Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10a10
         (283 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    21   2.2  
DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein ...    21   2.9  
AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein ...    21   2.9  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    21   3.8  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    19   8.8  
AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter...    19   8.8  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    19   8.8  

>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 21.4 bits (43), Expect = 2.2
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = +2

Query: 173 CNECVMDTNVFFFFNL 220
           C   VMD N   FFNL
Sbjct: 317 CTASVMDENGLQFFNL 332


>DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein 1
           protein.
          Length = 116

 Score = 21.0 bits (42), Expect = 2.9
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = +2

Query: 8   INKKSCIVTLKVFFQMNLTNFYPTK 82
           I+  SC+    VFF+ ++T  + T+
Sbjct: 50  IDAGSCLTPDSVFFKSHITEAFQTQ 74


>AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein
           protein.
          Length = 116

 Score = 21.0 bits (42), Expect = 2.9
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = +2

Query: 8   INKKSCIVTLKVFFQMNLTNFYPTK 82
           I+  SC+    VFF+ ++T  + T+
Sbjct: 50  IDAGSCLTPDSVFFKSHITEAFQTQ 74


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 20.6 bits (41), Expect = 3.8
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = -3

Query: 86  PFLWDKNLSNSFEK 45
           PF WD +++  F K
Sbjct: 415 PFQWDNSINAGFSK 428


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 19.4 bits (38), Expect = 8.8
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -3

Query: 98  P*SQPFLWDKNLSNSF 51
           P   PF WD ++S  F
Sbjct: 415 PARTPFQWDDSVSAGF 430


>AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter
           Am-EAAT protein.
          Length = 543

 Score = 19.4 bits (38), Expect = 8.8
 Identities = 7/29 (24%), Positives = 15/29 (51%)
 Frame = -1

Query: 205 KNICVHHAFVTITKFSILQITVIISVQFH 119
           K + +++   T     +  +TVI+ + FH
Sbjct: 298 KIMSINNLTATAQMLGLYMVTVILGLLFH 326


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 19.4 bits (38), Expect = 8.8
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -3

Query: 98  P*SQPFLWDKNLSNSF 51
           P   PF WD ++S  F
Sbjct: 415 PARTPFQWDDSVSAGF 430


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,917
Number of Sequences: 438
Number of extensions: 873
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  5494764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)