BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc10a10
(283 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY058361-1|AAL13590.1| 302|Drosophila melanogaster GH13023p pro... 26 6.2
AE014297-717|AAN14310.1| 302|Drosophila melanogaster CG7549-PB,... 26 6.2
AE014297-716|AAF54204.1| 520|Drosophila melanogaster CG7549-PA,... 26 6.2
AE014297-715|ABI31146.1| 563|Drosophila melanogaster CG7549-PC,... 26 6.2
M96840-1|AAA28651.1| 1175|Drosophila melanogaster calcium activa... 26 8.2
M69053-1|AAA28902.1| 1184|Drosophila melanogaster calcium-activa... 26 8.2
AE014297-3611|AAS65211.1| 1183|Drosophila melanogaster CG10693-P... 26 8.2
AE014297-3610|AAN14013.1| 1183|Drosophila melanogaster CG10693-P... 26 8.2
AE014297-3609|AAX52990.1| 1164|Drosophila melanogaster CG10693-P... 26 8.2
AE014297-3608|AAX52989.1| 1175|Drosophila melanogaster CG10693-P... 26 8.2
AE014297-3607|AAX52988.1| 1175|Drosophila melanogaster CG10693-P... 26 8.2
AE014297-3606|AAX52987.1| 1175|Drosophila melanogaster CG10693-P... 26 8.2
AE014297-3605|AAX52986.1| 1164|Drosophila melanogaster CG10693-P... 26 8.2
AE014297-3604|AAX52985.1| 1175|Drosophila melanogaster CG10693-P... 26 8.2
AE014297-3603|AAX52984.1| 1180|Drosophila melanogaster CG10693-P... 26 8.2
AE014297-3602|AAX52983.1| 1213|Drosophila melanogaster CG10693-P... 26 8.2
AE014297-3601|AAX52982.1| 1187|Drosophila melanogaster CG10693-P... 26 8.2
AE014297-3600|AAX52981.1| 1164|Drosophila melanogaster CG10693-P... 26 8.2
AE014297-3599|AAX52980.1| 1175|Drosophila melanogaster CG10693-P... 26 8.2
AE014297-3598|AAF56324.1| 1175|Drosophila melanogaster CG10693-P... 26 8.2
AE014297-3597|AAX52979.1| 1197|Drosophila melanogaster CG10693-P... 26 8.2
AE014297-3596|AAX52978.1| 1200|Drosophila melanogaster CG10693-P... 26 8.2
AE014297-3595|AAX52977.1| 1175|Drosophila melanogaster CG10693-P... 26 8.2
>AY058361-1|AAL13590.1| 302|Drosophila melanogaster GH13023p
protein.
Length = 302
Score = 26.2 bits (55), Expect = 6.2
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -3
Query: 86 PFLWDKNLSNSFEKKLSMLQYSFSC 12
P +DKN ++F+ K+ + SFSC
Sbjct: 123 PVGYDKNFDDNFKSKVDLPPTSFSC 147
>AE014297-717|AAN14310.1| 302|Drosophila melanogaster CG7549-PB,
isoform B protein.
Length = 302
Score = 26.2 bits (55), Expect = 6.2
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -3
Query: 86 PFLWDKNLSNSFEKKLSMLQYSFSC 12
P +DKN ++F+ K+ + SFSC
Sbjct: 123 PVGYDKNFDDNFKSKVDLPPTSFSC 147
>AE014297-716|AAF54204.1| 520|Drosophila melanogaster CG7549-PA,
isoform A protein.
Length = 520
Score = 26.2 bits (55), Expect = 6.2
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -3
Query: 86 PFLWDKNLSNSFEKKLSMLQYSFSC 12
P +DKN ++F+ K+ + SFSC
Sbjct: 341 PVGYDKNFDDNFKSKVDLPPTSFSC 365
>AE014297-715|ABI31146.1| 563|Drosophila melanogaster CG7549-PC,
isoform C protein.
