Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt9p06
(449 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-tr... 211 4e-56
SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans i... 199 2e-52
SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-tr... 164 5e-42
SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans... 164 5e-42
SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans... 141 5e-35
SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid... 110 1e-25
SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-tran... 100 2e-22
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 87 9e-19
SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating tra... 58 5e-10
SPCC285.13c |||nucleoporin Nup60 |Schizosaccharomyces pombe|chr ... 28 0.76
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 27 1.0
SPBP8B7.07c |set6||histone lysine methyltransferase Set6 |Schizo... 27 1.3
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 27 1.8
SPAP7G5.06 |||amino acid permease, unknown 4|Schizosaccharomyces... 26 3.1
SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting pro... 26 3.1
SPCC320.03 |||transcription factor |Schizosaccharomyces pombe|ch... 25 5.4
SPAC23D3.13c |||guanyl-nucleotide exchange factor|Schizosaccharo... 25 5.4
SPCC1450.07c |||D-amino acid oxidase |Schizosaccharomyces pombe|... 25 7.1
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 25 7.1
SPAC869.01 |||amidase |Schizosaccharomyces pombe|chr 1|||Manual 25 7.1
SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster ... 25 7.1
>SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 162
Score = 211 bits (515), Expect = 4e-56
Identities = 96/131 (73%), Positives = 104/131 (79%)
Frame = +2
Query: 56 FFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGD 235
FFDV + PLG+IV +L DV PKT NFRALCTGEKG+GY GS FHRVIP FMLQGGD
Sbjct: 5 FFDVIANGQPLGRIVFKLFDDVVPKTAANFRALCTGEKGYGYAGSTFHRVIPQFMLQGGD 64
Query: 236 FTNHNGTGGKSIYGNKFEDXNFTLKHTGPGVLSMAXAGADTNGSQFFITTVKTSWLDGRH 415
FT NGTGGKSIYG KF D NF LKH PG+LSMA AG +TNGSQFFITTV T WLDG+H
Sbjct: 65 FTRGNGTGGKSIYGEKFPDENFALKHNKPGLLSMANAGPNTNGSQFFITTVVTPWLDGKH 124
Query: 416 VVFGNVVEGME 448
VVFG V EGM+
Sbjct: 125 VVFGEVTEGMD 135
>SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 201
Score = 199 bits (485), Expect = 2e-52
Identities = 92/142 (64%), Positives = 105/142 (73%)
Frame = +2
Query: 23 ANTGKMSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHR 202
AN G V+FD+ D LG++ I L PKT ENFRAL TGEKGFGY+GSIFHR
Sbjct: 19 ANRGPKVTDTVYFDLQQGDEFLGRVTIGLFGKTVPKTAENFRALATGEKGFGYEGSIFHR 78
Query: 203 VIPNFMLQGGDFTNHNGTGGKSIYGNKFEDXNFTLKHTGPGVLSMAXAGADTNGSQFFIT 382
VIPNFM+QGGD T +GTGGKSIYG++F D NF L H PG+LSMA AG D+NGSQFFIT
Sbjct: 79 VIPNFMIQGGDITKGDGTGGKSIYGSRFPDENFKLSHQRPGLLSMANAGPDSNGSQFFIT 138
Query: 383 TVKTSWLDGRHVVFGNVVEGME 448
TVKT WLDG HVVFG V+ G +
Sbjct: 139 TVKTPWLDGHHVVFGEVLSGYD 160
>SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-trans
isomerase Wis2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 356
Score = 164 bits (399), Expect = 5e-42
Identities = 81/133 (60%), Positives = 95/133 (71%), Gaps = 4/133 (3%)
Frame = +2
Query: 56 FFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG----YKGSIFHRVIPNFML 223
