAFVTFKRTVHA 77
Query: 302 DDAVYELNGKELLGERVVVEPARGIDRSADRYRR 403
DAV LNGK++ VE +D D RR
Sbjct: 78 FDAVKYLNGKKICDLEAKVEMCE-VDFKEDLRRR 110
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 35.5 bits (78), Expect = 0.036
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Frame = +2
Query: 488 VENLSSRISWQDLKDYMRQAGEVTYAD-----AHKQHRNEGVVEFATHSDMRAAIEKLDG 652
V NLSS + +DL+D + GE+ D R G + F D AA +KL
Sbjct: 80 VFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYFNLIEDATAARDKLCN 139
Query: 653 TELNGRRVRL 682
T+L+G ++R+
Sbjct: 140 TDLDGHKIRV 149
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 35.1 bits (77), Expect = 0.047
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Frame = +2
Query: 167 VYVGGLPFGVRERDLEKFFKGFGRIRDI-LIK-NGYGFVEFEDYRDADDAVYELNGKELL 340
VYVG + + E ++ + F FG I ++ K GY FV+FE A A+ ++N ++
Sbjct: 258 VYVGNIA-NLGEDEIRRAFDRFGPINEVRTFKIQGYAFVKFETKESAARAIVQMNNADIG 316
Query: 341 GERV 352
G+ V
Sbjct: 317 GQIV 320
Score = 34.7 bits (76), Expect = 0.063
Identities = 35/147 (23%), Positives = 60/147 (40%), Gaps = 5/147 (3%)
Frame = +2
Query: 254 IKNGYGFVEFEDYRDADDAVYELNGKELLGERVVVEPARGIDRSADRYRRGDRHXXXXXX 433
+ + Y FVEF D+ A A+ NG+ELL E + + + G+
Sbjct: 76 LNDPYAFVEFSDHNQATLALQSHNGRELL------EKEMHVTWAFEPREPGENR------ 123
Query: 434 XXXXXXXXPPTRTEYRLIVENLSSRISWQDLKDYMRQAGEVTYADAHKQH-----RNEGV 598
P T + + V +L S I L++ + GEV+ A + + + G
Sbjct: 124 ------SKPETSRHFHVFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGF 177
Query: 599 VEFATHSDMRAAIEKLDGTELNGRRVR 679
V + D AI++++G L R +R
Sbjct: 178 VSYPRREDAERAIDEMNGAWLGRRTIR 204
Score = 33.9 bits (74), Expect = 0.11
Identities = 28/90 (31%), Positives = 38/90 (42%), Gaps = 8/90 (8%)
Frame = +2
Query: 167 VYVGGLPFGVRERDLEKFFKGFGRIRDILI--------KNGYGFVEFEDYRDADDAVYEL 322
V+VG L + L + F FG + + I GYGFV + DA+ A+ E+
Sbjct: 134 VFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSYPRREDAERAIDEM 193
Query: 323 NGKELLGERVVVEPARGIDRSADRYRRGDR 412
NG LG R + D R GDR
Sbjct: 194 NG-AWLGRRTIRTNWATRKPDEDGERGGDR 222
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 34.7 bits (76), Expect = 0.063
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
Frame = +2
Query: 149 KMVGSRVYVGGLPFGVRERDLEKFFKGFGRIRDILI-------KNGYGFVEFEDYRDADD 307
K G +YV L V + L+K F+ +G I + G+GFV FE +A
Sbjct: 313 KYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATS 372
Query: 308 AVYELNGKELLGERVVV 358
AV E+N K + + + V
Sbjct: 373 AVTEMNSKMVCSKPLYV 389
Score = 34.3 bits (75), Expect = 0.083
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +2
Query: 263 GYGFVEFEDYRDADDAVYELNGKELLGERVVV 358
GYGFV FE A +A+ ++NG L G++V V
Sbjct: 161 GYGFVHFETEEAAQNAIQKVNGMLLAGKKVFV 192
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 34.3 bits (75), Expect = 0.083
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 8/81 (9%)
Frame = +2
Query: 164 RVYVGGLPFGVRERDLEKFFKGFGRIRDILI--------KNGYGFVEFEDYRDADDAVYE 319
+++VGGL + + +F+ FG I DI++ G+GFV F + D A+ +
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Query: 320 LNGKELLGERVVVEPARGIDR 382
+ + + V+P R + R
Sbjct: 84 ---RPHIIDGKTVDPKRAVPR 101
Score = 27.5 bits (58), Expect = 9.5
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 8/60 (13%)
Frame = +2
Query: 164 RVYVGGLPFGVRERDLEKFFKGFGRIRD---ILIK-----NGYGFVEFEDYRDADDAVYE 319
