Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt9m19
(672 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0577 + 4280590-4281225,4281749-4282102,4282214-4282412,428... 40 0.001
03_06_0658 - 35335639-35335731,35335814-35335871,35336213-353363... 38 0.006
02_05_0403 - 28696043-28696153,28696245-28696347,28696443-286965... 38 0.006
02_04_0049 + 19238794-19239003,19239359-19239505,19239595-192397... 38 0.010
04_03_0824 + 20086639-20087263,20087282-20087463,20087569-200877... 37 0.013
04_03_0305 - 14125193-14125421,14125666-14127104 36 0.029
01_06_0120 + 26622285-26622433,26623156-26623219,26623310-266233... 36 0.039
08_02_0851 - 21866088-21866210,21866311-21866413,21866531-218667... 35 0.051
06_03_0983 - 26559772-26559915,26560149-26560251,26560335-265605... 34 0.090
06_01_0414 + 2948868-2948998,2949136-2949202,2949442-2949531,295... 34 0.12
05_01_0243 - 1806770-1806832,1806942-1807061,1807275-1807457,180... 33 0.21
01_06_0002 - 25492807-25494675 33 0.27
05_07_0112 - 27755604-27756449,27756624-27756887,27757428-277575... 32 0.36
01_06_0271 - 28055367-28055402,28055503-28055622,28055710-280558... 32 0.36
12_02_0664 - 21659497-21659547,21659750-21659860,21659971-216600... 30 1.5
03_01_0228 + 1802038-1803265,1804207-1804245,1804638-1804783,180... 30 1.9
11_06_0086 + 19914234-19914382,19914590-19914653,19914793-199148... 29 2.6
07_01_1132 + 10531922-10532136,10532307-10532433,10532945-105331... 28 5.9
>02_01_0577 +
4280590-4281225,4281749-4282102,4282214-4282412,
4284991-4285204,4285299-4285401,4285481-4285639
Length = 554
Score = 40.3 bits (90), Expect = 0.001
Identities = 24/67 (35%), Positives = 31/67 (46%)
Frame = +3
Query: 249 GISLTYEELLIRADSMAYGLRNQGLQKGDRVGIWSHNSVSYLVSLVAAARAGLISVLINP 428
G S TY E+ + A GLR G+ KGD V N + S + AAR G + NP
Sbjct: 50 GESYTYAEVESASRRAAAGLRRMGVGKGDVVMSLLRNCPEFAFSFLGAARLGAATTTANP 109
Query: 429 AYEKKEL 449
Y E+
Sbjct: 110 FYTPHEV 116
>03_06_0658 -
35335639-35335731,35335814-35335871,35336213-35336355,
35336624-35336703,35336916-35337075,35337531-35337668,
35338487-35338567,35338640-35338693,35339192-35339297,
35339615-35339682,35340076-35340225,35340401-35340519,
35341151-35341362,35342118-35342205,35342365-35342479,
35343083-35343274,35343809-35344018
Length = 688
Score = 38.3 bits (85), Expect = 0.006
Identities = 34/119 (28%), Positives = 53/119 (44%), Gaps = 5/119 (4%)
Frame = +3
Query: 150 PGSEPLTL---ATLGDIIEETVHKFPGRVA-VKSMHEGIS-LTYEELLIRADSMAYGLRN 314
PG LT + DI K+ RVA V HE S LTY++L + GLR
Sbjct: 89 PGGNGLTTHDWMAVPDIWRTAAEKYADRVALVDPYHEPPSELTYKQLEQEILDFSQGLRA 148
Query: 315 QGLQKGDRVGIWSHNSVSYLVSLVAAARAGLISVLINPAYEKKELSFCIKKSEMKCLLI 491
