Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt9m19
(672 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF125955-10|AAV58866.1| 578|Caenorhabditis elegans Hypothetical... 114 6e-26
AF125955-9|AAV58865.1| 597|Caenorhabditis elegans Hypothetical ... 114 6e-26
AF125955-8|AAD14712.1| 623|Caenorhabditis elegans Hypothetical ... 114 6e-26
Z81071-2|CAB03012.1| 618|Caenorhabditis elegans Hypothetical pr... 106 2e-23
AF098989-3|AAK18953.2| 569|Caenorhabditis elegans Hypothetical ... 63 2e-10
U97550-5|AAK18982.2| 497|Caenorhabditis elegans Hypothetical pr... 52 4e-07
U40938-6|AAA81698.1| 655|Caenorhabditis elegans Hypothetical pr... 52 5e-07
Z70684-10|CAA94602.2| 684|Caenorhabditis elegans Hypothetical p... 49 3e-06
U41028-1|AAA82354.1| 532|Caenorhabditis elegans Hypothetical pr... 44 7e-05
AL032658-2|CAA21744.1| 687|Caenorhabditis elegans Hypothetical ... 38 0.005
U88308-2|AAM15557.1| 313|Caenorhabditis elegans Hypothetical pr... 38 0.006
U88308-1|AAB42324.2| 461|Caenorhabditis elegans Hypothetical pr... 38 0.006
Z66495-9|CAH19100.1| 670|Caenorhabditis elegans Hypothetical pr... 34 0.11
Z66495-8|CAA91274.1| 680|Caenorhabditis elegans Hypothetical pr... 34 0.11
AF016686-12|AAB66234.1| 723|Caenorhabditis elegans Hypothetical... 34 0.11
Z35595-8|CAA84640.1| 540|Caenorhabditis elegans Hypothetical pr... 33 0.14
U23521-8|AAC46810.4| 505|Caenorhabditis elegans Hypothetical pr... 33 0.24
AF016449-14|AAG23991.1| 517|Caenorhabditis elegans Hypothetical... 32 0.32
Z70287-10|CAA94299.2| 339|Caenorhabditis elegans Hypothetical p... 31 0.56
AL032631-8|CAB63342.2| 405|Caenorhabditis elegans Hypothetical ... 29 2.3
X53314-1|CAA37396.1| 294|Caenorhabditis elegans deg-1 product p... 29 3.0
U67951-5|AAB07574.2| 778|Caenorhabditis elegans Degeneration of... 29 3.0
L34414-1|AAA99524.1| 778|Caenorhabditis elegans degenerin protein. 29 3.0
U41625-5|AAA83327.1| 700|Caenorhabditis elegans Suppressor of a... 28 5.3
AY091467-1|AAM44123.1| 700|Caenorhabditis elegans SUR-5 protein. 28 5.3
AF003136-7|ABE73336.1| 1539|Caenorhabditis elegans Hypothetical ... 28 6.9
Z46935-10|CAA87054.1| 1244|Caenorhabditis elegans Hypothetical p... 27 9.2
Z46794-13|CAA86786.1| 1244|Caenorhabditis elegans Hypothetical p... 27 9.2
U96387-1|AAC47834.1| 1244|Caenorhabditis elegans mitotic chromos... 27 9.2
AL031266-2|CAA20330.1| 1244|Caenorhabditis elegans Hypothetical ... 27 9.2
>AF125955-10|AAV58866.1| 578|Caenorhabditis elegans Hypothetical
protein F46E10.1c protein.