R+YV G+ E L ++F +G + IL K G+GFV F+D+ D V +
Sbjct: 115 RLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQ 174
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 34.3 bits (75), Expect = 0.083
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 8/81 (9%)
Frame = +2
Query: 164 RVYVGGLPFGVRERDLEKFFKGFGRIRDILI--------KNGYGFVEFEDYRDADDAVYE 319
+++VGGL + + +F+ FG I DI++ G+GFV F + D A+ +
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Query: 320 LNGKELLGERVVVEPARGIDR 382
+ + + V+P R + R
Sbjct: 84 ---RPHIIDGKTVDPKRAVPR 101
Score = 27.5 bits (58), Expect = 9.5
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 8/60 (13%)
Frame = +2
Query: 164 RVYVGGLPFGVRERDLEKFFKGFGRIRD---ILIK-----NGYGFVEFEDYRDADDAVYE 319
R+YV G+ E L ++F +G + IL K G+GFV F+D+ D V +
Sbjct: 115 RLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQ 174
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 34.3 bits (75), Expect = 0.083
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 8/81 (9%)
Frame = +2
Query: 164 RVYVGGLPFGVRERDLEKFFKGFGRIRDILI--------KNGYGFVEFEDYRDADDAVYE 319
+++VGGL + + +F+ FG I DI++ G+GFV F + D A+ +
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Query: 320 LNGKELLGERVVVEPARGIDR 382
+ + + V+P R + R
Sbjct: 84 ---RPHIIDGKTVDPKRAVPR 101
Score = 27.5 bits (58), Expect = 9.5
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 8/60 (13%)
Frame = +2
Query: 164 RVYVGGLPFGVRERDLEKFFKGFGRIRD---ILIK-----NGYGFVEFEDYRDADDAVYE 319
R+YV G+ E L ++F +G + IL K G+GFV F+D+ D V +
Sbjct: 115 RLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQ 174
>Z77669-6|CAB01243.2| 371|Caenorhabditis elegans Hypothetical
protein T07F10.3 protein.
Length = 371
Score = 33.5 bits (73), Expect = 0.14
Identities = 18/66 (27%), Positives = 35/66 (53%), Gaps = 7/66 (10%)
Frame = +2
Query: 167 VYVGGLPFGVRERDLEKFFKGFG----RIRDILIKN---GYGFVEFEDYRDADDAVYELN 325
+++G +P E L + F G +++ + +K+ GY F+EF + +A +Y+LN
Sbjct: 70 LWIGDVPTDWTEETLSQVFTECGHAPYKVKRVYVKDELKGYCFIEFITFDEARQTLYDLN 129
Query: 326 GKELLG 343
G + G
Sbjct: 130 GNRIPG 135
>U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya binding
family protein 2 protein.
Length = 422
Score = 33.5 bits (73), Expect = 0.14
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = +2
Query: 164 RVYVGGLPFGVRERDLEKFFKGFGRIR 244
+V+VGGLP V+E D+ FF +GR++
Sbjct: 89 KVFVGGLPSCVKESDILNFFSRYGRLQ 115
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 33.1 bits (72), Expect = 0.19
Identities = 18/68 (26%), Positives = 35/68 (51%)
Frame = +2
Query: 479 RLIVENLSSRISWQDLKDYMRQAGEVTYADAHKQHRNEGVVEFATHSDMRAAIEKLDGTE 658
RL V NL + + +LK+ G++ A+ + + + T + +A E +DG
Sbjct: 117 RLFVGNLPNEVKETELKELFSPHGDI--AECYLSGKGFAFLRLDTRAHAESAKEAIDGRI 174
Query: 659 LNGRRVRL 682
++GR+VR+
Sbjct: 175 IHGRQVRV 182
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 33.1 bits (72), Expect = 0.19
Identities = 18/68 (26%), Positives = 35/68 (51%)
Frame = +2
Query: 479 RLIVENLSSRISWQDLKDYMRQAGEVTYADAHKQHRNEGVVEFATHSDMRAAIEKLDGTE 658
RL V NL + + +LK+ G++ A+ + + + T + +A E +DG
Sbjct: 117 RLFVGNLPNEVKETELKELFSPHGDI--AECYLSGKGFAFLRLDTRAHAESAKEAIDGRI 174
Query: 659 LNGRRVRL 682
++GR+VR+
Sbjct: 175 IHGRQVRV 182
>AC084197-23|AAM44389.1| 610|Caenorhabditis elegans Hypothetical
protein Y73B6BL.33 protein.