+F +++D I EL +V PKT +NF +LC G + G YKGS FHRVI NFML
Sbjct: 6 YFKISIDGKIQPTIYFELFDNVVPKTVKNFASLCNGFEKDGRCLTYKGSRFHRVIKNFML 65
Query: 224 QGGDFTNHNGTGGKSIYGNKFEDXNFTLKHTGPGVLSMAXAGADTNGSQFFITTVKTSWL 403
QGGDFT NGTGG+SIYG KFED NF LKH P +LSMA AG +TNGSQFFITTV T L
Sbjct: 66 QGGDFTRGNGTGGESIYGEKFEDENFELKHDKPFLLSMANAGPNTNGSQFFITTVPTPHL 125
Query: 404 DGRHVVFGNVVEG 442
DG+HVVFG V++G
Sbjct: 126 DGKHVVFGKVIQG 138
>SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp3 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 173
Score = 164 bits (399), Expect = 5e-42
Identities = 79/141 (56%), Positives = 97/141 (68%), Gaps = 7/141 (4%)
Frame = +2
Query: 47 PRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGE------KGFGYKGSIFHRVI 208
P VF D+ +D LG+I I L S + PKT ENFR CTGE K GYK S FHR+I
Sbjct: 5 PVVFMDIAIDGRLLGRIKIRLFSSIVPKTAENFRQFCTGETLGVNQKPIGYKNSTFHRII 64
Query: 209 PNFMLQGGDFTNHNGTGGKSIYGNK-FEDXNFTLKHTGPGVLSMAXAGADTNGSQFFITT 385
FM+QGGDF + +GTG +I+ ++ F D NFTLKH PG+LSMA AG D+NG QFFITT
Sbjct: 65 QGFMIQGGDFVSGDGTGSATIFNSRTFPDENFTLKHDRPGLLSMANAGKDSNGCQFFITT 124
Query: 386 VKTSWLDGRHVVFGNVVEGME 448
V +LDG+HVVFG V+EG +
Sbjct: 125 VPCDFLDGKHVVFGEVIEGYD 145
>SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 141 bits (341), Expect = 5e-35
Identities = 70/121 (57%), Positives = 88/121 (72%), Gaps = 1/121 (0%)
Frame = +2
Query: 86 LGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGK 265
LGKI+IEL ++ PKTC+NF L ++G+ Y G IFHRVIP+F++QGGD T G GG
Sbjct: 10 LGKILIELYTEHAPKTCQNFYTLA--KEGY-YDGVIFHRVIPDFVIQGGDPTG-TGRGGT 65
Query: 266 SIYGNKFEDX-NFTLKHTGPGVLSMAXAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEG 442
SIYG+KF+D + L HTG G+LSMA AG +TN SQFFIT T WLDG+H +FG VV G
Sbjct: 66 SIYGDKFDDEIHSDLHHTGAGILSMANAGPNTNSSQFFITLAPTPWLDGKHTIFGRVVSG 125
Query: 443 M 445
+
Sbjct: 126 L 126
>SPCC553.04 |cyp9||WD repeat containing cyclophilin family
peptidyl-prolyl cis-trans isomerase
Cyp9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 610
Score = 110 bits (264), Expect = 1e-25
Identities = 58/121 (47%), Positives = 76/121 (62%), Gaps = 1/121 (0%)
Frame = +2
Query: 89 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKS 268
G I I+L + PK +NF E G+ Y +IFHR+I NFM+QGGD +GTGG+S
Sbjct: 464 GDISIKLYPEEAPKAVQNFTT--HAENGY-YDNTIFHRIIKNFMIQGGDPLG-DGTGGES 519
Query: 269 IYGNKFEDX-NFTLKHTGPGVLSMAXAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGM 445
I+ FED + LKH P +SMA +G +TNGSQFFITT T WLDG+H +F G+
Sbjct: 520 IWKKDFEDEISPNLKHDRPFTVSMANSGPNTNGSQFFITTDLTPWLDGKHTIFARAYAGL 579
Query: 446 E 448
+
Sbjct: 580 D 580
>SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 516
Score = 99.5 bits (237), Expect = 2e-22
Identities = 55/120 (45%), Positives = 73/120 (60%), Gaps = 1/120 (0%)
Frame = +2
Query: 89 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKS 268
G+I IEL +D P NF L ++G+ Y+ +IFHR I FM+QGGD + G GG+S
Sbjct: 285 GEINIELHTDYAPHAVYNFVQLA--KQGY-YRNTIFHRNIARFMIQGGD-PSGTGRGGQS 340
Query: 269 IYGNKFEDXNFT-LKHTGPGVLSMAXAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGM 445
I+G F+D LKH G++SMA G +TNGSQFFI LD +H +FG VV G+
Sbjct: 341 IWGKPFKDEFCNPLKHDDRGIISMANRGKNTNGSQFFILYGPAKHLDNKHTIFGRVVGGL 400
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 87.4 bits (207), Expect = 9e-19
Identities = 51/117 (43%), Positives = 67/117 (57%), Gaps = 1/117 (0%)
