Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt9n14
(675 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ496103-1|ABF47092.1| 459|Homo sapiens heme carrier protein 1 ... 36 0.17
BC010691-1|AAH10691.1| 431|Homo sapiens SLC46A1 protein protein. 36 0.17
AK054669-1|BAB70789.1| 459|Homo sapiens protein ( Homo sapiens ... 36 0.17
BC048285-1|AAH48285.1| 475|Homo sapiens solute carrier family 4... 31 4.9
AL139041-1|CAI95196.1| 475|Homo sapiens thymic stromal co-trans... 31 4.9
AK055571-1|BAB70960.1| 475|Homo sapiens protein ( Homo sapiens ... 31 4.9
AF242557-1|AAK28343.1| 475|Homo sapiens thymic stromal co-trans... 31 4.9
>DQ496103-1|ABF47092.1| 459|Homo sapiens heme carrier protein 1
protein.
Length = 459
Score = 35.5 bits (78), Expect = 0.17
Identities = 26/106 (24%), Positives = 49/106 (46%)
Frame = +3
Query: 240 VGAWSDKYKKRKICIVFPFIGEILSNTGLLFATYYFQELSLTATALIEALPAAFTGSYVI 419
+GAWSD +R + +V +G +L L + + Q ++ + A G +
Sbjct: 104 LGAWSDSVGRRPL-LVLASLGLLLQ---ALVSVFVVQLQLHVGYFVLGRILCALLGDFGG 159
Query: 420 IFMGMYSFMADRTTVESRTFRLGLVTICVTLGTPTGTALSGILLRA 557
+ ++ +AD ++ SRTFR+ L+ + + + L G LRA
Sbjct: 160 LLAASFASVADVSSSRSRTFRMALLEASIGVAGMLASLLGGHWLRA 205
>BC010691-1|AAH10691.1| 431|Homo sapiens SLC46A1 protein protein.
Length = 431
Score = 35.5 bits (78), Expect = 0.17
Identities = 26/106 (24%), Positives = 49/106 (46%)
Frame = +3
Query: 240 VGAWSDKYKKRKICIVFPFIGEILSNTGLLFATYYFQELSLTATALIEALPAAFTGSYVI 419
+GAWSD +R + +V +G +L L + + Q ++ + A G +
Sbjct: 104 LGAWSDSVGRRPL-LVLASLGLLLQ---ALVSVFVVQLQLHVGYFVLGRILCALLGDFGG 159
Query: 420 IFMGMYSFMADRTTVESRTFRLGLVTICVTLGTPTGTALSGILLRA 557
+ ++ +AD ++ SRTFR+ L+ + + + L G LRA
Sbjct: 160 LLAASFASVADVSSSRSRTFRMALLEASIGVAGMLASLLGGHWLRA 205
>AK054669-1|BAB70789.1| 459|Homo sapiens protein ( Homo sapiens
cDNA FLJ30107 fis, clone BNGH41000198, weakly similar to
TETRACYCLINE RESISTANCE PROTEIN, CLASS E. ).
Length = 459
Score = 35.5 bits (78), Expect = 0.17
Identities = 26/106 (24%), Positives = 49/106 (46%)
Frame = +3
Query: 240 VGAWSDKYKKRKICIVFPFIGEILSNTGLLFATYYFQELSLTATALIEALPAAFTGSYVI 419
+GAWSD +R + +V +G +L L + + Q ++ + A G +
Sbjct: 104 LGAWSDSVGRRPL-LVLASLGLLLQ---ALVSVFVVQLQLHVGYFVLGRILCALLGDFGG 159
Query: 420 IFMGMYSFMADRTTVESRTFRLGLVTICVTLGTPTGTALSGILLRA 557
+ ++ +AD ++ SRTFR+ L+ + + + L G LRA
Sbjct: 160 LLAASFASVADVSSSRSRTFRMALLEASIGVAGMLASLLGGHWLRA 205
>BC048285-1|AAH48285.1| 475|Homo sapiens solute carrier family 46,
member 2 protein.
