Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt9n13
         (726 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75533-6|CAA99819.1|  378|Caenorhabditis elegans Hypothetical pr...   102   2e-22
AF040642-9|AAB94950.1|  589|Caenorhabditis elegans Hypothetical ...    30   1.9  
U61952-2|AAB03160.1|  509|Caenorhabditis elegans Cytochrome p450...    29   3.4  
U41541-1|ABA54425.1|  795|Caenorhabditis elegans Hypothetical pr...    29   3.4  
AF045641-2|AAC02578.2| 1370|Caenorhabditis elegans Hypothetical ...    28   5.9  
Z99278-8|CAE18037.1|  133|Caenorhabditis elegans Hypothetical pr...    28   7.8  

>Z75533-6|CAA99819.1|  378|Caenorhabditis elegans Hypothetical
           protein C54G4.7 protein.
          Length = 378

 Score =  102 bits (245), Expect = 2e-22
 Identities = 48/87 (55%), Positives = 63/87 (72%)
 Frame = +2

Query: 464 YWRRRNLMVKPLLKEAGIGGIILENPFYGLRKPIDQIRSSLHNVSDIFVMGGCLILESLV 643
           Y+RR  L+V  +LK+ G+G I+++NPFYG RKP +Q RSSL NV+D+FVMG  LI E   
Sbjct: 128 YFRRHYLLVDDMLKD-GVGSILIQNPFYGDRKPPNQFRSSLENVTDLFVMGAALIAECNH 186

Query: 644 LFHWCERNGLGPLGVTGLSMGGHMASL 724
           LF+W E  G GP  ++G+SMGG MA L
Sbjct: 187 LFNWSETLGYGPFAISGVSMGGFMAQL 213



 Score = 74.9 bits (176), Expect = 5e-14
 Identities = 44/120 (36%), Positives = 67/120 (55%), Gaps = 2/120 (1%)
 Frame = +1

Query: 94  ASKLDAVYRSIL-LTKFFTKGWGKPENLRRLFEFRKVVSNREECFKLVERDYP-VTITKE 267
           A  +D  +RS L L++ FTK WG P+ ++++ ++R+ V ++      V+   P + I K+
Sbjct: 12  AKHVDLKFRSALVLSQLFTKSWGHPDVIKQMAKYRRDVMSKRLVMDYVKELNPKIDIVKK 71

Query: 268 QNVAEGKLLEGYFTSPLEKHLPGIVPEIAQKAHFQALLPTKWPDKDCKPVCLHLAGTGDH 447
            +       EG+F SP     P  +P    +AHF+A LP K P     PVC+HLAGTGDH
Sbjct: 72  YSKNGVTSYEGFFASPHATLFPNHMPGNVGRAHFRAYLPQK-PG----PVCIHLAGTGDH 126


>AF040642-9|AAB94950.1|  589|Caenorhabditis elegans Hypothetical
           protein C50D2.2 protein.
          Length = 589

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 19/51 (37%), Positives = 28/51 (54%)
 Frame = -2

Query: 401 LSGHFVGSSAWKCAFCAISGTIPGRCFSRGLVKYPSRSLPSATFCSLVMVT 249
           +SG F G+++  C F  I     G   +    K P+RS+P ATF S+ +VT
Sbjct: 232 VSGMFAGAAS--CFFAYIG--FDGLATAGEEAKDPARSIPIATFSSMTIVT 278


>U61952-2|AAB03160.1|  509|Caenorhabditis elegans Cytochrome p450
           family protein 33E2 protein.
          Length = 509

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
 Frame = +2

Query: 419 VFI*QELVIIY*FQ-FYWRRRNLMVKPL 499
           +FI   +V IY F  FYW+RRNL   PL
Sbjct: 3   LFIVLSIVSIYLFDLFYWKRRNLPPGPL 30


>U41541-1|ABA54425.1|  795|Caenorhabditis elegans Hypothetical
           protein C41A3.2a protein.
          Length = 795

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 21/77 (27%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
 Frame = +1

Query: 49  LKTILFSIKIT*RMS--ASKLDAVYRSILLTKFFTKGWGKPENLRRLFEFRKVVSNREEC 222
           +K + FS  I  R+S    K D+V R+ L+ K +   + +  +   +  + +   N E  
Sbjct: 673 IKALQFSESILNRISNITEKTDSVERAKLILKNYRILYDEAVDFMGITSYLRTRLNTE-- 730

Query: 223 FKLVERDYPVTITKEQN 273
           F ++E DY +T+T+ +N
Sbjct: 731 FFVMEEDYLLTVTQTEN 747


>AF045641-2|AAC02578.2| 1370|Caenorhabditis elegans Hypothetical
            protein F53H1.4a protein.
          Length = 1370

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 19/64 (29%), Positives = 29/64 (45%)
 Frame = -2

Query: 338  IPGRCFSRGLVKYPSRSLPSATFCSLVMVTG*SLSTNLKHSSRFDTTFLNSNNLRKFSGL 159
            IPG+  S    ++ +RSLP       V  +   L  +L    R    ++ ++N RKFS  
Sbjct: 1281 IPGQSRSTRNAQHENRSLPDIEQDLDVYTSAEQLHEHLSQFFRHARGYIETHNPRKFSKF 1340

Query: 158  PQPF 147
              PF
Sbjct: 1341 SCPF 1344


>Z99278-8|CAE18037.1|  133|Caenorhabditis elegans Hypothetical
           protein Y53C12B.7 protein.
          Length = 133

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 15/55 (27%), Positives = 27/55 (49%)
 Frame = -3

Query: 670 PIPLAPVE*HQRLQDQAASHHKYIRDIVERRTDLINRFTKSIKWVLKNDTANTGF 506
           PIPL P   H     +++SHH+ ++ +   R   I ++ K I  + K     +G+
Sbjct: 79  PIPLLPYHEHFATSAESSSHHQKLKALA--REHKILKWAKEIGGIAKKRRRRSGW 131


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,462,680
Number of Sequences: 27780
Number of extensions: 387663
Number of successful extensions: 1262
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1202
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1260
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)