Length = 610
Score = 33.1 bits (72), Expect = 0.19
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 5/65 (7%)
Frame = +2
Query: 179 GLPFGVRERDLEKFFKG--FGRIRDILI---KNGYGFVEFEDYRDADDAVYELNGKELLG 343
GLPF E+D+ +FF G R++ + NG +VEF++ +A A+ E + KE+
Sbjct: 70 GLPFNATEKDIHEFFAGLTIERVKFVCTTGRPNGEAYVEFKNTEEAGKAM-ENDRKEISN 128
Query: 344 ERVVV 358
+ V
Sbjct: 129 RYIEV 133
>Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical
protein R05H10.2 protein.
Length = 608
Score = 32.7 bits (71), Expect = 0.25
Identities = 18/75 (24%), Positives = 35/75 (46%), Gaps = 9/75 (12%)
Frame = +2
Query: 164 RVYVGGLPFGVRERDLEKFFKGFGRIRDILIKN---------GYGFVEFEDYRDADDAVY 316
R+ + LPF ++ DL+ G+ +I++ G+GF++F + DA+
Sbjct: 96 RLIIRNLPFKTKKEDLQNLCSNIGKFVEIVLPPSRKDPKTCAGFGFIQFVEKADAEKGRE 155
Query: 317 ELNGKELLGERVVVE 361
N ++LG V +
Sbjct: 156 FFNTNKVLGRSVAAD 170
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 32.3 bits (70), Expect = 0.33
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 8/65 (12%)
Frame = +2
Query: 167 VYVGGLPFGVRERDLEKFFKGFGRIRDI-LIKN-------GYGFVEFEDYRDADDAVYEL 322
+Y+GGL + + E D+ F +G + +I LI++ G+ F+ ++D R AV
Sbjct: 40 IYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQRSTILAVDNF 99
Query: 323 NGKEL 337
NG L
Sbjct: 100 NGISL 104
>AL032626-17|CAA21536.1| 282|Caenorhabditis elegans Hypothetical
protein Y37D8A.21 protein.
Length = 282
Score = 32.3 bits (70), Expect = 0.33
Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 6/85 (7%)
Frame = +2
Query: 167 VYVGGLPFGVRERDLEKFFKGFGRI-----RDILIKNG-YGFVEFEDYRDADDAVYELNG 328
+YV V E LE+ F G + RD+ N + VEFED A+ +NG
Sbjct: 15 IYVANFSEEVDEELLEELFIQAGPVVKVILRDVRDSNAKFALVEFEDELSVLFAIELMNG 74
Query: 329 KELLGERVVVEPARGIDRSADRYRR 403
L + + V+P G ++ + Y+R
Sbjct: 75 VRLFNQELQVKPRNGTNQE-ELYKR 98
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 31.9 bits (69), Expect = 0.44
Identities = 17/70 (24%), Positives = 35/70 (50%), Gaps = 12/70 (17%)
Frame = +2
Query: 164 RVYVGGLPFGVRERDLEKFFKGFGRIRDILI--------KNGYGFVEFEDYRDADDAV-- 313
++++GGL + +L +F FG + + ++ G+GF+ F D D +
Sbjct: 46 KMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNN 105
Query: 314 --YELNGKEL 337
+EL+GK++
Sbjct: 106 REHELDGKKI 115
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 31.9 bits (69), Expect = 0.44
Identities = 17/70 (24%), Positives = 35/70 (50%), Gaps = 12/70 (17%)
Frame = +2
Query: 164 RVYVGGLPFGVRERDLEKFFKGFGRIRDILI--------KNGYGFVEFEDYRDADDAV-- 313
++++GGL + +L +F FG + + ++ G+GF+ F D D +
Sbjct: 46 KMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNN 105
Query: 314 --YELNGKEL 337
+EL+GK++
Sbjct: 106 REHELDGKKI 115
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 31.5 bits (68), Expect = 0.58
Identities = 36/144 (25%), Positives = 56/144 (38%), Gaps = 4/144 (2%)
Frame = +2
Query: 263 GYGFVEFEDYRDADDAVYELNGKELLGERVVVEPARGIDRSADRYRRGDRHXXXXXXXXX 442