G+ +++ +++ NS +LV+ G I+V+ +EL SE L++
Sbjct: 149 IGVAPDEKIALFADNSCRWLVADQGIMATGAINVVRGTRSSDEELFQIYTHSESIALVV 207
>02_05_0403 -
28696043-28696153,28696245-28696347,28696443-28696510,
28696582-28696727,28698038-28699124
Length = 504
Score = 38.3 bits (85), Expect = 0.006
Identities = 23/80 (28%), Positives = 37/80 (46%)
Frame = +3
Query: 249 GISLTYEELLIRADSMAYGLRNQGLQKGDRVGIWSHNSVSYLVSLVAAARAGLISVLINP 428
G + T+ E + A L G+ GDRV + N V + V+ AA+ G ++ NP
Sbjct: 66 GRTYTFAETRLLCRRAAAALHRLGVGHGDRVMVLLQNCVEFAVAFFAASFLGAVTTAANP 125
Query: 429 AYEKKELSFCIKKSEMKCLL 488
+E+ K S +K +L
Sbjct: 126 FCTPQEIHKQFKASGVKLIL 145
>02_04_0049 +
19238794-19239003,19239359-19239505,19239595-19239750,
19239870-19239992,19240073-19240241,19240700-19240782,
19240917-19241018,19241104-19241192,19241317-19241407,
19241734-19241847,19242371-19242447,19242534-19242612,
19242710-19242778,19243022-19243197,19243309-19243365,
19243460-19243550,19243644-19243742,19243878-19244063
Length = 705
Score = 37.5 bits (83), Expect = 0.010
Identities = 23/84 (27%), Positives = 44/84 (52%)
Frame = +3
Query: 258 LTYEELLIRADSMAYGLRNQGLQKGDRVGIWSHNSVSYLVSLVAAARAGLISVLINPAYE 437
LTY ELL R +A L++ G+ KGD V I+ + ++++A AR G + ++ +
Sbjct: 160 LTYSELLDRVCQLANYLKSVGVGKGDAVIIYLPMLLELPIAMLACARIGAVHSVVFAGFS 219
Query: 438 KKELSFCIKKSEMKCLLIGDALPK 509
L+ I + K ++ +A+ +
Sbjct: 220 ADSLAQRIVDCKPKLVITCNAVKR 243
>04_03_0824 +
20086639-20087263,20087282-20087463,20087569-20087724,
20087867-20087989,20088079-20088247,20088384-20088466,
20088641-20088742,20089246-20089359,20089735-20089811,
20089884-20089962,20090060-20090128,20090235-20090410,
20090460-20090561,20090678-20090768,20090878-20090976,
20091141-20091326
Length = 810
Score = 37.1 bits (82), Expect = 0.013
Identities = 23/95 (24%), Positives = 49/95 (51%)
Frame = +3
Query: 258 LTYEELLIRADSMAYGLRNQGLQKGDRVGIWSHNSVSYLVSLVAAARAGLISVLINPAYE 437
LTY ELL + +A L++ G+ KGD V I+ + ++++A AR G + ++ +
Sbjct: 310 LTYSELLNKVCQLANYLKSVGVGKGDAVVIYLPMLMELPIAMLACARIGAVHSVVFAGFS 369
Query: 438 KKELSFCIKKSEMKCLLIGDALPKREYYRTLEQLI 542
L+ I + K ++ +A+ + + L+ ++
Sbjct: 370 ADALAQRIIDCKPKVVITCNAVKRGKKLIALKDIV 404
>04_03_0305 - 14125193-14125421,14125666-14127104
Length = 555
Score = 35.9 bits (79), Expect = 0.029
Identities = 28/108 (25%), Positives = 49/108 (45%), Gaps = 1/108 (0%)
Frame = +3
Query: 177 TLGDIIEETVHKFPGRVA-VKSMHEGISLTYEELLIRADSMAYGLRNQGLQKGDRVGIWS 353
T+ + + + + RVA V++ G S TY E+ A LR+ G++KG V +
Sbjct: 34 TVPEFVLDGAEAYADRVALVEAAAGGRSYTYGEVARDTARFARALRSVGVRKGHVVVVAL 93
Query: 354 HNSVSYLVSLVAAARAGLISVLINPAYEKKELSFCIKKSEMKCLLIGD 497
