Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt9n13
         (726 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC034253-1|AAH34253.1|  414|Homo sapiens chromosome 4 open readi...   143   7e-34
BC128143-1|AAI28144.1|  332|Homo sapiens C4orf29 protein protein.     141   3e-33
BC128142-1|AAI28143.1|  321|Homo sapiens C4orf29 protein protein.     126   8e-29

>BC034253-1|AAH34253.1|  414|Homo sapiens chromosome 4 open reading
           frame 29 protein.
          Length = 414

 Score =  143 bits (346), Expect = 7e-34
 Identities = 63/120 (52%), Positives = 87/120 (72%)
 Frame = +1

Query: 88  MSASKLDAVYRSILLTKFFTKGWGKPENLRRLFEFRKVVSNREECFKLVERDYPVTITKE 267
           M  SKLD +YR +LLTK F +GWG+PE+L+RLFEFRK++ NRE C  LV  DYPV I K 
Sbjct: 1   MGVSKLDILYRRLLLTKLFIRGWGRPEDLKRLFEFRKMIGNRERCQNLVSSDYPVHIDKI 60

Query: 268 QNVAEGKLLEGYFTSPLEKHLPGIVPEIAQKAHFQALLPTKWPDKDCKPVCLHLAGTGDH 447
           +  ++ K+L+G+F SP+  ++P I+P  +  A FQ ++P +W  K  +PVC+HLAGTGDH
Sbjct: 61  EEQSDCKILDGHFVSPMAHYVPDIMPIESVIARFQFIVPKEWNSK-YRPVCIHLAGTGDH 119



 Score =  141 bits (341), Expect = 3e-33
 Identities = 60/87 (68%), Positives = 72/87 (82%)
 Frame = +2

Query: 464 YWRRRNLMVKPLLKEAGIGGIILENPFYGLRKPIDQIRSSLHNVSDIFVMGGCLILESLV 643
           YWRRR LM +P++KEA +  ++LENP+YG RKP DQ+RSSL NVSD+FVMGG L+LES  
Sbjct: 121 YWRRRTLMARPMIKEARMASLLLENPYYGCRKPKDQVRSSLKNVSDLFVMGGALVLESAA 180

Query: 644 LFHWCERNGLGPLGVTGLSMGGHMASL 724
           L HW ER G GPLG+TG+SMGGHMASL
Sbjct: 181 LLHWLEREGYGPLGMTGISMGGHMASL 207


>BC128143-1|AAI28144.1|  332|Homo sapiens C4orf29 protein protein.
          Length = 332

 Score =  141 bits (341), Expect = 3e-33
 Identities = 60/87 (68%), Positives = 72/87 (82%)
 Frame = +2

Query: 464 YWRRRNLMVKPLLKEAGIGGIILENPFYGLRKPIDQIRSSLHNVSDIFVMGGCLILESLV 643
           YWRRR LM +P++KEA +  ++LENP+YG RKP DQ+RSSL NVSD+FVMGG L+LES  
Sbjct: 39  YWRRRTLMARPMIKEARMASLLLENPYYGCRKPKDQVRSSLKNVSDLFVMGGALVLESAA 98

Query: 644 LFHWCERNGLGPLGVTGLSMGGHMASL 724
           L HW ER G GPLG+TG+SMGGHMASL
Sbjct: 99  LLHWLEREGYGPLGMTGISMGGHMASL 125



 Score = 40.7 bits (91), Expect = 0.005
 Identities = 16/27 (59%), Positives = 21/27 (77%)
 Frame = +1

Query: 367 FQALLPTKWPDKDCKPVCLHLAGTGDH 447
           FQ ++P +W  K  +PVC+HLAGTGDH
Sbjct: 12  FQFIVPKEWNSK-YRPVCIHLAGTGDH 37


>BC128142-1|AAI28143.1|  321|Homo sapiens C4orf29 protein protein.
          Length = 321

 Score =  126 bits (304), Expect = 8e-29
 Identities = 54/80 (67%), Positives = 66/80 (82%)
 Frame = +2

Query: 485 MVKPLLKEAGIGGIILENPFYGLRKPIDQIRSSLHNVSDIFVMGGCLILESLVLFHWCER 664
           M +P++KEA +  ++LENP+YG RKP DQ+RSSL NVSD+FVMGG L+LES  L HW ER
Sbjct: 1   MARPMIKEARMASLLLENPYYGCRKPKDQVRSSLKNVSDLFVMGGALVLESAALLHWLER 60

Query: 665 NGLGPLGVTGLSMGGHMASL 724
            G GPLG+TG+SMGGHMASL
Sbjct: 61  EGYGPLGMTGISMGGHMASL 80


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,088,429
Number of Sequences: 237096
Number of extensions: 2480517
Number of successful extensions: 5852
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5516
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5847
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8567175942
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)