GYGFV FE A A+ ++NG L ++V V + R+ G+
Sbjct: 186 GYGFVHFETEHSAQTAIEKVNGMLLSDKKVYV--GKFQPRAQRMKELGESGLKYT----- 238
Query: 443 XXXXXPPTRTEYRLIVENLSSRISWQDLKDYMRQAGEVTYA----DAHKQHRNEGVVEFA 610
+ V+N + + L + GE+T A DA + + G V FA
Sbjct: 239 ------------NVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQGKPKGFGFVAFA 286
Query: 611 THSDMRAAIEKLDGTELNGRRVRL 682
A+EKL+ + L G +L
Sbjct: 287 DQDAAGQAVEKLNDSILEGTDCKL 310
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 31.5 bits (68), Expect = 0.58
Identities = 36/144 (25%), Positives = 56/144 (38%), Gaps = 4/144 (2%)
Frame = +2
Query: 263 GYGFVEFEDYRDADDAVYELNGKELLGERVVVEPARGIDRSADRYRRGDRHXXXXXXXXX 442
GYGFV FE A A+ ++NG L ++V V + R+ G+
Sbjct: 186 GYGFVHFETEHSAQTAIEKVNGMLLSDKKVYV--GKFQPRAQRMKELGESGLKYT----- 238
Query: 443 XXXXXPPTRTEYRLIVENLSSRISWQDLKDYMRQAGEVTYA----DAHKQHRNEGVVEFA 610
+ V+N + + L + GE+T A DA + + G V FA
Sbjct: 239 ------------NVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQGKPKGFGFVAFA 286
Query: 611 THSDMRAAIEKLDGTELNGRRVRL 682
A+EKL+ + L G +L
Sbjct: 287 DQDAAGQAVEKLNDSILEGTDCKL 310
>Z81084-7|CAB03111.1| 312|Caenorhabditis elegans Hypothetical
protein F46A9.6 protein.
Length = 312
Score = 31.1 bits (67), Expect = 0.77
Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 9/63 (14%)
Frame = +2
Query: 167 VYVGGLPFGVRERDLEKFFKGF----GRIRDILIKNG-----YGFVEFEDYRDADDAVYE 319
++V GLP + R+L F+G G + + KNG GFV F +DA DA
Sbjct: 33 LFVSGLPMDAKPRELYLLFRGCRGYEGALLKMTSKNGKPTSPVGFVTFLSQQDAQDARKM 92
Query: 320 LNG 328
L G
Sbjct: 93 LQG 95
>Z81037-10|CAB02754.1| 312|Caenorhabditis elegans Hypothetical
protein F46A9.6 protein.
Length = 312
Score = 31.1 bits (67), Expect = 0.77
Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 9/63 (14%)
Frame = +2
Query: 167 VYVGGLPFGVRERDLEKFFKGF----GRIRDILIKNG-----YGFVEFEDYRDADDAVYE 319
++V GLP + R+L F+G G + + KNG GFV F +DA DA
Sbjct: 33 LFVSGLPMDAKPRELYLLFRGCRGYEGALLKMTSKNGKPTSPVGFVTFLSQQDAQDARKM 92
Query: 320 LNG 328
L G
Sbjct: 93 LQG 95
>Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical
protein R74.5b protein.
Length = 286
Score = 31.1 bits (67), Expect = 0.77
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +2
Query: 263 GYGFVEFEDYRDADDAVYELNGKELLGERVVVEPA 367
G+GFV ++ DAD A E NG + G RV V A
Sbjct: 22 GFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLA 56
>X95609-1|CAA64867.1| 312|Caenorhabditis elegans mec-8 protein.
Length = 312
Score = 31.1 bits (67), Expect = 0.77
Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 9/63 (14%)
Frame = +2
Query: 167 VYVGGLPFGVRERDLEKFFKGF----GRIRDILIKNG-----YGFVEFEDYRDADDAVYE 319
++V GLP + R+L F+G G + + KNG GFV F +DA DA
Sbjct: 33 LFVSGLPMDAKPRELYLLFRGCRGYEGALLKMTSKNGKPTSPVGFVTFLSQQDAQDARKM 92
Query: 320 LNG 328
L G
Sbjct: 93 LQG 95
>X95608-1|CAA64866.1| 312|Caenorhabditis elegans mec-8 protein.