Length = 578
Score = 114 bits (274), Expect = 6e-26
Identities = 61/176 (34%), Positives = 101/176 (57%), Gaps = 6/176 (3%)
Frame = +3
Query: 135 SYLHNPGSEPLTLATLGDIIEETVHKFPGRVAVKSMHEGISLTYEELLIRADSMAYGLRN 314
SY+H + PL T+GD + V + P + + EGI TY ++ A+++A GL +
Sbjct: 8 SYVHGCSTVPLLFETVGDRLRSAVDQVPDKEFLIFKREGIRKTYSQVATDAENLACGLLH 67
Query: 315 QGLQKGDRVGIWSHNSVSYLVSLVAAARAGLISVLINPAYEKKELSFCIKKSEMKCLLIG 494
GL+KGDR+GIW N+ + + A+A AG++ V INP+Y+ +EL + I+K ++ L+
Sbjct: 68 LGLKKGDRIGIWGPNTYEWTTTQFASALAGMVLVNINPSYQSEELRYAIEKVGIRALITP 127
Query: 495 DALPKREYYRTLEQLIPELKDGKPGL--LKSREFP-FLSSIIADGRNKI---AWYY 644
K YY++++ ++PE+ +PG + SR F F I+ D +KI AW Y
Sbjct: 128 PGFKKSNYYQSIKDILPEVTLKEPGKSGITSRNFTCFQHLIMFDEEDKIYPGAWKY 183
>AF125955-9|AAV58865.1| 597|Caenorhabditis elegans Hypothetical
protein F46E10.1b protein.
Length = 597
Score = 114 bits (274), Expect = 6e-26
Identities = 61/176 (34%), Positives = 101/176 (57%), Gaps = 6/176 (3%)
Frame = +3
Query: 135 SYLHNPGSEPLTLATLGDIIEETVHKFPGRVAVKSMHEGISLTYEELLIRADSMAYGLRN 314
SY+H + PL T+GD + V + P + + EGI TY ++ A+++A GL +
Sbjct: 27 SYVHGCSTVPLLFETVGDRLRSAVDQVPDKEFLIFKREGIRKTYSQVATDAENLACGLLH 86
Query: 315 QGLQKGDRVGIWSHNSVSYLVSLVAAARAGLISVLINPAYEKKELSFCIKKSEMKCLLIG 494
GL+KGDR+GIW N+ + + A+A AG++ V INP+Y+ +EL + I+K ++ L+
Sbjct: 87 LGLKKGDRIGIWGPNTYEWTTTQFASALAGMVLVNINPSYQSEELRYAIEKVGIRALITP 146
Query: 495 DALPKREYYRTLEQLIPELKDGKPGL--LKSREFP-FLSSIIADGRNKI---AWYY 644
K YY++++ ++PE+ +PG + SR F F I+ D +KI AW Y
Sbjct: 147 PGFKKSNYYQSIKDILPEVTLKEPGKSGITSRNFTCFQHLIMFDEEDKIYPGAWKY 202
>AF125955-8|AAD14712.1| 623|Caenorhabditis elegans Hypothetical
protein F46E10.1a protein.
Length = 623
Score = 114 bits (274), Expect = 6e-26
Identities = 61/176 (34%), Positives = 101/176 (57%), Gaps = 6/176 (3%)
Frame = +3
Query: 135 SYLHNPGSEPLTLATLGDIIEETVHKFPGRVAVKSMHEGISLTYEELLIRADSMAYGLRN 314
SY+H + PL T+GD + V + P + + EGI TY ++ A+++A GL +
Sbjct: 53 SYVHGCSTVPLLFETVGDRLRSAVDQVPDKEFLIFKREGIRKTYSQVATDAENLACGLLH 112
Query: 315 QGLQKGDRVGIWSHNSVSYLVSLVAAARAGLISVLINPAYEKKELSFCIKKSEMKCLLIG 494
GL+KGDR+GIW N+ + + A+A AG++ V INP+Y+ +EL + I+K ++ L+
Sbjct: 113 LGLKKGDRIGIWGPNTYEWTTTQFASALAGMVLVNINPSYQSEELRYAIEKVGIRALITP 172
Query: 495 DALPKREYYRTLEQLIPELKDGKPGL--LKSREFP-FLSSIIADGRNKI---AWYY 644
K YY++++ ++PE+ +PG + SR F F I+ D +KI AW Y
Sbjct: 173 PGFKKSNYYQSIKDILPEVTLKEPGKSGITSRNFTCFQHLIMFDEEDKIYPGAWKY 228
>Z81071-2|CAB03012.1| 618|Caenorhabditis elegans Hypothetical
protein F28F8.2 protein.
