Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt9m14
         (671 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT010019-1|AAQ22488.1| 1506|Drosophila melanogaster RE10624p pro...    34   0.15 
AE014298-952|AAF46200.2| 1571|Drosophila melanogaster CG3126-PA,...    34   0.15 
AE014298-951|AAO41635.1| 1520|Drosophila melanogaster CG3126-PB,...    34   0.15 
AJ302712-1|CAC16870.1|  433|Drosophila melanogaster gag protein.       29   4.4  

>BT010019-1|AAQ22488.1| 1506|Drosophila melanogaster RE10624p
           protein.
          Length = 1506

 Score = 34.3 bits (75), Expect = 0.15
 Identities = 15/44 (34%), Positives = 24/44 (54%)
 Frame = -1

Query: 665 KETWEMSGSFNNCTITSNICH*TKSIKCLCATYTGNAVHSKCIH 534
           +++W    + NN ++TSN C+   S  C   + TGN +HS   H
Sbjct: 76  RQSWSPRDTNNNHSLTSNNCNCNSSNTCNSISATGNTLHSIKFH 119


>AE014298-952|AAF46200.2| 1571|Drosophila melanogaster CG3126-PA,
           isoform A protein.
          Length = 1571

 Score = 34.3 bits (75), Expect = 0.15
 Identities = 15/44 (34%), Positives = 24/44 (54%)
 Frame = -1

Query: 665 KETWEMSGSFNNCTITSNICH*TKSIKCLCATYTGNAVHSKCIH 534
           +++W    + NN ++TSN C+   S  C   + TGN +HS   H
Sbjct: 76  RQSWSPRDTNNNHSLTSNNCNCNSSNTCNSISATGNTLHSIKFH 119


>AE014298-951|AAO41635.1| 1520|Drosophila melanogaster CG3126-PB,
           isoform B protein.
          Length = 1520

 Score = 34.3 bits (75), Expect = 0.15
 Identities = 15/44 (34%), Positives = 24/44 (54%)
 Frame = -1

Query: 665 KETWEMSGSFNNCTITSNICH*TKSIKCLCATYTGNAVHSKCIH 534
           +++W    + NN ++TSN C+   S  C   + TGN +HS   H
Sbjct: 76  RQSWSPRDTNNNHSLTSNNCNCNSSNTCNSISATGNTLHSIKFH 119


>AJ302712-1|CAC16870.1|  433|Drosophila melanogaster gag protein.
          Length = 433

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
 Frame = +2

Query: 44  NRATVV*ILVKHSQNVRILKNASCI*TITKIMAMQTVK*LFSYA-SVNLRSFLHQTKHRS 220
           N++T   +LVK S+N   + N     + TK+ A  +     S   S+NL   L  +   S
Sbjct: 301 NQSTASVMLVKKSRNPNTITNTDLPTSSTKVPAPLSPTYPTSRTNSLNLEENLTSSPSTS 360

Query: 221 AKRDLAR*KKGCSSTSRS 274
            K D +  KK C   SRS
Sbjct: 361 DKTDFSYLKKTCIERSRS 378


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,012,051
Number of Sequences: 53049
Number of extensions: 509317
Number of successful extensions: 1168
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1138
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1167
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2910007350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)