Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt9o01
(903 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0669 + 21695391-21697443,21698319-21699030,21699169-21699775 37 0.019
12_02_0674 - 21745321-21746223,21746229-21747608 34 0.13
05_07_0041 + 27261968-27262145,27262160-27262717,27262814-27263589 34 0.13
07_03_1696 - 28779455-28779733,28779813-28780074,28780805-287809... 33 0.31
10_08_1049 - 22555738-22555744,22556157-22556286,22556613-225567... 31 0.95
02_04_0185 - 20748206-20748405,20749067-20749232,20749373-207494... 31 0.95
01_05_0086 - 18009957-18010107,18010428-18010557,18010700-180108... 31 1.7
05_01_0013 - 85732-86829 30 2.2
09_04_0038 - 13996505-13996836,13997047-13997077,13997307-139974... 30 2.9
03_05_0520 + 25139314-25139364,25139580-25139711,25141594-251417... 30 2.9
01_06_1450 + 37448664-37448936,37449643-37449885 29 3.8
06_01_0805 + 6043248-6043551,6043654-6043755,6044858-6044964,604... 29 5.1
10_06_0169 + 11420115-11420163,11420922-11421041,11421938-114220... 29 6.7
07_03_1573 + 27829967-27830338,27830821-27831510,27831594-278317... 29 6.7
03_05_0954 - 29113938-29114024,29114277-29114444,29115156-291152... 29 6.7
01_06_1464 + 37537218-37537387,37537738-37537897,37539521-375397... 29 6.7
12_02_0385 + 18424617-18425594,18426811-18426850,18427581-184276... 28 8.8
08_01_0079 - 554936-554977,555108-555297,555384-555430,556039-55... 28 8.8
>12_02_0669 + 21695391-21697443,21698319-21699030,21699169-21699775
Length = 1123
Score = 37.1 bits (82), Expect = 0.019
Identities = 30/116 (25%), Positives = 51/116 (43%), Gaps = 4/116 (3%)
Frame = +1
Query: 418 GPVVDLITDAAISTTAVVAKDASPSEGSEYVSADTSSSSAIVTIRSDEPTVDGKLINEEP 597
G + D++I+ A+ + SE ++ +++ V I D+ TVDGKL+ EP
Sbjct: 412 GNAESVAIDSSITEVKETDSIAAVEKDSEISKTESVETASSVVISEDDSTVDGKLV--EP 469
Query: 598 KGTINDEVTPAVNEVSSGPSTI----VAAPAVVVNDVIESPTGVSATEVINDEVSV 753
+++ T + S G T A+ V V ES S+ E D+ +V
Sbjct: 470 TASVSATETEIKEDSSEGSVTTEPTEAASTEFVTAVVEESAPTASSVETSEDDSTV 525
Score = 29.5 bits (63), Expect = 3.8
Identities = 24/102 (23%), Positives = 49/102 (48%), Gaps = 3/102 (2%)
Frame = +1
Query: 454 STTAVVAKDASPSEGSEYVSA---DTSSSSAIVTIRSDEPTVDGKLINEEPKGTINDEVT 624
S+ V + + + +E+V+A +++ +++ V D+ TVD KL+ EP +++ T
Sbjct: 484 SSEGSVTTEPTEAASTEFVTAVVEESAPTASSVETSEDDSTVDDKLV--EPTASVS--AT 539
Query: 625 PAVNEVSSGPSTIVAAPAVVVNDVIESPTGVSATEVINDEVS 750
A ++ S ++ + +V +P A EV E S
Sbjct: 540 EAESKEDSSEGSVASTESVTAVVEESAPVSSVAIEVPAPEAS 581
>12_02_0674 - 21745321-21746223,21746229-21747608
Length = 760
Score = 34.3 bits (75), Expect = 0.13
Identities = 28/120 (23%), Positives = 54/120 (45%), Gaps = 5/120 (4%)
Frame = -2