Length = 618
Score = 106 bits (254), Expect = 2e-23
Identities = 60/169 (35%), Positives = 86/169 (50%), Gaps = 2/169 (1%)
Frame = +3
Query: 120 RSTTDSYLHNPGSEPLTLATLGDIIEETVHKFPGRVAVKSMHEGISLTYEELLIRADSMA 299
R T+SY+H + PL TLG + T + P + I TYEE MA
Sbjct: 41 RQHTNSYIHGTSNIPLRNETLGQTLRNTTERVPDKEFCVFSKYPIRKTYEEFYHDVRQMA 100
Query: 300 YGLRNQGLQKGDRVGIWSHNSVSYLVSLVAAARAGLISVLINPAYEKKELSFCIKKSEMK 479
L GL+KGDRVG+W N ++V A A AG+I V +NP Y +EL F ++K+ MK
Sbjct: 101 ASLYTLGLEKGDRVGVWGPNYYEWVVLQYACAFAGVIQVNVNPHYLHEELRFVMRKTGMK 160
Query: 480 CLLIGDALPKREYYRTLEQLIPELKDGKPGL--LKSREFPFLSSIIADG 620
L Y T+ + +PE++ G+PG+ +KS + P L I+ G
Sbjct: 161 VLFAPKRHKHSNYVHTMLEAMPEMRRGQPGVGHIKSHDIPELRHIVLYG 209
>AF098989-3|AAK18953.2| 569|Caenorhabditis elegans Hypothetical
protein F47G6.2 protein.
Length = 569
Score = 62.9 bits (146), Expect = 2e-10
Identities = 41/133 (30%), Positives = 67/133 (50%), Gaps = 3/133 (2%)
Frame = +3
Query: 222 RVAVKSMHEGISLTYEELLIRADSMAYGLRNQGLQKGDRVGIWSHNSVSYLVSLVAAARA 401
RVA E +SLT+ +++ +S+A G + GL++GDRV + N ++ +A +RA
Sbjct: 48 RVAAVFDSEKLSLTFSKIVSEMESLAAGFLSIGLKQGDRVLVAGSNHSQVMLCALACSRA 107
Query: 402 GLISVLINPAYEKK-ELSFCIKKSEMKCLLIGDA--LPKREYYRTLEQLIPELKDGKPGL 572
GL+ L NP Y L ++ E +C++ A L ++ PEL + G
Sbjct: 108 GLVFSLANPNYPNSYSLKRALELGEFQCIVCFRAHQYEADHLNNLLLEIAPELMRSRKGQ 167
Query: 573 LKSREFPFLSSII 611
LKS P L+ +I
Sbjct: 168 LKSELLPKLTHVI 180
>U97550-5|AAK18982.2| 497|Caenorhabditis elegans Hypothetical
protein T20F7.7 protein.
Length = 497
Score = 52.0 bits (119), Expect = 4e-07
Identities = 32/124 (25%), Positives = 60/124 (48%)
Frame = +3
Query: 186 DIIEETVHKFPGRVAVKSMHEGISLTYEELLIRADSMAYGLRNQGLQKGDRVGIWSHNSV 365
D+I E V KF R A+ +H+ +T+EE+ + Y L G+ +GD + + NS+
Sbjct: 12 DLILENVVKFGIRQAL--VHDNQVITFEEIPQLVSKLVYKLLELGISQGDTILVCLPNSI 69
Query: 366 SYLVSLVAAARAGLISVLINPAYEKKELSFCIKKSEMKCLLIGDALPKREYYRTLEQLIP 545
Y + ++ A+ G + I+ E+ + +K+S K + + + K Y+ E +
Sbjct: 70 WYPLLFLSCAKIGAVLSGISHESTAGEIKYSLKQSGAKLVFTNEKVSKENYWALSENSVE 129
Query: 546 ELKD 557
L D
Sbjct: 130 VLPD 133
>U40938-6|AAA81698.1| 655|Caenorhabditis elegans Hypothetical
protein D1009.1a protein.
