Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10a10
         (283 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A6Q2G8 Cluster: Putative uncharacterized protein; n=1; ...    32   2.1  
UniRef50_Q24DS4 Cluster: Cation channel family protein; n=1; Tet...    32   2.1  
UniRef50_Q4Z561 Cluster: Ubiquitin-protein ligase 1, putative; n...    31   6.5  
UniRef50_Q9XYS4 Cluster: Tyrosine kinase receptor HTK32; n=1; Hy...    30   8.6  

>UniRef50_A6Q2G8 Cluster: Putative uncharacterized protein; n=1;
           Nitratiruptor sp. SB155-2|Rep: Putative uncharacterized
           protein - Nitratiruptor sp. (strain SB155-2)
          Length = 350

 Score = 32.3 bits (70), Expect = 2.1
 Identities = 15/57 (26%), Positives = 27/57 (47%)
 Frame = -1

Query: 181 FVTITKFSILQITVIISVQFHKTTNYKRLNPNRFCGIKICQIHLKKNFQCYNTAFLV 11
           FV + K +IL+    + +  H    + R NPN +    +   ++ KNF  Y  A+ +
Sbjct: 120 FVELLKSAILEFRPDVVISMHDGYGFARKNPNHWGQSIVIDENIYKNFHLYEEAYSI 176


>UniRef50_Q24DS4 Cluster: Cation channel family protein; n=1;
           Tetrahymena thermophila SB210|Rep: Cation channel family
           protein - Tetrahymena thermophila SB210
          Length = 2194

 Score = 32.3 bits (70), Expect = 2.1
 Identities = 12/35 (34%), Positives = 25/35 (71%)
 Frame = +2

Query: 26  IVTLKVFFQMNLTNFYPTKTVGIKAFVVSCFMKLH 130
           ++ L++FFQM++TNF P   + + A ++  F++L+
Sbjct: 247 LLNLELFFQMDITNFQPLFQILLIASIIDIFVELN 281


>UniRef50_Q4Z561 Cluster: Ubiquitin-protein ligase 1, putative;
           n=15; Eukaryota|Rep: Ubiquitin-protein ligase 1,
           putative - Plasmodium berghei
          Length = 1458

 Score = 30.7 bits (66), Expect = 6.5
 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = -1

Query: 139 IISVQFHKTTNYKRLNPNRFCGI-KICQIHLKKNFQCYNTAFL 14
           I+++ F K  N K  NPN +        IH+ KN+ C NT F+
Sbjct: 292 ILAIYFKKKKNEK--NPNFYSDFTSYIPIHISKNYTCTNTYFV 332


>UniRef50_Q9XYS4 Cluster: Tyrosine kinase receptor HTK32; n=1; Hydra
           vulgaris|Rep: Tyrosine kinase receptor HTK32 - Hydra
           attenuata (Hydra) (Hydra vulgaris)
          Length = 752

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = +1

Query: 1   FMN*QEKLYCNIESFFSNEFDKFL 72
           FMN +++++ N+ SFF  E D FL
Sbjct: 706 FMNDKDEMHVNLNSFFKKELDNFL 729


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 218,244,542
Number of Sequences: 1657284
Number of extensions: 3177957
Number of successful extensions: 7264
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7142
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7264
length of database: 575,637,011
effective HSP length: 71
effective length of database: 457,969,847
effective search space used: 10075336634
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)