Query: 605 VPLGSSLISLPSTVGSSDRIVTIADEDEVSAETYSLPS---EGEASFATTAVVEIAAS-V 438
VPL SS +P+T G+S+ ++ A E+ + T +P+ GE S T+ + A++
Sbjct: 459 VPLSSSTSEIPTTTGTSE--LSTASTGELPSPTVKIPTTACTGELSTPTSQIPSTASTRE 516
Query: 437 IKSTTGPLLDISTVAP-ATLVDELVSVSTVAVLPSAVTETSAATDLTFLEGVTSSFQRLT 261
+ + TG + P +T ++ S ++L S+ ++ + L T T
Sbjct: 517 LSTATGKIPSTPRTNPLSTATSKIPSTPRTSLLSSSTSKIPSTPSTCELSTATGKIPSTT 576
>05_07_0041 + 27261968-27262145,27262160-27262717,27262814-27263589
Length = 503
Score = 34.3 bits (75), Expect = 0.13
Identities = 41/144 (28%), Positives = 64/144 (44%), Gaps = 6/144 (4%)
Frame = -2
Query: 734 ITSVALTPVGDSITSFTTTAGA-ATIVLGPLETSFTAGVTSSLMVPLGSSLISLPSTVG- 561
+ + A + + T FT A A L S TA + ++ + SS +L +T G
Sbjct: 63 VPAAAAPRLATAATCFTAPARLLAAATTAALIASTTACLLAATTGVIASSTRTLATTTGV 122
Query: 560 --SSDRIVTIADEDEVSAE-TYSLPSEGEASFATTAVVEIAASVIKSTTGPLL-DISTVA 393
SS R + A V+A T ++ S +T A+V SVI STTG L ++ A
Sbjct: 123 IASSTRTIAAATGSHVAAAITAAIAS------STCALVTATTSVITSTTGALFATAASGA 176
Query: 392 PATLVDELVSVSTVAVLPSAVTET 321
A+ L++ +T +PS T
Sbjct: 177 IASSTGALLAATTSGGIPSTTGST 200
>07_03_1696 - 28779455-28779733,28779813-28780074,28780805-28780956,
28781765-28781961,28782258-28782462,28782737-28782982,
28783603-28783719,28784206-28784397,28784480-28784693,
28784835-28784926,28784952-28785001,28785494-28785812,
28785908-28786068,28786407-28786650,28787212-28787467,
28787634-28787834,28788568-28788910,28789003-28789064,
28789645-28789851,28790170-28790978
Length = 1535
Score = 33.1 bits (72), Expect = 0.31
Identities = 21/112 (18%), Positives = 49/112 (43%), Gaps = 1/112 (0%)
Frame = +1
Query: 454 STTAVVAKDASPSEGSEYVSADTSSSSAIVTIRSDEPTVDGKLI-NEEPKGTINDEVTPA 630
S +V ++ ++ S S S++ IR + G ++ N++P G + + +
Sbjct: 1132 SAVNIVTREELIPYNVQFTSEKFLSLSSLARIRGQLRYLKGLVLSNKKPLGKHGESLPES 1191
Query: 631 VNEVSSGPSTIVAAPAVVVNDVIESPTGVSATEVINDEVSVGFQNYCCSTCC 786
N V+ +T + A +D+I P + ++ + ++ ++ C CC
Sbjct: 1192 GNSVAI--ATSIPATGQTASDIINEPCPICQEKIFDQKMVFQCGHFVCCKCC 1241
>10_08_1049 -
22555738-22555744,22556157-22556286,22556613-22556790,
22556990-22557099,22557234-22557349,22557707-22557968,
22558097-22558406,22558450-22558500,22558545-22558628
Length = 415
Score = 31.5 bits (68), Expect = 0.95
Identities = 28/117 (23%), Positives = 50/117 (42%)
Frame = -2
Query: 599 LGSSLISLPSTVGSSDRIVTIADEDEVSAETYSLPSEGEASFATTAVVEIAASVIKSTTG 420
LG L PS G+ D ++ +S ++ + EI S+ ++T
Sbjct: 274 LGDYLTESPSNPGAGDILMGFLGSVIIS---FAFSMFNQRKLVRRHAAEIFTSIAVASTF 330
Query: 419 PLLDISTVAPATLVDELVSVSTVAVLPSAVTETSAATDLTFLEGVTSSFQRLTVLVS 249
L ST +V EL + T+++LP +T A ++ EGV +S V+++
Sbjct: 331 SLY--STAILGRVV-ELEPILTISILPRCITVALALRVVSLFEGVNTSVTAAVVVLT 384
>02_04_0185 -