Length = 655
Score = 51.6 bits (118), Expect = 5e-07
Identities = 30/108 (27%), Positives = 55/108 (50%), Gaps = 1/108 (0%)
Frame = +3
Query: 186 DIIEETVHKFPGRVAVKSMHEGISLTYEELLIRADSMAYGLRNQGLQKGDRVGIWSHNSV 365
+I V + P +VA+ + G LTY+EL A+ A ++G + GD V ++ NS+
Sbjct: 84 EIFLNQVKQHPNKVAIIEIESGRQLTYQELNALANQYANLYVSEGYKMGDVVALFMENSI 143
Query: 366 SYLVSLVAAARAGLISVLINPAYEKKELSFCIKKSEMK-CLLIGDALP 506
+ + ++ G++S IN + + L+ I S+ K C+ + LP
Sbjct: 144 DFFAIWLGLSKIGVVSAFINSNLKLEPLAHSINVSKCKSCITNINLLP 191
>Z70684-10|CAA94602.2| 684|Caenorhabditis elegans Hypothetical
protein F28D1.9 protein.
Length = 684
Score = 49.2 bits (112), Expect = 3e-06
Identities = 24/101 (23%), Positives = 51/101 (50%)
Frame = +3
Query: 186 DIIEETVHKFPGRVAVKSMHEGISLTYEELLIRADSMAYGLRNQGLQKGDRVGIWSHNSV 365
++ + V K P + A+ + + TY E + A + G + GD V ++ NSV
Sbjct: 113 ELFLDIVKKNPNKPAMIDIETNTTETYAEFNAHCNRYANYFQGLGYRSGDVVALYMENSV 172
Query: 366 SYLVSLVAAARAGLISVLINPAYEKKELSFCIKKSEMKCLL 488
++ + + A+ G+++ IN ++++L CI S+ K ++
Sbjct: 173 EFVAAWMGLAKIGVVTAWINSNLKREQLVHCITASKTKAII 213
>U41028-1|AAA82354.1| 532|Caenorhabditis elegans Hypothetical
protein C25G6.3 protein.
Length = 532
Score = 44.4 bits (100), Expect = 7e-05
Identities = 24/78 (30%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Frame = +3
Query: 216 PGRVA-VKSMHEGISLTYEELLIRADSMAYGLRNQGLQKGDRVGIWSHNSVSYLVSLVAA 392
P ++A ++ + E +TYEEL+ + A + + G++ GDR+ + N+V Y++ +
Sbjct: 100 PAKIALIEEISEVRCVTYEELVDGSKRTANYMSHHGVKNGDRILMCMENTVEYVLYQLGG 159
Query: 393 ARAGLISVLINPAYEKKE 446
G I VLINP++ E
Sbjct: 160 FLLGAIPVLINPSHIASE 177
>AL032658-2|CAA21744.1| 687|Caenorhabditis elegans Hypothetical
protein Y76A2B.3 protein.
Length = 687
Score = 38.3 bits (85), Expect = 0.005
Identities = 33/136 (24%), Positives = 68/136 (50%), Gaps = 7/136 (5%)
Frame = +3
Query: 171 LATLGDIIEETVHKFPGRVAVKSMHEGIS----LTYEELLIRADSMAYGLRNQ-GLQKGD 335
+ATL D+ + + G V + G + LTY+++ +A +++ L ++ GL +
Sbjct: 72 VATLHDVFVKGKTESNGGPCVGTRSSGDADYEFLTYDDVHEQAKNLSMTLVHEFGLTPAN 131
Query: 336 --RVGIWSHNSVSYLVSLVAAARAGLISVLINPAYEKKELSFCIKKSEMKCLLIGDALPK 509
+GI++ NS +LVS VA ++ V + + +F I ++E+ +++ D+ K
Sbjct: 132 TTNIGIYARNSPQWLVSAVACVEQSMVVVPLYDTLGAEAATFIISQAEISVVIV-DSFKK 190
Query: 510 REYYRTLEQLIPELKD 557
E + +P LK+
Sbjct: 191 AESLIKNRENMPTLKN 206
>U88308-2|AAM15557.1| 313|Caenorhabditis elegans Hypothetical
protein C32E8.6b protein.
