Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10a10
         (283 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U53344-3|AAA96224.1|  702|Caenorhabditis elegans Hypothetical pr...    27   2.1  
U28735-4|AAF99953.1|  488|Caenorhabditis elegans Hypothetical pr...    26   3.6  
Z81546-1|CAB04449.2|  859|Caenorhabditis elegans Hypothetical pr...    26   4.8  
AL023835-12|CAA19484.1|  412|Caenorhabditis elegans Hypothetical...    25   6.3  
AF036702-9|AAR85906.1|  111|Caenorhabditis elegans Hypothetical ...    25   6.3  
Z70209-1|CAA94146.1|  183|Caenorhabditis elegans Hypothetical pr...    25   8.4  
U58735-2|AAC48147.3|  443|Caenorhabditis elegans Hypothetical pr...    25   8.4  
AF364401-1|AAK73018.1|  443|Caenorhabditis elegans ceramide gluc...    25   8.4  

>U53344-3|AAA96224.1|  702|Caenorhabditis elegans Hypothetical
           protein T07H6.4 protein.
          Length = 702

 Score = 27.1 bits (57), Expect = 2.1
 Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 6/68 (8%)
 Frame = -1

Query: 211 KKKNICVHHAFVTITKFSILQITVIISVQFHKTTNYKRLNPN------RFCGIKICQIHL 50
           KKK  C     +   K +I   TVI   Q  +T  + +   +      R   I + Q+H 
Sbjct: 298 KKKLNCSKTETICTLKMNINSHTVIYHTQKKETVVFNQNFESGSKLLFRCANIGLEQLHG 357

Query: 49  KKNFQCYN 26
           KK  QCYN
Sbjct: 358 KKELQCYN 365


>U28735-4|AAF99953.1|  488|Caenorhabditis elegans Hypothetical
          protein F48E3.2 protein.
          Length = 488

 Score = 26.2 bits (55), Expect = 3.6
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +2

Query: 20 SCIVTLKVFFQMNLTNFYPTKTVG 91
          S ++ +   FQM  TN YP   +G
Sbjct: 12 SAVLAITAIFQMGYTNAYPNTAIG 35


>Z81546-1|CAB04449.2|  859|Caenorhabditis elegans Hypothetical
           protein F53A2.1 protein.
          Length = 859

 Score = 25.8 bits (54), Expect = 4.8
 Identities = 12/34 (35%), Positives = 23/34 (67%)
 Frame = -1

Query: 253 LLKISIDL*QV*IKKKKNICVHHAFVTITKFSIL 152
           L ++ ID  ++  +KKK+I +HH +++ T  SI+
Sbjct: 7   LPRMKIDKKKMEKRKKKHIHLHHIYISTTFSSII 40


>AL023835-12|CAA19484.1|  412|Caenorhabditis elegans Hypothetical
           protein Y37A1B.13 protein.
          Length = 412

 Score = 25.4 bits (53), Expect = 6.3
 Identities = 16/39 (41%), Positives = 20/39 (51%)
 Frame = +3

Query: 135 IITVICNIENLVIVTNA*WTQMFFFFLIYTCYRSIDIFN 251
           II VI  +  LV+  ++    MF   L YTC    DIFN
Sbjct: 83  IIFVII-LNQLVVDVHSLSMPMFLKCLFYTCCGETDIFN 120


>AF036702-9|AAR85906.1|  111|Caenorhabditis elegans Hypothetical
          protein F33D4.7 protein.
          Length = 111

 Score = 25.4 bits (53), Expect = 6.3
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -1

Query: 49 KKNFQCYNTAFLVNS 5
          KKN +CYNTA + N+
Sbjct: 10 KKNDECYNTAAITNN 24


>Z70209-1|CAA94146.1|  183|Caenorhabditis elegans Hypothetical
           protein K02D3.1 protein.
          Length = 183

 Score = 25.0 bits (52), Expect = 8.4
 Identities = 8/15 (53%), Positives = 13/15 (86%)
 Frame = +1

Query: 220 ILATDQLIFLINKYC 264
           I++ DQ+IFL+N+ C
Sbjct: 23  IISDDQIIFLVNRIC 37


>U58735-2|AAC48147.3|  443|Caenorhabditis elegans Hypothetical
           protein F20B4.6 protein.
          Length = 443

 Score = 25.0 bits (52), Expect = 8.4
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = +1

Query: 22  LYCNIESFFSNEFDKF 69
           LY N+E+FF+ ++ KF
Sbjct: 113 LYTNLETFFTTQYHKF 128


>AF364401-1|AAK73018.1|  443|Caenorhabditis elegans ceramide
           glucosyltransferase protein.
          Length = 443

 Score = 25.0 bits (52), Expect = 8.4
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = +1

Query: 22  LYCNIESFFSNEFDKF 69
           LY N+E+FF+ ++ KF
Sbjct: 113 LYTNLETFFTTQYHKF 128


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,589,847
Number of Sequences: 27780
Number of extensions: 89559
Number of successful extensions: 256
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 253
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 256
length of database: 12,740,198
effective HSP length: 69
effective length of database: 10,823,378
effective search space used: 259761072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)