N Y V + AG + +NP E+ ++ SE K ++ +
Sbjct: 94 PNLAVYPVVSLGIMSAGAVFSGVNPRALAAEIKKQVEDSEAKLVVANE 141
>01_06_0120 +
26622285-26622433,26623156-26623219,26623310-26623399,
26623588-26623644,26623832-26623880,26624320-26624396,
26624918-26624957,26625037-26625131,26625525-26625689,
26625777-26625887,26625971-26626058,26626715-26626781,
26626955-26627063,26627155-26627272,26628345-26628590,
26628956-26629095,26629262-26629444,26629560-26629679,
26629932-26629967
Length = 667
Score = 35.5 bits (78), Expect = 0.039
Identities = 24/105 (22%), Positives = 49/105 (46%), Gaps = 7/105 (6%)
Frame = +3
Query: 186 DIIEETVHKFPGR--VAVKSMHEG-----ISLTYEELLIRADSMAYGLRNQGLQKGDRVG 344
DI V KFP + + + +G + TY+E+ + + +R++GL KG R G
Sbjct: 47 DIFRMAVEKFPDNRMLGHREIVDGKAGAYVWKTYKEVFDLSTKIGNSIRSRGLAKGSRCG 106
Query: 345 IWSHNSVSYLVSLVAAARAGLISVLINPAYEKKELSFCIKKSEMK 479
I+ N +++++ A G+ V + + F + +E++
Sbjct: 107 IYGANCPEWIITMEACNAHGIYCVPLYDTLGAGAVEFILCHAEVE 151
>08_02_0851 -
21866088-21866210,21866311-21866413,21866531-21866744,
21866877-21867075,21867171-21868151
Length = 539
Score = 35.1 bits (77), Expect = 0.051
Identities = 18/68 (26%), Positives = 38/68 (55%)
Frame = +3
Query: 249 GISLTYEELLIRADSMAYGLRNQGLQKGDRVGIWSHNSVSYLVSLVAAARAGLISVLINP 428
G +L++ ++ + +A GL + G+ G V + NSV + V+ +A++R G ++ NP
Sbjct: 48 GETLSFGDVDALSRRVAAGLSSIGVCHGSTVMLLLPNSVEFAVAFLASSRLGAVTTTANP 107
Query: 429 AYEKKELS 452
+ E++
Sbjct: 108 LHTPPEIA 115
>06_03_0983 -
26559772-26559915,26560149-26560251,26560335-26560548,
26563352-26563550,26564509-26564862,26565430-26566086
Length = 556
Score = 34.3 bits (75), Expect = 0.090
Identities = 23/61 (37%), Positives = 29/61 (47%)
Frame = +3
Query: 267 EELLIRADSMAYGLRNQGLQKGDRVGIWSHNSVSYLVSLVAAARAGLISVLINPAYEKKE 446
EEL RA A GLR G+ KGD V N + + + AAR G + NP Y E
Sbjct: 63 EELSRRA---AAGLRRLGVGKGDVVMSLLRNCPEFAFTFLGAARLGAATTTANPFYTPHE 119
Query: 447 L 449
+
Sbjct: 120 I 120
>06_01_0414 +
2948868-2948998,2949136-2949202,2949442-2949531,
2950509-2950565,2950684-2950732,2950934-2951010,
2952776-2952815,2952909-2953003,2953174-2953341,
2953634-2953721,2954275-2954341,2954571-2954646,
2954759-2954876,2954988-2955233,2955296-2955471,
2956056-2956238,2956331-2956450,2956586-2956621
Length = 627
Score = 33.9 bits (74), Expect = 0.12
Identities = 24/110 (21%), Positives = 49/110 (44%), Gaps = 8/110 (7%)
Frame = +3
Query: 186 DIIEETVHKFP-----GRVAVKS---MHEGISLTYEELLIRADSMAYGLRNQGLQKGDRV 341
D+ +V K+P GR V E + +TY+E+ +A + G+ KG+
Sbjct: 41 DVFRNSVEKYPDSPMLGRRRVVDDGKAGEYVWMTYKEVYDVVMKLAASISKSGISKGESC 100
Query: 342 GIWSHNSVSYLVSLVAAARAGLISVLINPAYEKKELSFCIKKSEMKCLLI 491
GI+ N +++S+ A G+ V + + + F + +E++ +