Length = 313
Score = 37.9 bits (84), Expect = 0.006
Identities = 20/72 (27%), Positives = 37/72 (51%)
Frame = +3
Query: 336 RVGIWSHNSVSYLVSLVAAARAGLISVLINPAYEKKELSFCIKKSEMKCLLIGDALPKRE 515
R+ ++ NS L +VA +G+ + +NP+Y+K E+ I KS +++ D + +
Sbjct: 57 RIALFCTNSPDILAIIVAGQLSGVTVIPLNPSYKKYEIDEYISKSIANFIIVSDDVDLDK 116
Query: 516 YYRTLEQLIPEL 551
+ LI EL
Sbjct: 117 FEEREVNLISEL 128
>U88308-1|AAB42324.2| 461|Caenorhabditis elegans Hypothetical
protein C32E8.6a protein.
Length = 461
Score = 37.9 bits (84), Expect = 0.006
Identities = 20/72 (27%), Positives = 37/72 (51%)
Frame = +3
Query: 336 RVGIWSHNSVSYLVSLVAAARAGLISVLINPAYEKKELSFCIKKSEMKCLLIGDALPKRE 515
R+ ++ NS L +VA +G+ + +NP+Y+K E+ I KS +++ D + +
Sbjct: 57 RIALFCTNSPDILAIIVAGQLSGVTVIPLNPSYKKYEIDEYISKSIANFIIVSDDVDLDK 116
Query: 516 YYRTLEQLIPEL 551
+ LI EL
Sbjct: 117 FEEREVNLISEL 128
>Z66495-9|CAH19100.1| 670|Caenorhabditis elegans Hypothetical
protein C36A4.9b protein.
Length = 670
Score = 33.9 bits (74), Expect = 0.11
Identities = 18/81 (22%), Positives = 40/81 (49%)
Frame = +3
Query: 261 TYEELLIRADSMAYGLRNQGLQKGDRVGIWSHNSVSYLVSLVAAARAGLISVLINPAYEK 440
TY EL + + LR+ G+++GD V ++ V+++A AR G + ++ +
Sbjct: 118 TYNELHAQVVQFSAVLRSHGVKRGDVVALYLPMIPELAVAMLACARIGAMHSVVFAGFSA 177
Query: 441 KELSFCIKKSEMKCLLIGDAL 503
+ L+ + + + L+ D +
Sbjct: 178 ESLAARVVDARCRVLVTADGV 198
>Z66495-8|CAA91274.1| 680|Caenorhabditis elegans Hypothetical
protein C36A4.9a protein.
Length = 680
Score = 33.9 bits (74), Expect = 0.11
Identities = 18/81 (22%), Positives = 40/81 (49%)
Frame = +3
Query: 261 TYEELLIRADSMAYGLRNQGLQKGDRVGIWSHNSVSYLVSLVAAARAGLISVLINPAYEK 440
TY EL + + LR+ G+++GD V ++ V+++A AR G + ++ +
Sbjct: 128 TYNELHAQVVQFSAVLRSHGVKRGDVVALYLPMIPELAVAMLACARIGAMHSVVFAGFSA 187
Query: 441 KELSFCIKKSEMKCLLIGDAL 503
+ L+ + + + L+ D +
Sbjct: 188 ESLAARVVDARCRVLVTADGV 208
>AF016686-12|AAB66234.1| 723|Caenorhabditis elegans Hypothetical
protein R07C3.4 protein.
Length = 723
Score = 33.9 bits (74), Expect = 0.11
Identities = 18/80 (22%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Frame = +3
Query: 258 LTYEELLIRADSMAYGLRNQGLQKGDR--VGIWSHNSVSYLVSLVAAARAGLISVLINPA 431
+TYE+ +D+++ +R G++ GD+ +GI+S N +++S +A +SV I
Sbjct: 111 ITYEQAFEISDNVSQAIRKLGIEIGDKSNIGIYSKNRPEWVLSDMAIHNFSNVSVPIYDN 170
Query: 432 YEKKELSFCIKKSEMKCLLI 491
+++ + E+ + +
Sbjct: 171 IPNEDMHYITNLCEIPLMFV 190
>Z35595-8|CAA84640.1| 540|Caenorhabditis elegans Hypothetical
protein C01G6.7 protein.