Length = 563
Score = 26.2 bits (55), Expect = 6.2
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -3
Query: 86 PFLWDKNLSNSFEKKLSMLQYSFSC 12
P +DKN ++F+ K+ + SFSC
Sbjct: 384 PVGYDKNFDDNFKSKVDLPPTSFSC 408
>M96840-1|AAA28651.1| 1175|Drosophila melanogaster calcium activated
potassium channelprotein.
Length = 1175
Score = 25.8 bits (54), Expect = 8.2
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +1
Query: 202 FFFF*FILATDQLIFLINKYCF 267
+FF FI A+D+L F++ Y F
Sbjct: 178 YFFIRFIAASDKLWFMLEMYSF 199
>M69053-1|AAA28902.1| 1184|Drosophila melanogaster calcium-activated
K+ channel subunitprotein.
Length = 1184
Score = 25.8 bits (54), Expect = 8.2
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +1
Query: 202 FFFF*FILATDQLIFLINKYCF 267
+FF FI A+D+L F++ Y F
Sbjct: 162 YFFIRFIAASDKLWFMLEMYSF 183
>AE014297-3611|AAS65211.1| 1183|Drosophila melanogaster CG10693-PC,
isoform C protein.
Length = 1183
Score = 25.8 bits (54), Expect = 8.2
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +1
Query: 202 FFFF*FILATDQLIFLINKYCF 267
+FF FI A+D+L F++ Y F
Sbjct: 161 YFFIRFIAASDKLWFMLEMYSF 182
>AE014297-3610|AAN14013.1| 1183|Drosophila melanogaster CG10693-PB,
isoform B protein.
Length = 1183
Score = 25.8 bits (54), Expect = 8.2
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +1
Query: 202 FFFF*FILATDQLIFLINKYCF 267
+FF FI A+D+L F++ Y F
Sbjct: 161 YFFIRFIAASDKLWFMLEMYSF 182
>AE014297-3609|AAX52990.1| 1164|Drosophila melanogaster CG10693-PP,
isoform P protein.
Length = 1164
Score = 25.8 bits (54), Expect = 8.2
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +1
Query: 202 FFFF*FILATDQLIFLINKYCF 267
+FF FI A+D+L F++ Y F
Sbjct: 178 YFFIRFIAASDKLWFMLEMYSF 199
>AE014297-3608|AAX52989.1| 1175|Drosophila melanogaster CG10693-PQ,
isoform Q protein.
Length = 1175
Score = 25.8 bits (54), Expect = 8.2
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +1
Query: 202 FFFF*FILATDQLIFLINKYCF 267
+FF FI A+D+L F++ Y F
Sbjct: 178 YFFIRFIAASDKLWFMLEMYSF 199
>AE014297-3607|AAX52988.1| 1175|Drosophila melanogaster CG10693-PE,
isoform E protein.
Length = 1175
Score = 25.8 bits (54), Expect = 8.2
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +1
Query: 202 FFFF*FILATDQLIFLINKYCF 267
+FF FI A+D+L F++ Y F
Sbjct: 178 YFFIRFIAASDKLWFMLEMYSF 199
>AE014297-3606|AAX52987.1| 1175|Drosophila melanogaster CG10693-PD,
isoform D protein.
Length = 1175
Score = 25.8 bits (54), Expect = 8.2
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +1
Query: 202 FFFF*FILATDQLIFLINKYCF 267
+FF FI A+D+L F++ Y F
Sbjct: 178 YFFIRFIAASDKLWFMLEMYSF 199
>AE014297-3605|AAX52986.1| 1164|Drosophila melanogaster CG10693-PO,
isoform O protein.
Length = 1164
Score = 25.8 bits (54), Expect = 8.2
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +1
Query: 202 FFFF*FILATDQLIFLINKYCF 267
+FF FI A+D+L F++ Y F
Sbjct: 178 YFFIRFIAASDKLWFMLEMYSF 199
>AE014297-3604|AAX52985.1| 1175|Drosophila melanogaster CG10693-PH,
isoform H protein.
