Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt9p23
         (666 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein pro...    23   2.0  
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    22   6.0  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    22   6.0  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    22   6.0  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    22   6.0  
AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced prot...    22   6.0  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    22   6.0  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              22   6.0  

>L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein
           protein.
          Length = 74

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +2

Query: 197 CPECHKPIKNESLLRLYLNV 256
           CPECHK    +  L+ ++ +
Sbjct: 12  CPECHKRFTRDHHLKTHMRL 31


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +2

Query: 104 TTKQNEIIVTTTCG 145
           TT  NEI+  T CG
Sbjct: 418 TTGPNEIVTCTNCG 431


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +2

Query: 104 TTKQNEIIVTTTCG 145
           TT  NEI+  T CG
Sbjct: 404 TTGPNEIVTCTNCG 417


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +2

Query: 104 TTKQNEIIVTTTCG 145
           TT  NEI+  T CG
Sbjct: 438 TTGPNEIVTCTNCG 451


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +2

Query: 104 TTKQNEIIVTTTCG 145
           TT  NEI+  T CG
Sbjct: 387 TTGPNEIVTCTNCG 400


>AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 87

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = +3

Query: 552 YRPCSPNMEG*IVQMNK 602
           YRPC+ N +  I+++N+
Sbjct: 52  YRPCTKNQQCSILRINR 68


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = +3

Query: 552 YRPCSPNMEG*IVQMNK 602
           YRPC+ N +  I+++N+
Sbjct: 101 YRPCTKNQQCSILRINR 117


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +2

Query: 137 TCGHIFHDDCIQESLKSSHTCPE 205
           TC  + + D +Q  + + HT PE
Sbjct: 381 TCHAVRNQDVVQTHVLTIHTIPE 403


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,875
Number of Sequences: 438
Number of extensions: 3027
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20099475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)