Length = 475
Score = 30.7 bits (66), Expect = 4.9
Identities = 30/112 (26%), Positives = 50/112 (44%)
Frame = +3
Query: 219 PAIMVIFVGAWSDKYKKRKICIVFPFIGEILSNTGLLFATYYFQELSLTATALIEALPAA 398
P + +G SD+Y RKI I +G +LS GLL + + A AL
Sbjct: 89 PLLSAYGLGWLSDRYH-RKISICMSLLGFLLSRLGLLLKVLLDWPVEVLYGA--AALNGL 145
Query: 399 FTGSYVIIFMGMYSFMADRTTVESRTFRLGLVTICVTLGTPTGTALSGILLR 554
F G + + G+ + + ++ R+ RL L+ + + L G+ SG L +
Sbjct: 146 F-GGFSAFWSGVMALGSLGSSEGRRSVRLILIDLMLGLAGFCGSMASGHLFK 196
>AL139041-1|CAI95196.1| 475|Homo sapiens thymic stromal
co-transporter protein.
Length = 475
Score = 30.7 bits (66), Expect = 4.9
Identities = 30/112 (26%), Positives = 50/112 (44%)
Frame = +3
Query: 219 PAIMVIFVGAWSDKYKKRKICIVFPFIGEILSNTGLLFATYYFQELSLTATALIEALPAA 398
P + +G SD+Y RKI I +G +LS GLL + + A AL
Sbjct: 89 PLLSAYGLGWLSDRYH-RKISICMSLLGFLLSRLGLLLKVLLDWPVEVLYGA--AALNGL 145
Query: 399 FTGSYVIIFMGMYSFMADRTTVESRTFRLGLVTICVTLGTPTGTALSGILLR 554
F G + + G+ + + ++ R+ RL L+ + + L G+ SG L +
Sbjct: 146 F-GGFSAFWSGVMALGSLGSSEGRRSVRLILIDLMLGLAGFCGSMASGHLFK 196
>AK055571-1|BAB70960.1| 475|Homo sapiens protein ( Homo sapiens
cDNA FLJ31009 fis, clone HLUNG2000142, moderately
similar to Mus musculus putative thymic stromal
co-transporter TSCOT mRNA. ).
Length = 475
Score = 30.7 bits (66), Expect = 4.9
Identities = 30/112 (26%), Positives = 50/112 (44%)
Frame = +3
Query: 219 PAIMVIFVGAWSDKYKKRKICIVFPFIGEILSNTGLLFATYYFQELSLTATALIEALPAA 398
P + +G SD+Y RKI I +G +LS GLL + + A AL
Sbjct: 89 PLLSAYGLGWLSDRYH-RKISICMSLLGFLLSRLGLLLKVLLDWPVEVLYGA--AALNGL 145
Query: 399 FTGSYVIIFMGMYSFMADRTTVESRTFRLGLVTICVTLGTPTGTALSGILLR 554
F G + + G+ + + ++ R+ RL L+ + + L G+ SG L +
Sbjct: 146 F-GGFSAFWSGVMALGSLGSSEGRRSVRLILIDLMLGLAGFCGSMASGHLFK 196
>AF242557-1|AAK28343.1| 475|Homo sapiens thymic stromal
co-transporter protein.
Length = 475
Score = 30.7 bits (66), Expect = 4.9
Identities = 30/112 (26%), Positives = 50/112 (44%)
Frame = +3
Query: 219 PAIMVIFVGAWSDKYKKRKICIVFPFIGEILSNTGLLFATYYFQELSLTATALIEALPAA 398
P + +G SD+Y RKI I +G +LS GLL + + A AL
Sbjct: 89 PLLSAYGLGWLSDRYH-RKISICMSLLGFLLSRLGLLLKVLLDWPVEVLYGA--AALNGL 145
Query: 399 FTGSYVIIFMGMYSFMADRTTVESRTFRLGLVTICVTLGTPTGTALSGILLR 554
F G + + G+ + + ++ R+ RL L+ + + L G+ SG L +
Sbjct: 146 F-GGFSAFWSGVMALGSLGSSEGRRSVRLILIDLMLGLAGFCGSMASGHLFK 196
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,083,016
Number of Sequences: 237096
Number of extensions: 2038336
Number of successful extensions: 4018
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3927
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4018
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7615267504
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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