Length = 312
Score = 31.1 bits (67), Expect = 0.77
Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 9/63 (14%)
Frame = +2
Query: 167 VYVGGLPFGVRERDLEKFFKGF----GRIRDILIKNG-----YGFVEFEDYRDADDAVYE 319
++V GLP + R+L F+G G + + KNG GFV F +DA DA
Sbjct: 33 LFVSGLPMDAKPRELYLLFRGCRGYEGALLKMTSKNGKPTSPVGFVTFLSQQDAQDARKM 92
Query: 320 LNG 328
L G
Sbjct: 93 LQG 95
>AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical
protein F29C4.7b protein.
Length = 423
Score = 31.1 bits (67), Expect = 0.77
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 6/57 (10%)
Frame = +2
Query: 167 VYVGGLPFGVRERDLEKFFKGFGRIRDILIKN------GYGFVEFEDYRDADDAVYE 319
++VG +P V+ER++ F+ G++ ++ IK Y FV F+ A A E
Sbjct: 171 LFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINTDAAYAFVMFQTVDQAIQAKAE 227
>AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical
protein F29C4.7a protein.
Length = 520
Score = 31.1 bits (67), Expect = 0.77
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 6/57 (10%)
Frame = +2
Query: 167 VYVGGLPFGVRERDLEKFFKGFGRIRDILIKN------GYGFVEFEDYRDADDAVYE 319
++VG +P V+ER++ F+ G++ ++ IK Y FV F+ A A E
Sbjct: 171 LFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINTDAAYAFVMFQTVDQAIQAKAE 227
>AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical
protein F29C4.7c protein.
Length = 497
Score = 31.1 bits (67), Expect = 0.77
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 6/57 (10%)
Frame = +2
Query: 167 VYVGGLPFGVRERDLEKFFKGFGRIRDILIKN------GYGFVEFEDYRDADDAVYE 319
++VG +P V+ER++ F+ G++ ++ IK Y FV F+ A A E
Sbjct: 148 LFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINTDAAYAFVMFQTVDQAIQAKAE 204
>Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical
protein T12D8.2 protein.
Length = 207
Score = 30.7 bits (66), Expect = 1.0
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +2
Query: 200 ERDLEKFFKGFGRIRDILIKNGYGFVEFEDYRDADDAVYELNGKELLGERVV-VEPARGI 376
+ +L+KF RD G+ +V FE+ + + A+ LNG + G RV+ V A+
Sbjct: 33 DEELKKFDIHLVHDRDSGSFKGFAYVTFENEQQMNTAISGLNGAD-FGNRVLKVNRAQQR 91
Query: 377 DRSADRYRRGDR 412
DRS RG R
Sbjct: 92 DRSDRGGGRGGR 103
>U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical
protein EEED8.4 protein.
Length = 191
Score = 30.7 bits (66), Expect = 1.0
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 8/76 (10%)
Frame = +2
Query: 167 VYVGGLPFGVRERDLEKFFKGFGRI------RDILIK--NGYGFVEFEDYRDADDAVYEL 322
V++G + F ++E+ FKG G+I +D K + ++EF+D ++A+ +
Sbjct: 57 VFIGNVDFNSTIEEIEEHFKGCGQIVKTTIPKDKFTKKQKNFAYIEFDDSSSIENALV-M 115
Query: 323 NGKELLGERVVVEPAR 370
NG +VV R
Sbjct: 116 NGSLFRSRPIVVTAKR 131
>AL033514-34|CAA22113.1| 463|Caenorhabditis elegans Hypothetical
protein Y75B8A.35b protein.
Length = 463
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +2
Query: 257 KNGYGFVEFEDYRDADDAVYELNGKELLGERVVV 358
+NGYGFV+F+ + Y N E L +R+ +
Sbjct: 129 ENGYGFVDFQPFAQQQQPAYNGNEPEFLIQRMQI 162
>AL033514-33|CAB54500.1| 480|Caenorhabditis elegans Hypothetical
protein Y75B8A.35a protein.
Length = 480
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +2
Query: 257 KNGYGFVEFEDYRDADDAVYELNGKELLGERVVV 358
+NGYGFV+F+ + Y N E L +R+ +
Sbjct: 146 ENGYGFVDFQPFAQQQQPAYNGNEPEFLIQRMQI 179
>AF160493-1|AAD43348.1| 465|Caenorhabditis elegans DNA-binding
protein ZIP-1 protein.