20748206-20748405,20749067-20749232,20749373-20749471,
20749487-20749561,20749663-20749743,20750121-20750274,
20750330-20750425,20750518-20750727,20750746-20750957
Length = 430
Score = 31.5 bits (68), Expect = 0.95
Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 4/86 (4%)
Frame = +1
Query: 415 KGPVVDLITDAAISTTAVVAKDASPSEGSEYVSADTSSSSAIVTIRSDEPTVDGKLINEE 594
K V + A+ + A + + V+ SS A+ T +S +P+ DG+ IN+E
Sbjct: 307 KNEVNSYTSAKALQKVKRLPASALKKDNAPDVAMKESSDGALET-QSTKPSSDGQQINKE 365
Query: 595 PKGTIND----EVTPAVNEVSSGPST 660
P + D +V P ++E + P +
Sbjct: 366 PPSVVEDNKQEDVEPMLSECNPEPQS 391
>01_05_0086 -
18009957-18010107,18010428-18010557,18010700-18010877,
18011032-18011141,18011217-18011332,18011449-18011710,
18012345-18012660,18012685-18012927
Length = 501
Score = 30.7 bits (66), Expect = 1.7
Identities = 28/117 (23%), Positives = 51/117 (43%)
Frame = -2
Query: 599 LGSSLISLPSTVGSSDRIVTIADEDEVSAETYSLPSEGEASFATTAVVEIAASVIKSTTG 420
LG L PS G+ D ++ +S ++ + EI S+ ++T
Sbjct: 312 LGDYLTKAPSNPGAGDVLMGFLGSVIIS---FAFSMFKQRKLVKRHAAEIFTSIAIASTF 368
Query: 419 PLLDISTVAPATLVDELVSVSTVAVLPSAVTETSAATDLTFLEGVTSSFQRLTVLVS 249
L ST ++ S+ T+++LP +T A + ++F EGV SS V+++
Sbjct: 369 SLY--STAILGRVIGLEPSL-TISILPRCITVALALSIVSFFEGVNSSLTAAVVVLT 422
>05_01_0013 - 85732-86829
Length = 365
Score = 30.3 bits (65), Expect = 2.2
Identities = 13/35 (37%), Positives = 24/35 (68%)
Frame = +1
Query: 433 LITDAAISTTAVVAKDASPSEGSEYVSADTSSSSA 537
+++ +++ + DA+P+EG YVSA +SSSS+
Sbjct: 158 VVSSSSLHFLSRAPADAAPNEGRMYVSASSSSSSS 192
>09_04_0038 -
13996505-13996836,13997047-13997077,13997307-13997420,
13997546-13997686,13997787-13997851,13997943-13998039,
13998096-13998257,13998360-13998473,14001263-14001311,
14001967-14002047,14003504-14003561,14003671-14004031,
14004129-14004213,14004320-14004591,14004712-14004914,
14005419-14005494
Length = 746
Score = 29.9 bits (64), Expect = 2.9
Identities = 31/114 (27%), Positives = 51/114 (44%), Gaps = 1/114 (0%)
Frame = -2
Query: 629 AGVTSSLMVPLGSSLISLPSTVGSSDRIVTIADEDEVSAETYSLPSEGEASFATTAVVEI 450
A VT + P ++ P V S + I+ V ++ SLP +S +
Sbjct: 244 AKVTVPEVSPTKPMMLQKPQLVSSP--VPAISKPISVVSQATSLPRSASSS-------NV 294
Query: 449 AASVIKSTTGPLLDISTVAPATLVDELVSVSTVA-VLPSAVTETSAATDLTFLE 291
++V KS+ GPL+ T P E ++ +T A ++P AV + A+ FLE
Sbjct: 295 DSNVTKSS-GPLVVPPTSLPPPAQPETLATTTAAAIMPRAVPQARKASLARFLE 347
>03_05_0520 +
25139314-25139364,25139580-25139711,25141594-25141731,
25143191-25143241,25143662-25143751,25143854-25144000,
25144108-25144218,25144307-25144375,25144777-25145517,
25145840-25146004,25146376-25146442,25146580-25146704,
25148714-25148983,25149065-25149199,25149316-25149497,
25149669-25149744
Length = 849
