Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt9n16
         (714 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT012304-1|AAS77429.1|  243|Drosophila melanogaster LP23088p pro...   153   2e-37
AE014298-1511|AAF47963.1|  243|Drosophila melanogaster CG17333-P...   153   2e-37
BT012455-1|AAS93726.1|  359|Drosophila melanogaster RE57519p pro...    29   8.3  
AF160942-1|AAD46882.1|  327|Drosophila melanogaster BcDNA.LD1994...    29   8.3  
AE014298-1221|AAF46404.2|  343|Drosophila melanogaster CG1795-PA...    29   8.3  

>BT012304-1|AAS77429.1|  243|Drosophila melanogaster LP23088p
           protein.
          Length = 243

 Score =  153 bits (372), Expect = 2e-37
 Identities = 80/196 (40%), Positives = 112/196 (57%), Gaps = 2/196 (1%)
 Frame = +3

Query: 126 EEEIIRKLSTYIQKISNDAILNRNKFVVGLSGGSVVKYLCEGLPQVETDWSKWTLAFCDE 305
           EE++++ L   +Q+ S +A+   +KF VGLSGGS+V+ L + L       +KW   FCDE
Sbjct: 16  EEQLVQALGDLLQRCSQEALAKHDKFSVGLSGGSLVQLLTKALKSCNLKTAKWVFFFCDE 75

Query: 306 RVVPEDSSDSTFGIYKKDLIPKTE-LKESQFITIKQGATAQETAKDYIEKLRKVXXXXXX 482
           R V  D SDST+G Y+ + + +   ++ESQF+           A DY  K++        
Sbjct: 76  RYVRLDDSDSTYGAYRAEWLTQLPCIQESQFVRADTSQPLDACAADYEAKVKS----QVD 131

Query: 483 XXXXXXXXMGPDGHTCSLFPGH-KLLEETEDKVAAITDSPKPPPERITLTYPVINGARNC 659
                   MGPDGHTCSLFP     L+ET+  V  I +SPKPPPERIT T P+IN ARN 
Sbjct: 132 RFDLLLLGMGPDGHTCSLFPEQPATLQETKRLVIPIRNSPKPPPERITFTLPLINKARNV 191

Query: 660 IFAISGAGKSEMAKRI 707
            F ++GA K+ + K +
Sbjct: 192 AFVVTGAAKASVVKSV 207


>AE014298-1511|AAF47963.1|  243|Drosophila melanogaster CG17333-PA
           protein.
          Length = 243

 Score =  153 bits (372), Expect = 2e-37
 Identities = 80/196 (40%), Positives = 112/196 (57%), Gaps = 2/196 (1%)
 Frame = +3

Query: 126 EEEIIRKLSTYIQKISNDAILNRNKFVVGLSGGSVVKYLCEGLPQVETDWSKWTLAFCDE 305
           EE++++ L   +Q+ S +A+   +KF VGLSGGS+V+ L + L       +KW   FCDE
Sbjct: 16  EEQLVQALGDLLQRCSQEALAKHDKFSVGLSGGSLVQLLTKALKSCNLKTAKWVFFFCDE 75

Query: 306 RVVPEDSSDSTFGIYKKDLIPKTE-LKESQFITIKQGATAQETAKDYIEKLRKVXXXXXX 482
           R V  D SDST+G Y+ + + +   ++ESQF+           A DY  K++        
Sbjct: 76  RYVRLDDSDSTYGAYRAEWLTQLPCIQESQFVRADTSQPLDACAADYEAKVKS----QVD 131

Query: 483 XXXXXXXXMGPDGHTCSLFPGH-KLLEETEDKVAAITDSPKPPPERITLTYPVINGARNC 659
                   MGPDGHTCSLFP     L+ET+  V  I +SPKPPPERIT T P+IN ARN 
Sbjct: 132 RFDLLLLGMGPDGHTCSLFPEQPATLQETKRLVIPIRNSPKPPPERITFTLPLINKARNV 191

Query: 660 IFAISGAGKSEMAKRI 707
            F ++GA K+ + K +
Sbjct: 192 AFVVTGAAKASVVKSV 207


>BT012455-1|AAS93726.1|  359|Drosophila melanogaster RE57519p
           protein.
          Length = 359

 Score = 28.7 bits (61), Expect = 8.3
 Identities = 10/35 (28%), Positives = 20/35 (57%)
 Frame = -2

Query: 641 YNWIS*CDSLRWRFWGICYSCYLIFCFFKQFVTWE 537
           + W S CD  R ++ G+ ++ Y +    + F+T+E
Sbjct: 46  FRWRSICDGNRTKYGGVVFNTYWVLQQEESFITYE 80


>AF160942-1|AAD46882.1|  327|Drosophila melanogaster BcDNA.LD19945
           protein.
          Length = 327

 Score = 28.7 bits (61), Expect = 8.3
 Identities = 10/35 (28%), Positives = 20/35 (57%)
 Frame = -2

Query: 641 YNWIS*CDSLRWRFWGICYSCYLIFCFFKQFVTWE 537
           + W S CD  R ++ G+ ++ Y +    + F+T+E
Sbjct: 30  FRWRSICDGNRTKYGGVVFNTYWVLQQEESFITYE 64


>AE014298-1221|AAF46404.2|  343|Drosophila melanogaster CG1795-PA
           protein.
          Length = 343

 Score = 28.7 bits (61), Expect = 8.3
 Identities = 10/35 (28%), Positives = 20/35 (57%)
 Frame = -2

Query: 641 YNWIS*CDSLRWRFWGICYSCYLIFCFFKQFVTWE 537
           + W S CD  R ++ G+ ++ Y +    + F+T+E
Sbjct: 46  FRWRSICDGNRTKYGGVVFNTYWVLQQEESFITYE 80


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,203,911
Number of Sequences: 53049
Number of extensions: 543471
Number of successful extensions: 1716
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1634
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1712
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3170136354
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)