Length = 465
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +2
Query: 257 KNGYGFVEFEDYRDADDAVYELNGKELLGERVVV 358
+NGYGFV+F+ + Y N E L +R+ +
Sbjct: 146 ENGYGFVDFQPFAQQQQPAYNGNEPEFLIQRMQI 179
>AF160492-1|AAD43347.1| 463|Caenorhabditis elegans DNA-binding
protein ZIP-1 protein.
Length = 463
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +2
Query: 257 KNGYGFVEFEDYRDADDAVYELNGKELLGERVVV 358
+NGYGFV+F+ + Y N E L +R+ +
Sbjct: 129 ENGYGFVDFQPFAQQQQPAYNGNEPEFLIQRMQI 162
>AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily
assigned gene nameprotein 262 protein.
Length = 302
Score = 30.3 bits (65), Expect = 1.3
Identities = 23/90 (25%), Positives = 38/90 (42%), Gaps = 8/90 (8%)
Frame = +2
Query: 146 WKMVGSRVYVGGLPFGVRERDLEKFFKGFGRIRDILI--------KNGYGFVEFEDYRDA 301
W RV+ G L V + L K F+ + + + GYGFV F D D
Sbjct: 198 WDENDFRVFCGDLGNEVSDELLAKAFRKYPSFQKAKVVRESRTNKSKGYGFVSFRDSEDY 257
Query: 302 DDAVYELNGKELLGERVVVEPARGIDRSAD 391
A+ E++GK + + + + +R+ D
Sbjct: 258 VRAMREMDGKYVGNRPIKLRKSAWKERNID 287
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/36 (33%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Frame = +2
Query: 164 RVYVGGLPFGVRERDLEKFFKGFGRIRDI-LIKNGY 268
+++VG +P + E+DL F+ FG+I + ++K+ Y
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKY 65
>U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical
protein EEED8.12 protein.
Length = 197
Score = 29.9 bits (64), Expect = 1.8
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 8/76 (10%)
Frame = +2
Query: 167 VYVGGLPFGVRERDLEKFFKGFGRI------RDILIK--NGYGFVEFEDYRDADDAVYEL 322
V++G + F ++E+ FKG G I +D K + ++EF+D ++A+ +
Sbjct: 63 VFIGNVDFNSTIEEVEEHFKGCGHIVRTTIPKDKFTKKQKNFAYIEFDDSSSIENALV-M 121
Query: 323 NGKELLGERVVVEPAR 370
NG +VV R
Sbjct: 122 NGSLFRSRPIVVTAKR 137
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/36 (33%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Frame = +2
Query: 164 RVYVGGLPFGVRERDLEKFFKGFGRIRDI-LIKNGY 268
+++VG +P + E+DL F+ FG+I + ++K+ Y
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKY 65
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 29.5 bits (63), Expect = 2.4
Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 8/75 (10%)
Frame = +2
Query: 164 RVYVGGLPFGVRERDLEKFFKGFGRIRDILIK--------NGYGFVEFEDYRDADDAVYE 319
R+++ LP+ +E DL+ FK +G + ++ + G+ VEF A A
Sbjct: 280 RLFLRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKKTGACKGFAIVEFVFPEAAVAAYSA 339
Query: 320 LNGKELLGERVVVEP 364
L+G G + + P
Sbjct: 340 LDGYVFKGRMMHILP 354
>Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical
protein T04A8.6 protein.
Length = 307
Score = 29.5 bits (63), Expect = 2.4
Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Frame = +2
Query: 167 VYVGGLPFGVRERDLEKFFKGFGRIRDILI--------KNGYGFVEFEDYRDADDAVYEL 322
V + +PFG E++L +F+ FG + I + G+ +V F++ A+ A +
Sbjct: 34 VKIKRIPFGFFEKELLGYFRQFGNVLRIRVARNRRTGNHKGWAYVGFDNKAVAEIAAESM 93
Query: 323 NGKELLGERV 352
NG + +R+
Sbjct: 94 NGYLMFEQRL 103
>U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform b protein.