Length = 540
Score = 33.5 bits (73), Expect = 0.14
Identities = 25/95 (26%), Positives = 48/95 (50%), Gaps = 1/95 (1%)
Frame = +3
Query: 210 KFPGRVA-VKSMHEGISLTYEELLIRADSMAYGLRNQGLQKGDRVGIWSHNSVSYLVSLV 386
K P VA V + +E SL +++L + ++ G +KGD + S+N+ + +
Sbjct: 29 KDPDNVAFVTAENEDDSLGFQQLGKKVLQISEWFVENGYKKGDVFLLASYNNWRCFAAAL 88
Query: 387 AAARAGLISVLINPAYEKKELSFCIKKSEMKCLLI 491
A RAGLI + E+++ I+ S+ + +L+
Sbjct: 89 GAWRAGLIVSAAASQFTSFEMNYQIEDSQSQVILV 123
>U23521-8|AAC46810.4| 505|Caenorhabditis elegans Hypothetical
protein F41C3.3 protein.
Length = 505
Score = 32.7 bits (71), Expect = 0.24
Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Frame = +3
Query: 261 TYEELLIRADSMAYGLRNQ-GLQKGDRVGIWSHNSVSYLVSLVAAARAGLISVLINPAYE 437
TY E + R A L + ++KGDRV + +A + G + + +NP Y
Sbjct: 48 TYGEFVKRTGQYATALTEKYNIKKGDRVMARVSKTTDTAALYIACLQIGALYIPVNPGYT 107
Query: 438 KKELSFCIKKSEMKCLL 488
+ E + IK + L+
Sbjct: 108 ESEAAHYIKDATPSILV 124
>AF016449-14|AAG23991.1| 517|Caenorhabditis elegans Hypothetical
protein C50H11.1 protein.
Length = 517
Score = 32.3 bits (70), Expect = 0.32
Identities = 20/77 (25%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Frame = +3
Query: 246 EGISLTYEELLIRADSMAYGLRNQ-GLQKGDRVGIWSHNSVSYLVSLVAAARAGLISVLI 422
+G +TY + + RA A L + ++KGDRV + A + G + V +
Sbjct: 44 DGRKITYGDFVQRAGQYATALTEKYKIKKGDRVMARVSKTTDTAALYAACLQIGALYVPV 103
Query: 423 NPAYEKKELSFCIKKSE 473
NPA + E + +K ++
Sbjct: 104 NPALTQSEAAHYVKDAK 120
>Z70287-10|CAA94299.2| 339|Caenorhabditis elegans Hypothetical
protein R09E10.4a protein.
Length = 339
Score = 31.5 bits (68), Expect = 0.56
Identities = 19/86 (22%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Frame = +3
Query: 258 LTYEELLIRADSMAYGLRNQGLQKGD--RVGIWSHNSVSYLVSLVAAARAGLISVLINPA 431
+TY++ +D+++ +R G+ GD +GI+S N +++S +A +SV +
Sbjct: 113 ITYDQAFEISDNVSQAIRKLGIDTGDETNIGIYSKNRPEWILSDMAIHNFSNVSVPLYDT 172
Query: 432 YEKKELSFCIKKSEMKCLLIGDALPK 509
++ + E+ L+ D+ K
Sbjct: 173 ITNDDMHYITNLCEIS-LIFADSEDK 197
>AL032631-8|CAB63342.2| 405|Caenorhabditis elegans Hypothetical
protein Y106G6H.6 protein.
Length = 405
Score = 29.5 bits (63), Expect = 2.3
Identities = 26/100 (26%), Positives = 46/100 (46%), Gaps = 3/100 (3%)
Frame = +3
Query: 273 LLIRADSMAYGLRNQGLQKGDRVGIWSHNSVSYLVSLVAAARAGL--ISVLINPAYEKKE 446
L +R S A N +++ DR G W + ++ L++ A G+ + I A
Sbjct: 269 LKLRKYSEAIEAVNFAVERYDRAGEWQ-DDLAILLTYKAEGMIGIGRYNRAIEYALRVMN 327
Query: 447 LSFCIKKSEMKCLLIGDA-LPKREYYRTLEQLIPELKDGK 563
+ C + + +L+ A + KR Y + E +I LK+GK
Sbjct: 328 AAKCARARQRATMLVVMAYMRKRNYLKAHEYVIKLLKEGK 367
>X53314-1|CAA37396.1| 294|Caenorhabditis elegans deg-1 product
protein.