Frame = +2
Query: 89 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKS 268
G I IEL PK C NF LC +G+ Y G+I HRV+P F++QGGD T G GG+S
Sbjct: 22 GDIQIELWCKEVPKACRNFIQLCL--EGY-YDGTIVHRVVPEFLIQGGDPTG-TGMGGES 77
Query: 269 IYGNKFE-DXNFTLKHTGPGVLSMAXAGADTNGSQFFITTVKTSWLDGRHVVFGNVV 436
IYG F + + L+ G++ MA + N SQFFIT T +G+ +FG VV
Sbjct: 78 IYGEPFAVETHPRLRFIRRGLVGMACTENEGNNSQFFITLGPTPEWNGKQTLFGRVV 134
>SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating
transcription Rct1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 58.4 bits (135), Expect = 5e-10
Identities = 45/139 (32%), Positives = 67/139 (48%), Gaps = 15/139 (10%)
Frame = +2
Query: 77 DAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGT 256
+ +G +VI+L PKTCENF LC K Y F+ + N+ Q GD G
Sbjct: 6 ETTVGDLVIDLFVKEAPKTCENFLKLC---KLKYYNFCPFYNIQHNYTCQTGDPLGPTGD 62
Query: 257 GGKSIY-----GNKF--EDXNFTLKHTGPGVLSMAXAGADTN-------GSQFFIT-TVK 391
GG+ ++ G +F + N +L H G++SM+ A + GSQF IT +
Sbjct: 63 GGRCVWNVLNKGTRFFKAEFNPSLVHNKMGLVSMSTATISSRDDKLLVCGSQFIITLSDN 122
Query: 392 TSWLDGRHVVFGNVVEGME 448
LD R+ ++G V EG +
Sbjct: 123 LEGLDERYPIYGQVAEGFD 141
>SPCC285.13c |||nucleoporin Nup60 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 736
Score = 27.9 bits (59), Expect = 0.76
Identities = 19/51 (37%), Positives = 29/51 (56%)
Frame = +3
Query: 180 TRAPFSIVSSPISCCKEGTSPTITALGESPSTAISLKTRISPLSTLDLASS 332
+RA S++S I KE +P+ITA SP +A S + ISP + + +S
Sbjct: 321 SRAAASLLS--ILDSKEKNTPSITAKAGSPQSAPSKASYISPYARPGITTS 369
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 27.5 bits (58), Expect = 1.0
Identities = 25/86 (29%), Positives = 39/86 (45%)
Frame = +3
Query: 57 SSTSLLTMPHWEKLLLS*EVTSLPRRVKTSVPCALARKASVTRAPFSIVSSPISCCKEGT 236
+STS ++P S + S P TS C + S+ S +S+PI+ T
Sbjct: 198 TSTSSTSIPIPPTSTSSTDTNSSPLPT-TSTSCTTS--TSIPTGGSSSLSTPITPTVPPT 254
Query: 237 SPTITALGESPSTAISLKTRISPLST 314
S + T++ P++ S T SPL T
Sbjct: 255 STSSTSIPIPPTSTSSTDTNSSPLPT 280
Score = 26.6 bits (56), Expect = 1.8
Identities = 25/86 (29%), Positives = 38/86 (44%)
Frame = +3
Query: 57 SSTSLLTMPHWEKLLLS*EVTSLPRRVKTSVPCALARKASVTRAPFSIVSSPISCCKEGT 236
+STS ++P S + S P TS C + T S+ S+PI+ T
Sbjct: 141 TSTSSTSIPIPPTSTSSTDTNSNPLPT-TSTSCTTSTSIPPTGGSSSL-STPITPTVPPT 198
Query: 237 SPTITALGESPSTAISLKTRISPLST 314
S + T++ P++ S T SPL T
Sbjct: 199 STSSTSIPIPPTSTSSTDTNSSPLPT 224
Score = 25.0 bits (52), Expect = 5.4
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = +3
Query: 141 TSVPCALARKASVTRAPFSIVSSPISCCKEGTSPTITALGESPSTAISLKTRISPLST 314
TS C + T S+ S+PI+ TS + T++ P++ S T +PL T
Sbjct: 111 TSTSCTTSTSIPPTGGSSSL-STPITPTVPPTSTSSTSIPIPPTSTSSTDTNSNPLPT 167
>SPBP8B7.07c |set6||histone lysine methyltransferase Set6
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 483
Score = 27.1 bits (57), Expect = 1.3
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +2
Query: 65 VTVDDAPLGKIVIELRSDVTPKTCENFRALCT 160
V D+ P+GKI+I R D+ N C+
Sbjct: 19 VATDNIPIGKIIIRKRVDILSLDSANLTRTCS 50
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 26.6 bits (56), Expect = 1.8
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +1
Query: 361 WFPVLHHHC 387
WFP +HHHC
Sbjct: 97 WFPEVHHHC 105
>SPAP7G5.06 |||amino acid permease, unknown 4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 583
Score = 25.8 bits (54), Expect = 3.1
Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = +2
Query: 233 DFTNHNGTGGKSIYGNKFEDXN-FTLKHTGPGVLSMAXAGADTNGSQFFI 379
D + T KS+YG +D N F + T V+ ADT Q F+
Sbjct: 11 DLEKYPSTATKSVYGQSKDDKNVFDIHPTESEVIPGEVEYADTPSHQNFL 60
>SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting protein
3 homolog Bud6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1385
Score = 25.8 bits (54), Expect = 3.1
Identities = 15/64 (23%), Positives = 30/64 (46%)
Frame = -2
Query: 241 GEVPSLQHEIGDDTMENGALVTEAFLASAQGTEVFTRLGSDVTSQLNNNFSQWGIVNSDV 62
GEV ++QH +T+++ T S+ TE+ RL + + ++ N +
Sbjct: 878 GEVSAIQHSSAQNTLDDHVNTTTHESPSSAFTEILERLKA-IEQNISTNHTNDSAALKSS 936
Query: 61 EEYS 50
E++S
Sbjct: 937 EDHS 940
>SPCC320.03 |||transcription factor |Schizosaccharomyces pombe|chr
3|||Manual
Length = 867
Score = 25.0 bits (52), Expect = 5.4
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 9/54 (16%)
Frame = -3
Query: 186 PL*PKPFSPVH---RAR-----KFSHVL-GVTSLLSSITIFPSGASSTVTSKNT 52
P PKP +PV+ R + S+VL +TS SS+T PS + +T+ S T
Sbjct: 312 PSPPKPNNPVYLPPRGNPTVNDRVSNVLPSITSFDSSVTTVPSNSPATLNSYTT 365
>SPAC23D3.13c |||guanyl-nucleotide exchange factor|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1616
Score = 25.0 bits (52), Expect = 5.4
Identities = 10/22 (45%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Frame = +2
Query: 92 KIVIELRSDVTPKTC-ENFRAL 154
++++ L SD+ PK C NF+AL
Sbjct: 1135 QLMLRLHSDIYPKICISNFKAL 1156
>SPCC1450.07c |||D-amino acid oxidase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 348
Score = 24.6 bits (51), Expect = 7.1
Identities = 7/21 (33%), Positives = 14/21 (66%)
Frame = +3
Query: 27 IPAKCLYHEYSSTSLLTMPHW 89
+P +C+Y ++T L+ PH+
Sbjct: 128 LPGECIYGHKATTFLINAPHY 148
>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 536
Score = 24.6 bits (51), Expect = 7.1
Identities = 22/71 (30%), Positives = 34/71 (47%)
Frame = +3
Query: 117 TSLPRRVKTSVPCALARKASVTRAPFSIVSSPISCCKEGTSPTITALGESPSTAISLKTR 296
TSL +S+P + + A+ T S+ SS + S + + L S +TAIS +
Sbjct: 12 TSLSSSASSSIPASSSSAAAST----SLSSSSVI-----PSSSSSMLSSSSATAISSSSS 62
Query: 297 ISPLSTLDLAS 329
SPLS+ S
Sbjct: 63 SSPLSSSSFTS 73
>SPAC869.01 |||amidase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 583
Score = 24.6 bits (51), Expect = 7.1
Identities = 8/33 (24%), Positives = 19/33 (57%)
Frame = +2
Query: 347 GADTNGSQFFITTVKTSWLDGRHVVFGNVVEGM 445
G TNG F + + ++W + + + +G+ +E +
Sbjct: 531 GVKTNGRPFGLGIMHSAWQEPQLIKYGSAIEDL 563
>SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster
type |Schizosaccharomyces pombe|chr 2|||Manual
Length = 827
Score = 24.6 bits (51), Expect = 7.1
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = -2
Query: 172 AFLASAQGTEVFTRLGSDVTSQLNNNFSQ 86
A+ ++ GTE DVT QL NNFSQ
Sbjct: 607 AYDMNSSGTENLDAT-PDVTGQLPNNFSQ 634
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,058,683
Number of Sequences: 5004
Number of extensions: 43847
Number of successful extensions: 191
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 172
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 178
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 166231220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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