Length = 420
Score = 29.5 bits (63), Expect = 2.4
Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 8/76 (10%)
Frame = +2
Query: 158 GSRVYVGGLPFGVRERDLEKFFKGFGRIRDILI--------KNGYGFVEFEDYRDADDAV 313
G+ +++ LP + DL F FG I + +GFV +E+ + A +A+
Sbjct: 334 GANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAI 393
Query: 314 YELNGKELLGERVVVE 361
+NG ++ +R+ V+
Sbjct: 394 SAMNGFQIGSKRLKVQ 409
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 29.5 bits (63), Expect = 2.4
Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 8/76 (10%)
Frame = +2
Query: 158 GSRVYVGGLPFGVRERDLEKFFKGFGRIRDILI--------KNGYGFVEFEDYRDADDAV 313
G+ +++ LP + DL F FG I + +GFV +E+ + A +A+
Sbjct: 498 GANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAI 557
Query: 314 YELNGKELLGERVVVE 361
+NG ++ +R+ V+
Sbjct: 558 SAMNGFQIGSKRLKVQ 573
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 29.5 bits (63), Expect = 2.4
Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 8/76 (10%)
Frame = +2
Query: 158 GSRVYVGGLPFGVRERDLEKFFKGFGRIRDILI--------KNGYGFVEFEDYRDADDAV 313
G+ +++ LP + DL F FG I + +GFV +E+ + A +A+
Sbjct: 498 GANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAI 557
Query: 314 YELNGKELLGERVVVE 361
+NG ++ +R+ V+
Sbjct: 558 SAMNGFQIGSKRLKVQ 573
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 29.5 bits (63), Expect = 2.4
Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 8/76 (10%)
Frame = +2
Query: 158 GSRVYVGGLPFGVRERDLEKFFKGFGRIRDILI--------KNGYGFVEFEDYRDADDAV 313
G+ +++ LP + DL F FG I + +GFV +E+ + A +A+
Sbjct: 427 GANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAI 486
Query: 314 YELNGKELLGERVVVE 361
+NG ++ +R+ V+
Sbjct: 487 SAMNGFQIGSKRLKVQ 502
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 29.5 bits (63), Expect = 2.4
Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 8/76 (10%)
Frame = +2
Query: 158 GSRVYVGGLPFGVRERDLEKFFKGFGRIRDILI--------KNGYGFVEFEDYRDADDAV 313
G+ +++ LP + DL F FG I + +GFV +E+ + A +A+
Sbjct: 498 GANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAI 557
Query: 314 YELNGKELLGERVVVE 361
+NG ++ +R+ V+
Sbjct: 558 SAMNGFQIGSKRLKVQ 573
>AF099918-1|AAK29840.2| 820|Caenorhabditis elegans Hypothetical
protein H05C05.1a protein.
Length = 820
Score = 29.5 bits (63), Expect = 2.4
Identities = 19/74 (25%), Positives = 35/74 (47%)
Frame = +2
Query: 461 PTRTEYRLIVENLSSRISWQDLKDYMRQAGEVTYADAHKQHRNEGVVEFATHSDMRAAIE 640
PT +R+ + N+SS+ ++L Y + D K+ N E+ T + A++
Sbjct: 74 PTEPPFRVQITNISSQHVEEELIYYFGGESHIKRVDIRKEDGN-AEFEYFTRDGLLLALK 132
Query: 641 KLDGTELNGRRVRL 682
K D E GR +++
Sbjct: 133 KQD-VEFKGRVLKV 145
>Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical
protein C50B8.1 protein.
Length = 114
Score = 28.7 bits (61), Expect = 4.1
Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 8/80 (10%)
Frame = +2
Query: 149 KMVGSRVYVGGLPFGVRERDLEKFFKGFGRIR--------DILIKNGYGFVEFEDYRDAD 304
K G VY+ + + + LE +FK +G I+ D + G+ + F D +D
Sbjct: 21 KNTGQTVYLTHVKWVTGKSQLEHYFKRYGSIQSVNMFYDPDTGLHRGFASITF-DSKDGA 79
Query: 305 DAVYELNGKELLGERVVVEP 364
+ E + G+RV VEP
Sbjct: 80 NKAIEQRPHVIDGDRVDVEP 99
>Z50176-3|CAA90540.1| 196|Caenorhabditis elegans Hypothetical
protein C09G1.3 protein.