Score = 29.9 bits (64), Expect = 2.9
Identities = 20/54 (37%), Positives = 32/54 (59%)
Frame = -2
Query: 461 VVEIAASVIKSTTGPLLDISTVAPATLVDELVSVSTVAVLPSAVTETSAATDLT 300
V E+ +++ L D+ ++AP++LV + SVST AVL T++S AT T
Sbjct: 212 VEELYSTLPMEKVEALEDMVSLAPSSLVKGVASVSTTAVLS---TKSSVATSPT 262
>01_06_1450 + 37448664-37448936,37449643-37449885
Length = 171
Score = 29.5 bits (63), Expect = 3.8
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = +1
Query: 568 VDGKLINEEPKGTINDEVTPAVNEVSSGPSTIVAAPAVVVNDVIESPTGVSATEVI 735
V+ L EP+ + + V E ++G IV A VV + +P+G +ATE I
Sbjct: 13 VERLLHPREPRDGVREPPRERVGEPTAGGGAIVDLRASVVVIAVSTPSGPTATEGI 68
>06_01_0805 +
6043248-6043551,6043654-6043755,6044858-6044964,
6045687-6045824,6046340-6046651
Length = 320
Score = 29.1 bits (62), Expect = 5.1
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Frame = +1
Query: 454 STTAVVAKDASPSEGSEYVSADTSSSSAIVTIRSDEPTVD--GKLINEEPKGTINDEVTP 627
S T V A A +E S+YVS +SSS+ + + + T+ GK + E K +
Sbjct: 73 SPTYVAAATAEAAESSQYVSRGPASSSSKGAVEAMKETLSRWGKSVGETTK-MVESLSRD 131
Query: 628 AVNEVSSGPSTIVAA 672
+GPS AA
Sbjct: 132 TWQHFKTGPSFTEAA 146
>10_06_0169 +
11420115-11420163,11420922-11421041,11421938-11422053,
11422125-11422213,11422413-11422455,11423296-11423440,
11423581-11423688,11423767-11424086,11424255-11424671,
11424776-11425470,11425564-11426107,11426338-11426682,
11426799-11426909
Length = 1033
Score = 28.7 bits (61), Expect = 6.7
Identities = 33/136 (24%), Positives = 56/136 (41%), Gaps = 1/136 (0%)
Frame = -2
Query: 764 FWXPTDTSSLITSVALTPVGDSITSFTTTAGAATIVLGPLETSFTAGVTSSLMVPLGSSL 585
FW + S L ++A ++S T A + + S A + + S+L
Sbjct: 328 FWQFSSNSYLTEAIAF-----QLSSATADISATENSVQQNDGSLGAAIGFPFLKTQSSNL 382
Query: 584 IS-LPSTVGSSDRIVTIADEDEVSAETYSLPSEGEASFATTAVVEIAASVIKSTTGPLLD 408
L + SD ++ + E + S A + T E A S+I++++ LD
Sbjct: 383 SDILKDSFKKSDSFTRWMSKELLDVEDSQIQSSSGAYWNT----EEADSIIEASSREPLD 438
Query: 407 ISTVAPATLVDELVSV 360
TVAP L D+L S+
Sbjct: 439 QFTVAPMVLQDQLFSI 454
>07_03_1573 +
27829967-27830338,27830821-27831510,27831594-27831781,
27832286-27832318,27832364-27832605,27833178-27833320,
27833649-27833825,27834104-27834256,27834639-27834694,
27834998-27835157,27835301-27835348
Length = 753
Score = 28.7 bits (61), Expect = 6.7
Identities = 23/100 (23%), Positives = 39/100 (39%)
Frame = +1
Query: 448 AISTTAVVAKDASPSEGSEYVSADTSSSSAIVTIRSDEPTVDGKLINEEPKGTINDEVTP 627
+I+ AV S + ++ D + S+ T+ P L N P T N V+P
Sbjct: 170 SITQGAVYPAKLSDGQNKIIITKDIACSNKKETVAPTLPNGKPVLFNGSP--TANANVSP 227
Query: 628 AVNEVSSGPSTIVAAPAVVVNDVIESPTGVSATEVINDEV 747
+ + + A V + SP +S EV +D +
Sbjct: 228 NNGVIENNQKAVAAVLTSVPAKNVSSPAPLSVPEVDHDGI 267
>03_05_0954 -