Length = 1175
Score = 25.8 bits (54), Expect = 8.2
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +1
Query: 202 FFFF*FILATDQLIFLINKYCF 267
+FF FI A+D+L F++ Y F
Sbjct: 178 YFFIRFIAASDKLWFMLEMYSF 199
>AE014297-3603|AAX52984.1| 1180|Drosophila melanogaster CG10693-PJ,
isoform J protein.
Length = 1180
Score = 25.8 bits (54), Expect = 8.2
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +1
Query: 202 FFFF*FILATDQLIFLINKYCF 267
+FF FI A+D+L F++ Y F
Sbjct: 178 YFFIRFIAASDKLWFMLEMYSF 199
>AE014297-3602|AAX52983.1| 1213|Drosophila melanogaster CG10693-PI,
isoform I protein.
Length = 1213
Score = 25.8 bits (54), Expect = 8.2
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +1
Query: 202 FFFF*FILATDQLIFLINKYCF 267
+FF FI A+D+L F++ Y F
Sbjct: 178 YFFIRFIAASDKLWFMLEMYSF 199
>AE014297-3601|AAX52982.1| 1187|Drosophila melanogaster CG10693-PL,
isoform L protein.
Length = 1187
Score = 25.8 bits (54), Expect = 8.2
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +1
Query: 202 FFFF*FILATDQLIFLINKYCF 267
+FF FI A+D+L F++ Y F
Sbjct: 178 YFFIRFIAASDKLWFMLEMYSF 199
>AE014297-3600|AAX52981.1| 1164|Drosophila melanogaster CG10693-PK,
isoform K protein.
Length = 1164
Score = 25.8 bits (54), Expect = 8.2
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +1
Query: 202 FFFF*FILATDQLIFLINKYCF 267
+FF FI A+D+L F++ Y F
Sbjct: 178 YFFIRFIAASDKLWFMLEMYSF 199
>AE014297-3599|AAX52980.1| 1175|Drosophila melanogaster CG10693-PG,
isoform G protein.
Length = 1175
Score = 25.8 bits (54), Expect = 8.2
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +1
Query: 202 FFFF*FILATDQLIFLINKYCF 267
+FF FI A+D+L F++ Y F
Sbjct: 178 YFFIRFIAASDKLWFMLEMYSF 199
>AE014297-3598|AAF56324.1| 1175|Drosophila melanogaster CG10693-PA,
isoform A protein.
Length = 1175
Score = 25.8 bits (54), Expect = 8.2
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +1
Query: 202 FFFF*FILATDQLIFLINKYCF 267
+FF FI A+D+L F++ Y F
Sbjct: 178 YFFIRFIAASDKLWFMLEMYSF 199
>AE014297-3597|AAX52979.1| 1197|Drosophila melanogaster CG10693-PM,
isoform M protein.
Length = 1197
Score = 25.8 bits (54), Expect = 8.2
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +1
Query: 202 FFFF*FILATDQLIFLINKYCF 267
+FF FI A+D+L F++ Y F
Sbjct: 178 YFFIRFIAASDKLWFMLEMYSF 199
>AE014297-3596|AAX52978.1| 1200|Drosophila melanogaster CG10693-PN,
isoform N protein.
Length = 1200
Score = 25.8 bits (54), Expect = 8.2
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +1
Query: 202 FFFF*FILATDQLIFLINKYCF 267
+FF FI A+D+L F++ Y F
Sbjct: 178 YFFIRFIAASDKLWFMLEMYSF 199
>AE014297-3595|AAX52977.1| 1175|Drosophila melanogaster CG10693-PF,
isoform F protein.
Length = 1175
Score = 25.8 bits (54), Expect = 8.2
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +1
Query: 202 FFFF*FILATDQLIFLINKYCF 267
+FF FI A+D+L F++ Y F
Sbjct: 178 YFFIRFIAASDKLWFMLEMYSF 199
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,606,744
Number of Sequences: 53049
Number of extensions: 141296
Number of successful extensions: 232
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 232
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 232
length of database: 24,988,368
effective HSP length: 72
effective length of database: 21,168,840
effective search space used: 444545640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -