Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt9m11
         (736 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79755-12|CAN86921.1|  142|Caenorhabditis elegans Hypothetical p...    48   5e-06
Z79755-11|CAN86920.1|  209|Caenorhabditis elegans Hypothetical p...    48   5e-06
AF000196-1|AAC24252.1|  158|Caenorhabditis elegans Hypothetical ...    43   3e-04
Z83104-3|CAB05476.1|  295|Caenorhabditis elegans Hypothetical pr...    33   0.28 
U41109-17|AAO12426.1|  726|Caenorhabditis elegans Hypothetical p...    29   4.5  
U41109-15|AAZ91354.1|  819|Caenorhabditis elegans Hypothetical p...    29   4.5  
U41109-14|AAO12423.1|  840|Caenorhabditis elegans Hypothetical p...    29   4.5  
AC087079-2|AAK27863.1|   67|Caenorhabditis elegans Hypothetical ...    29   4.5  
U21323-7|AAA62551.1|  465|Caenorhabditis elegans Hypothetical pr...    28   7.9  

>Z79755-12|CAN86921.1|  142|Caenorhabditis elegans Hypothetical
           protein F43G9.2b protein.
          Length = 142

 Score = 48.4 bits (110), Expect = 5e-06
 Identities = 18/49 (36%), Positives = 34/49 (69%)
 Frame = +1

Query: 298 FIEAQVQEGDTLQAIALRFYCSIAELKRINQIHKDNEIFARRTIKVPVT 444
           FIE +V+ GDTL  +A+++  ++AE+KR+N +  + +  A   +K+PV+
Sbjct: 39  FIERKVKNGDTLNKLAIKYQVNVAEIKRVNNMVSEQDFMALSKVKIPVS 87


>Z79755-11|CAN86920.1|  209|Caenorhabditis elegans Hypothetical
           protein F43G9.2a protein.
          Length = 209

 Score = 48.4 bits (110), Expect = 5e-06
 Identities = 18/49 (36%), Positives = 34/49 (69%)
 Frame = +1

Query: 298 FIEAQVQEGDTLQAIALRFYCSIAELKRINQIHKDNEIFARRTIKVPVT 444
           FIE +V+ GDTL  +A+++  ++AE+KR+N +  + +  A   +K+PV+
Sbjct: 39  FIERKVKNGDTLNKLAIKYQVNVAEIKRVNNMVSEQDFMALSKVKIPVS 87


>AF000196-1|AAC24252.1|  158|Caenorhabditis elegans Hypothetical
           protein B0041.3 protein.
          Length = 158

 Score = 42.7 bits (96), Expect = 3e-04
 Identities = 21/63 (33%), Positives = 37/63 (58%)
 Frame = +1

Query: 253 GRSDIQLYKIKPQEHFIEAQVQEGDTLQAIALRFYCSIAELKRINQIHKDNEIFARRTIK 432
           G +  Q   + P  + I  QVQ  DTL+ IAL+  CS++ L R N++   + +F ++ I+
Sbjct: 33  GTTQSQSSPVTPCSYTIY-QVQTDDTLERIALKHNCSVSSLVRANKLWSPSALFMKQFIR 91

Query: 433 VPV 441
           +P+
Sbjct: 92  IPI 94


>Z83104-3|CAB05476.1|  295|Caenorhabditis elegans Hypothetical
           protein F09B12.2 protein.
          Length = 295

 Score = 32.7 bits (71), Expect = 0.28
 Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 6/60 (10%)
 Frame = -1

Query: 622 QHCSQWHSLSPLFAVNCFDVTAVC------HCFVRVAVSILAFVSRLKVSALVALMVLTL 461
           +HC   HS+SPL A +C  V  VC      HC    AV +  F  R  V+A++ L ++TL
Sbjct: 103 KHCHSCHSMSPLRAHHC-PVCDVCILRRDHHCSFG-AVCVGHFNQRYFVAAVINLFIMTL 160


>U41109-17|AAO12426.1|  726|Caenorhabditis elegans Hypothetical
           protein F52E1.13d protein.
          Length = 726

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 13/43 (30%), Positives = 25/43 (58%)
 Frame = +1

Query: 313 VQEGDTLQAIALRFYCSIAELKRINQIHKDNEIFARRTIKVPV 441
           + E DTL+ +A    C++ EL ++N++     +F  + I VP+
Sbjct: 26  ITETDTLERVAASHDCTVGELMKLNKM-ASRMVFPGQKILVPL 67


>U41109-15|AAZ91354.1|  819|Caenorhabditis elegans Hypothetical
           protein F52E1.13c protein.
          Length = 819

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 13/43 (30%), Positives = 25/43 (58%)
 Frame = +1

Query: 313 VQEGDTLQAIALRFYCSIAELKRINQIHKDNEIFARRTIKVPV 441
           + E DTL+ +A    C++ EL ++N++     +F  + I VP+
Sbjct: 5   ITETDTLERVAASHDCTVGELMKLNKM-ASRMVFPGQKILVPL 46


>U41109-14|AAO12423.1|  840|Caenorhabditis elegans Hypothetical
           protein F52E1.13a protein.
          Length = 840

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 13/43 (30%), Positives = 25/43 (58%)
 Frame = +1

Query: 313 VQEGDTLQAIALRFYCSIAELKRINQIHKDNEIFARRTIKVPV 441
           + E DTL+ +A    C++ EL ++N++     +F  + I VP+
Sbjct: 26  ITETDTLERVAASHDCTVGELMKLNKM-ASRMVFPGQKILVPL 67


>AC087079-2|AAK27863.1|   67|Caenorhabditis elegans Hypothetical
           protein Y37E3.3 protein.
          Length = 67

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +1

Query: 298 FIEAQVQEGDTLQAIALRFYC 360
           F++++  EGD L A+ LR YC
Sbjct: 24  FLQSEYSEGDALDALGLRRYC 44


>U21323-7|AAA62551.1|  465|Caenorhabditis elegans Hypothetical
           protein C45G9.8 protein.
          Length = 465

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = +1

Query: 229 NNKKNDDNGRSDIQL-YKIKPQEHFIEAQVQEGDT 330
           N  K+DD G+SD  L + I+ QE FI ++    +T
Sbjct: 414 NESKSDDEGKSDKSLSFVIEKQEEFIYSRANPIET 448


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,038,410
Number of Sequences: 27780
Number of extensions: 294200
Number of successful extensions: 894
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 863
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 894
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1724918872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)