29113938-29114024,29114277-29114444,29115156-29115212,
29115314-29115369,29115463-29115572,29116142-29116310,
29116418-29116742,29117378-29117442,29117541-29117712,
29118191-29118484
Length = 500
Score = 28.7 bits (61), Expect = 6.7
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = +1
Query: 412 SKGPVVDLITDAAISTTAVVAKDASPSEGSEYVSADTSSSSAIVT 546
+K P + A + TT K A P EG V + SS A+ T
Sbjct: 241 AKAPPPPALPSAPLFTTEKSPKSAQPKEGMSAVFQEISSGKAVTT 285
>01_06_1464 +
37537218-37537387,37537738-37537897,37539521-37539787,
37540541-37540646,37541411-37541678,37541915-37542020,
37542891-37542950,37544349-37544445,37544613-37544803,
37545518-37545583,37545879-37545944,37547510-37547583,
37547910-37548000,37548079-37548236,37548424-37548466,
37548621-37548686,37549113-37549190,37549361-37549453
Length = 719
Score = 28.7 bits (61), Expect = 6.7
Identities = 27/89 (30%), Positives = 37/89 (41%), Gaps = 6/89 (6%)
Frame = -2
Query: 761 WXPTDTSSLITSVALTPVGDSITSFTTTAGAATIVLGPLETSFTAGVTSSLMVPLGSSLI 582
W P SS + + V +S S A + + + L TS G + P+G +
Sbjct: 546 WYP---SSFSFAQCMPQVNES-GSMLAIAEGSQLSIWDLRTSNNGGCIHRISGPIGGIIY 601
Query: 581 SL------PSTVGSSDRIVTIADEDEVSA 513
SL P VG +DR VTI D SA
Sbjct: 602 SLCSSPSGPIAVGGTDRTVTIYDPRRWSA 630
>12_02_0385 +
18424617-18425594,18426811-18426850,18427581-18427636,
18428032-18428151
Length = 397
Score = 28.3 bits (60), Expect = 8.8
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +2
Query: 80 QSPNLLKAGLMTSSP*RLTQHHHH 151
+S +LL+ GL TSS +L HHHH
Sbjct: 75 ESASLLRRGLPTSS--KLPHHHHH 96
>08_01_0079 -
554936-554977,555108-555297,555384-555430,556039-556139,
556223-556271,556432-556494,556602-556695,556822-556924,
557719-557791,557872-557984,558068-558149,558386-558913,
559015-559098,560156-560305,561021-561191,561759-561809,
562601-562738,562823-562894,563236-563391,563681-563839,
564080-564180,564577-564829
Length = 939
Score = 28.3 bits (60), Expect = 8.8
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +1
Query: 595 PKGTINDEVTPAVNEVSSGPSTIVAAPAVVVNDVIESPTGVSATEVINDEVSVG 756
P +N EV+ ++ P T+ A +V+ S +G S + +ND V G
Sbjct: 473 PVDYMNMEVSSDEGHIAKSPDTVTAHESVMKEQDTSSISGHSCADNVNDVVDEG 526
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.311 0.126 0.351
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,495,808
Number of Sequences: 37544
Number of extensions: 297008
Number of successful extensions: 934
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 892
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 933
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2553813320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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