Length = 294
Score = 29.1 bits (62), Expect = 3.0
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Frame = +3
Query: 252 ISLTYEELL--IRADSMAYGLRNQGLQKGDRVGIWSHNSVSYLVSLVAAARAGLISVLIN 425
I + YE+L + +S AYGL N G +G+W SV V V +IS+
Sbjct: 198 IEVFYEQLNYELLQESEAYGLVNLIADFGGHLGLWLGFSV-ITVMEVCVLLVDMISLFFK 256
Query: 426 PAYEKKELSFCIKKSEM 476
+E+K L K+ ++
Sbjct: 257 SRHEEKLLRQSTKRKDV 273
>U67951-5|AAB07574.2| 778|Caenorhabditis elegans Degeneration of
certain neuronsprotein 1 protein.
Length = 778
Score = 29.1 bits (62), Expect = 3.0
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Frame = +3
Query: 252 ISLTYEELL--IRADSMAYGLRNQGLQKGDRVGIWSHNSVSYLVSLVAAARAGLISVLIN 425
I + YE+L + +S AYGL N G +G+W SV V V +IS+
Sbjct: 682 IEVFYEQLNYELLQESEAYGLVNLIADFGGHLGLWLGFSV-ITVMEVCVLLVDMISLFFK 740
Query: 426 PAYEKKELSFCIKKSEM 476
+E+K L K+ ++
Sbjct: 741 SRHEEKLLRQSTKRKDV 757
>L34414-1|AAA99524.1| 778|Caenorhabditis elegans degenerin protein.
Length = 778
Score = 29.1 bits (62), Expect = 3.0
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Frame = +3
Query: 252 ISLTYEELL--IRADSMAYGLRNQGLQKGDRVGIWSHNSVSYLVSLVAAARAGLISVLIN 425
I + YE+L + +S AYGL N G +G+W SV V V +IS+
Sbjct: 682 IEVFYEQLNYELLQESEAYGLVNLIADFGGHLGLWLGFSV-ITVMEVCVLLVDMISLFFK 740
Query: 426 PAYEKKELSFCIKKSEM 476
+E+K L K+ ++
Sbjct: 741 SRHEEKLLRQSTKRKDV 757
>U41625-5|AAA83327.1| 700|Caenorhabditis elegans Suppressor of
activated let-60ras protein 5 protein.
Length = 700
Score = 28.3 bits (60), Expect = 5.3
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +3
Query: 261 TYEELLIRADSMAYGLRNQGLQKGDRVGIWSHNSVSYLVSLVAAARAG 404
TY+ L +A LRN G+ GD V + N+ LV++ A A G
Sbjct: 158 TYDNLRKDVYRIATSLRNYGIGPGDTVCGFVPNTYDTLVAVFATAAVG 205
>AY091467-1|AAM44123.1| 700|Caenorhabditis elegans SUR-5 protein.
Length = 700
Score = 28.3 bits (60), Expect = 5.3
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +3
Query: 261 TYEELLIRADSMAYGLRNQGLQKGDRVGIWSHNSVSYLVSLVAAARAG 404
TY+ L +A LRN G+ GD V + N+ LV++ A A G
Sbjct: 158 TYDNLRKDVYRIATSLRNYGIGPGDTVCGFVPNTYDTLVAVFATAAVG 205
>AF003136-7|ABE73336.1| 1539|Caenorhabditis elegans Hypothetical
protein F28B3.1 protein.
Length = 1539
Score = 27.9 bits (59), Expect = 6.9
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +3
Query: 261 TYEELLIRADSMAYGLRNQG-LQKGDRVGIWSHNSVSYLVSLVAAARAGLISVLINP 428
T LL RA+ +A L ++ L +GD V + S+ + + AGL+ V I P
Sbjct: 969 TCSTLLKRAERIAGLLTDRARLSRGDHVALIFPPSIDLVAAFFGCLSAGLVPVCIKP 1025
>Z46935-10|CAA87054.1| 1244|Caenorhabditis elegans Hypothetical
protein M106.1 protein.