Sbjct: 101 GIYGANCPEWIISMEACNALGVSCVPLYDSLGAGAVEFIVCHAEIQIAFV 150
>05_01_0243 -
1806770-1806832,1806942-1807061,1807275-1807457,
1807554-1807693,1807768-1808010,1808664-1808781,
1808902-1808977,1809054-1809120,1809201-1809288,
1809381-1809491,1809632-1809799,1809946-1810040,
1810123-1810162,1810242-1810318,1810607-1810655,
1810756-1810812,1810959-1811048,1811160-1811223,
1812085-1812245
Length = 669
Score = 33.1 bits (72), Expect = 0.21
Identities = 18/79 (22%), Positives = 36/79 (45%)
Frame = +3
Query: 261 TYEELLIRADSMAYGLRNQGLQKGDRVGIWSHNSVSYLVSLVAAARAGLISVLINPAYEK 440
+Y E+ + L+ G++ G R+GI+ N ++V++ A LI V +
Sbjct: 83 SYREVYEEVLQVGSALQQLGVKPGSRIGIYGSNCPQWIVAMQACNGYSLICVPLYDTLGA 142
Query: 441 KELSFCIKKSEMKCLLIGD 497
+ F I +E+ + + D
Sbjct: 143 GAVDFIIDHAEIDVIFVQD 161
>01_06_0002 - 25492807-25494675
Length = 622
Score = 32.7 bits (71), Expect = 0.27
Identities = 20/58 (34%), Positives = 32/58 (55%)
Frame = +3
Query: 255 SLTYEELLIRADSMAYGLRNQGLQKGDRVGIWSHNSVSYLVSLVAAARAGLISVLINP 428
+LTY EL MA GL + L++GD V + + + + + A RAGL++V + P
Sbjct: 53 TLTYSELDSAVQRMAAGLL-EVLRRGDTVLVLASPGIRLVKLMFACQRAGLVAVPVIP 109
>05_07_0112 - 27755604-27756449,27756624-27756887,27757428-27757532,
27757626-27758249,27759048-27759596,27759665-27760372,
27760449-27760658,27761266-27761421,27761524-27761664,
27762015-27762101,27762209-27762309,27763071-27763293,
27763384-27763548,27763621-27763713,27763801-27764292,
27764729-27764805,27765184-27765681,27765818-27766046
Length = 1855
Score = 32.3 bits (70), Expect = 0.36
Identities = 26/99 (26%), Positives = 44/99 (44%), Gaps = 1/99 (1%)
Frame = +3
Query: 111 SNLRSTTDSYLHNPGSEPLTLATLGDIIE-ETVHKFPGRVAVKSMHEGISLTYEELLIRA 287
S + S T +H SE +L TL ++ T P ++ + HEG S + ++ I
Sbjct: 956 SIVNSLTTPLIHTKSSESSSLRTLDKSVQVRTTSDLPAEISSDN-HEGASDSAQDAEIDE 1014
Query: 288 DSMAYGLRNQGLQKGDRVGIWSHNSVSYLVSLVAAARAG 404
+ QGL +GD + ++ LV+L+ A G
Sbjct: 1015 SNQGESWV-QGLAEGDYCDLSVEERLNALVALIGVATEG 1052
>01_06_0271 -
28055367-28055402,28055503-28055622,28055710-28055892,
28056006-28056145,28056347-28056595,28056706-28056823,
28056924-28056999,28057096-28057162,28057282-28057369,
28057506-28057616,28058127-28058221,28058305-28058344,
28058736-28058812,28058978-28059026,28059464-28059520,
28059624-28059713,28059833-28059896,28060076-28060245
Length = 609
Score = 32.3 bits (70), Expect = 0.36
Identities = 18/78 (23%), Positives = 36/78 (46%)
Frame = +3
Query: 258 LTYEELLIRADSMAYGLRNQGLQKGDRVGIWSHNSVSYLVSLVAAARAGLISVLINPAYE 437
+TY+E + +R+ G+ KG R GI+ N +++S+ A G+ V +
Sbjct: 85 ITYKEAYDTVIKVGASIRSLGVGKGGRCGIYGANCPEWVISMQACNAHGIYCVPLYDTLG 144