Length = 196
Score = 28.7 bits (61), Expect = 4.1
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = -2
Query: 319 LVHSIICISV-IFKFNKTISILDKYVSDSSKTFEELFQVSLSYSKGETTN 173
L +++C +F+F + I ILD+Y+ SK L VS +GE +N
Sbjct: 81 LPRNVVCSGAELFQFAEKIRILDEYL--KSKDLTLLQDVSKQIKRGENSN 128
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 28.3 bits (60), Expect = 5.4
Identities = 16/70 (22%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Frame = +2
Query: 200 ERDLEKFFKGFGRIRDILI----KNG----YGFVEFEDYRDADDAVYELNGKELLGERVV 355
+ DLE F FG+I + I ++G Y F+EF++ + + A ++++ + R+
Sbjct: 254 DEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKMDNVLIDDRRIH 313
Query: 356 VEPARGIDRS 385
V+ ++ + ++
Sbjct: 314 VDFSQSVSQN 323
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 28.3 bits (60), Expect = 5.4
Identities = 16/70 (22%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Frame = +2
Query: 200 ERDLEKFFKGFGRIRDILI----KNG----YGFVEFEDYRDADDAVYELNGKELLGERVV 355
+ DLE F FG+I + I ++G Y F+EF++ + + A ++++ + R+
Sbjct: 254 DEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKMDNVLIDDRRIH 313
Query: 356 VEPARGIDRS 385
V+ ++ + ++
Sbjct: 314 VDFSQSVSQN 323
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 28.3 bits (60), Expect = 5.4
Identities = 16/70 (22%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Frame = +2
Query: 200 ERDLEKFFKGFGRIRDILI----KNG----YGFVEFEDYRDADDAVYELNGKELLGERVV 355
+ DLE F FG+I + I ++G Y F+EF++ + + A ++++ + R+
Sbjct: 185 DEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKMDNVLIDDRRIH 244
Query: 356 VEPARGIDRS 385
V+ ++ + ++
Sbjct: 245 VDFSQSVSQN 254
>AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 27.9 bits (59), Expect = 7.2
Identities = 10/31 (32%), Positives = 20/31 (64%)
Frame = +2
Query: 149 KMVGSRVYVGGLPFGVRERDLEKFFKGFGRI 241
++V ++V+VGG+ + + + KFF FG +
Sbjct: 201 RVVSNKVFVGGISHMMNRKIINKFFGQFGTV 231
>AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 27.9 bits (59), Expect = 7.2
Identities = 10/31 (32%), Positives = 20/31 (64%)
Frame = +2
Query: 149 KMVGSRVYVGGLPFGVRERDLEKFFKGFGRI 241
++V ++V+VGG+ + + + KFF FG +
Sbjct: 201 RVVSNKVFVGGISHMMNRKIINKFFGQFGTV 231
>AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization of
germline protein1, isoform b protein.
Length = 619
Score = 27.9 bits (59), Expect = 7.2
Identities = 10/31 (32%), Positives = 20/31 (64%)
Frame = +2
Query: 149 KMVGSRVYVGGLPFGVRERDLEKFFKGFGRI 241
++V ++V+VGG+ + + + KFF FG +
Sbjct: 201 RVVSNKVFVGGISHMMNRKIINKFFGQFGTV 231
>Z66512-2|CAA91323.1| 387|Caenorhabditis elegans Hypothetical
protein F52H3.3 protein.
Length = 387
Score = 27.5 bits (58), Expect = 9.5
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +2
Query: 260 NGYGFVEFEDYRDADDAVYELNGKELLGERVVVEPARGIDRSADRYRRG 406
N +GF F + D +++ Y N + RVVV+ G+ R+ +Y G
Sbjct: 174 NNWGFPSFMAWEDVNNSNYVRNEMVTVTARVVVQKVLGV-RNVPKYDFG 221
>Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical
protein C40H1.1 protein.
Length = 559
Score = 27.5 bits (58), Expect = 9.5
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +2
Query: 164 RVYVGGLPFGVRERDLEKFFKGFGRI 241
+V++GGLP V E + F FG++
Sbjct: 246 KVFIGGLPIDVSEEQVWATFGAFGKV 271
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 27.5 bits (58), Expect = 9.5
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 8/60 (13%)
Frame = +2
Query: 164 RVYVGGLPFGVRERDLEKFFKGFGRIRD---ILIK-----NGYGFVEFEDYRDADDAVYE 319
R+YV G+ E L ++F +G + IL K G+GFV F+D+ D V +
Sbjct: 77 RLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQ 136
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 27.5 bits (58), Expect = 9.5
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 8/60 (13%)
Frame = +2
Query: 164 RVYVGGLPFGVRERDLEKFFKGFGRIRD---ILIK-----NGYGFVEFEDYRDADDAVYE 319
R+YV G+ E L ++F +G + IL K G+GFV F+D+ D V +
Sbjct: 77 RLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQ 136
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,901,522
Number of Sequences: 27780
Number of extensions: 263847
Number of successful extensions: 1010
Number of sequences better than 10.0: 122
Number of HSP's better than 10.0 without gapping: 879
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 974
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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