Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt9m06
         (642 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z22925-1|CAA80505.1|  211|Anopheles gambiae ANG12 precursor prot...    25   2.7  
DQ230893-2|ABD94312.1|  525|Anopheles gambiae iduronate 2-sulfat...    24   3.6  
AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small...    23   8.2  

>Z22925-1|CAA80505.1|  211|Anopheles gambiae ANG12 precursor
           protein.
          Length = 211

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = -2

Query: 572 GHEFSITTFDQFNRVSWVESL*SYLTINSVSIRREINIV 456
           G EFS   +DQF  +S V  L  YL    V     +N+V
Sbjct: 65  GEEFS-AVWDQFFELSAVRDLLQYLEEAGVPAYESLNVV 102


>DQ230893-2|ABD94312.1|  525|Anopheles gambiae iduronate 2-sulfatase
           precursor protein.
          Length = 525

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 15/59 (25%), Positives = 23/59 (38%)
 Frame = +3

Query: 84  YEYQDGPEFPKFLDNNDQLGHFRQRFYIKQGTIYMCGNSLGLACKDAEETLYEVLNKWK 260
           Y Y DG      +D   Q G F Q  + +Q       NS+    +     LY+  + W+
Sbjct: 47  YGYGDGNAITVNIDRLVQQGFFFQNAFAQQALCAPSRNSMLTGRRPDTVRLYDFYSYWR 105


>AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small
           GTPase protein.
          Length = 190

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 10/44 (22%), Positives = 21/44 (47%)
 Frame = +1

Query: 10  DSPAAETSKNFRNIAFTYVISLIICTSIKTDQNFQNFWTITTNW 141
           D+   E     R +++      +IC S+ +  +F+N   +T+ W
Sbjct: 60  DTAGQEDYDRLRPLSYPQTDVFLICYSVASPSSFEN---VTSKW 100


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 677,458
Number of Sequences: 2352
Number of extensions: 14383
Number of successful extensions: 17
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63141405
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)