Query: 438 KKELSFCIKKSEMKCLLI 491
+ F + +E++ I
Sbjct: 145 AGAVEFILCHAEVEIAFI 162
>12_02_0664 -
21659497-21659547,21659750-21659860,21659971-21660039,
21660442-21660513,21660669-21660749,21661256-21661348,
21661581-21661733,21661846-21661897,21662033-21662218,
21662830-21662949,21663059-21663297
Length = 408
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +3
Query: 471 EMKCLLIGDALPKREYYRTLEQLIPELKDGKPGLLKSREFPFL 599
+++CL I A+ + Y+R + P + KP L++SR FP L
Sbjct: 239 QLRCL-IPCAIDQDPYFRMTRDVAPRIGYQKPSLIESRFFPAL 280
>03_01_0228 +
1802038-1803265,1804207-1804245,1804638-1804783,
1804891-1804958,1805045-1805147,1805287-1805400
Length = 565
Score = 29.9 bits (64), Expect = 1.9
Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
Frame = +3
Query: 219 GRVAVKSMHEGISLTYEEL--LIRADSMAYGLRNQGLQKGDRVGIWSHNSVSYLVSLVAA 392
G VA+ G +T+ EL + + A L+KG I S NSV + V+ +AA
Sbjct: 50 GVVALVDAATGRRITFTELWRAVAGAASALAAHPVSLRKGHVALILSPNSVHFPVAALAA 109
Query: 393 ARAGLISVLINPAYEKKELS 452
G + NP E++
Sbjct: 110 MSLGAVLTTANPLNTPAEIA 129
>11_06_0086 +
19914234-19914382,19914590-19914653,19914793-19914882,
19915000-19915056,19915147-19915195,19915393-19915469,
19915686-19915725,19915813-19915907,19916007-19916171,
19916317-19916427,19916515-19916602,19916691-19916757,
19916822-19916939,19917022-19917139,19917398-19917643,
19917736-19917833,19917961-19918143,19918237-19918356,
19918515-19918565
Length = 661
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/81 (18%), Positives = 37/81 (45%)
Frame = +3
Query: 258 LTYEELLIRADSMAYGLRNQGLQKGDRVGIWSHNSVSYLVSLVAAARAGLISVLINPAYE 437
LTYEE+ + + +R+ ++ G GI+ N +++++ A G+ V +
Sbjct: 78 LTYEEVYQKVIKIGSAIRSLRVKPGGHCGIYGSNCPEWVMAMQACNSQGICYVPLYDTLG 137
Query: 438 KKELSFCIKKSEMKCLLIGDA 500
+ F + +E+ + ++
Sbjct: 138 ANAVEFIMDHAEISIAFVQES 158
>07_01_1132 +
10531922-10532136,10532307-10532433,10532945-10533100,
10533755-10533847,10534010-10534090,10534205-10534276,
10534608-10534676,10534764-10534874,10535039-10535089
Length = 324
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +3
Query: 486 LIGDALPKREYYRTLEQLIPELKDGKPGLLKSREFPFL 599
LI A+ + Y+R + P+L KP L++SR FP L
Sbjct: 159 LIPCAIDQDPYFRMTCDVAPKLGFQKPSLIESRFFPAL 196
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,330,299
Number of Sequences: 37544
Number of extensions: 278106
Number of successful extensions: 614
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 600
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 614
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1703141568
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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