Length = 1244
Score = 27.5 bits (58), Expect = 9.2
Identities = 29/116 (25%), Positives = 48/116 (41%)
Frame = +3
Query: 234 KSMHEGISLTYEELLIRADSMAYGLRNQGLQKGDRVGIWSHNSVSYLVSLVAAARAGLIS 413
K H I + A M+ G+ ++G+R+ HN + +L A A S
Sbjct: 391 KGEHVSIESEIQSCKSTASQMSSGI-TAAKKRGERL----HNQIKHLEGEKATLSARSKS 445
Query: 414 VLINPAYEKKELSFCIKKSEMKCLLIGDALPKREYYRTLEQLIPELKDGKPGLLKS 581
+ + +KE+ K+ ++ I KRE+ L + I +LKD LL S
Sbjct: 446 DIGSADNYQKEVDEINKQLQLLGFNIDADTEKREHAAKLHESITKLKDMDTRLLNS 501
>Z46794-13|CAA86786.1| 1244|Caenorhabditis elegans Hypothetical
protein M106.1 protein.
Length = 1244
Score = 27.5 bits (58), Expect = 9.2
Identities = 29/116 (25%), Positives = 48/116 (41%)
Frame = +3
Query: 234 KSMHEGISLTYEELLIRADSMAYGLRNQGLQKGDRVGIWSHNSVSYLVSLVAAARAGLIS 413
K H I + A M+ G+ ++G+R+ HN + +L A A S
Sbjct: 391 KGEHVSIESEIQSCKSTASQMSSGI-TAAKKRGERL----HNQIKHLEGEKATLSARSKS 445
Query: 414 VLINPAYEKKELSFCIKKSEMKCLLIGDALPKREYYRTLEQLIPELKDGKPGLLKS 581
+ + +KE+ K+ ++ I KRE+ L + I +LKD LL S
Sbjct: 446 DIGSADNYQKEVDEINKQLQLLGFNIDADTEKREHAAKLHESITKLKDMDTRLLNS 501
>U96387-1|AAC47834.1| 1244|Caenorhabditis elegans mitotic chromosome
and X-chromosomeassociated MIX-1 protein protein.
Length = 1244
Score = 27.5 bits (58), Expect = 9.2
Identities = 29/116 (25%), Positives = 48/116 (41%)
Frame = +3
Query: 234 KSMHEGISLTYEELLIRADSMAYGLRNQGLQKGDRVGIWSHNSVSYLVSLVAAARAGLIS 413
K H I + A M+ G+ ++G+R+ HN + +L A A S
Sbjct: 391 KGEHVSIESEIQSCKSTASQMSSGI-TAAKKRGERL----HNQIKHLEGEKATLSARSKS 445
Query: 414 VLINPAYEKKELSFCIKKSEMKCLLIGDALPKREYYRTLEQLIPELKDGKPGLLKS 581
+ + +KE+ K+ ++ I KRE+ L + I +LKD LL S
Sbjct: 446 DIGSADNYQKEVDEINKQLQLLGFNIDADTEKREHAAKLHESITKLKDMDTRLLNS 501
>AL031266-2|CAA20330.1| 1244|Caenorhabditis elegans Hypothetical
protein M106.1 protein.
Length = 1244
Score = 27.5 bits (58), Expect = 9.2
Identities = 29/116 (25%), Positives = 48/116 (41%)
Frame = +3
Query: 234 KSMHEGISLTYEELLIRADSMAYGLRNQGLQKGDRVGIWSHNSVSYLVSLVAAARAGLIS 413
K H I + A M+ G+ ++G+R+ HN + +L A A S
Sbjct: 391 KGEHVSIESEIQSCKSTASQMSSGI-TAAKKRGERL----HNQIKHLEGEKATLSARSKS 445
Query: 414 VLINPAYEKKELSFCIKKSEMKCLLIGDALPKREYYRTLEQLIPELKDGKPGLLKS 581
+ + +KE+ K+ ++ I KRE+ L + I +LKD LL S
Sbjct: 446 DIGSADNYQKEVDEINKQLQLLGFNIDADTEKREHAAKLHESITKLKDMDTRLLNS 501
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,423,947
Number of Sequences: 27780
Number of extensions: 251241
Number of successful extensions: 626
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 610
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 625
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1518563232
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -