Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt9m05
(730 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL021481-5|CAA16336.2| 455|Caenorhabditis elegans Hypothetical ... 89 4e-18
AF025468-4|AAB71045.1| 449|Caenorhabditis elegans Hypothetical ... 84 9e-17
U28928-4|AAA68337.2| 489|Caenorhabditis elegans Hypothetical pr... 77 1e-14
U28928-5|AAQ01535.1| 434|Caenorhabditis elegans Hypothetical pr... 73 3e-13
Z97191-2|CAB10025.1| 481|Caenorhabditis elegans Hypothetical pr... 58 8e-09
AL031630-22|CAA20995.2| 454|Caenorhabditis elegans Hypothetical... 47 1e-05
Z68748-8|CAL36498.1| 583|Caenorhabditis elegans Hypothetical pr... 41 0.001
Z68748-4|CAD27622.1| 617|Caenorhabditis elegans Hypothetical pr... 41 0.001
Z68748-3|CAA92953.2| 615|Caenorhabditis elegans Hypothetical pr... 41 0.001
AL034393-17|CAA22315.1| 503|Caenorhabditis elegans Hypothetical... 41 0.001
U23518-2|AAC70884.4| 496|Caenorhabditis elegans Hypothetical pr... 31 0.84
Z66511-4|CAA91316.1| 813|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z82279-1|CAB05259.2| 321|Caenorhabditis elegans Hypothetical pr... 29 2.6
U39742-9|AAK39194.1| 183|Caenorhabditis elegans Hypothetical pr... 29 2.6
AF125971-5|AAD14765.1| 484|Caenorhabditis elegans Hypothetical ... 29 2.6
AC024842-7|AAF59620.1| 457|Caenorhabditis elegans Hypothetical ... 29 3.4
AC103567-4|AAL35731.2| 598|Caenorhabditis elegans Hypothetical ... 29 4.5
AC006748-6|AAF60516.1| 582|Caenorhabditis elegans Hypothetical ... 29 4.5
AC006748-5|AAX55685.1| 471|Caenorhabditis elegans Hypothetical ... 29 4.5
Z68314-9|CAA92667.2| 2862|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z66497-12|CAA91289.2| 2862|Caenorhabditis elegans Hypothetical p... 28 5.9
AB223006-1|BAE16563.1| 2862|Caenorhabditis elegans Mediator comp... 28 5.9
>AL021481-5|CAA16336.2| 455|Caenorhabditis elegans Hypothetical
protein Y43F4B.7 protein.
Length = 455
Score = 88.6 bits (210), Expect = 4e-18
Identities = 48/161 (29%), Positives = 88/161 (54%)
Frame = +2
Query: 248 PMESNTSSFGALAHLLKASLGSGVLAMPLAFKNAGLLVGCIGTMLIGLICGHVIHILVKT 427
P E++ + A H++KA LG+G+L++PLAFK++GL +G I T+LI LIC + + +V
Sbjct: 44 PTENSLTPEQAFIHMVKAMLGTGLLSLPLAFKHSGLFLGLILTVLICLICLYCMRQVVFA 103
Query: 428 SQQLCVEVKKPALGYADTCEIVFQNGPKPIRKFASIARELVDWSLAVTHMGACCVYVVVI 607
+ +C + + YA+ + GP I++ ++LV+ ++ ++ +G CCVY V +
Sbjct: 104 AHFVCNRNGRDLIDYANIMRGAVEMGPPWIKRNGYFFKQLVNVNMFISQLGFCCVYFVFM 163
Query: 608 AESFRQVSVEYGGPDWSVTAYCALTLIVLIPLTQINKLKYL 730
A++ S + L LI ++ + I +L L
Sbjct: 164 ADNLEDFFNNNTSIHLSKAVWMLLLLIPMLSICSIRRLSIL 204
>AF025468-4|AAB71045.1| 449|Caenorhabditis elegans Hypothetical
protein T27A1.5 protein.
Length = 449
Score = 84.2 bits (199), Expect = 9e-17
Identities = 54/181 (29%), Positives = 91/181 (50%), Gaps = 1/181 (0%)
Frame = +2
Query: 191 LAYNGSRED-MGPYVPANHRPMESNTSSFGALAHLLKASLGSGVLAMPLAFKNAGLLVGC 367
L GS + MG + R S T+ AL H++K +G+G+L++PLAFK++G+ +G
Sbjct: 15 LPLRGSHQPTMGEMFASRVRDSRSITAD-QALIHMIKVMMGTGMLSLPLAFKHSGIWLGL 73
Query: 368 IGTMLIGLICGHVIHILVKTSQQLCVEVKKPALGYADTCEIVFQNGPKPIRKFASIAREL 547
I I LIC + L+ + ++ + YA+ + GP IR + +++
Sbjct: 74 ILLCFICLICIYCTRQLIFGQHYITFIKREQRMDYANVMRSAVELGPAWIRGHGYLFKQM 133
Query: 548 VDWSLAVTHMGACCVYVVVIAESFRQVSVEYGGPDWSVTAYCALTLIVLIPLTQINKLKY 727
V+ ++ V G CCVY V +A++ +Q + S + AL LI + L I +LK
Sbjct: 134 VNINMFVAQFGFCCVYFVFMADNLKQFFDQTSSIHISQAGWIALLLIPISALCTIRELKA 193
Query: 728 L 730
L
Sbjct: 194 L 194
>U28928-4|AAA68337.2| 489|Caenorhabditis elegans Hypothetical
protein C44B7.6a protein.
Length = 489
Score = 77.0 bits (181), Expect = 1e-14
Identities = 44/148 (29%), Positives = 76/148 (51%), Gaps = 2/148 (1%)
Frame = +2
Query: 170 NYSSKIELA--YNGSREDMGPYVPANHRPMESNTSSFGALAHLLKASLGSGVLAMPLAFK 343
N S+ +L ++ + E +GP + + SS AL +L+K LG+G ++PLAFK
Sbjct: 43 NVQSEYQLVSKWDEAEEALGPQRKMSFIERKEKISSKFALINLMKGMLGAGCFSVPLAFK 102
Query: 344 NAGLLVGCIGTMLIGLICGHVIHILVKTSQQLCVEVKKPALGYADTCEIVFQNGPKPIRK 523
+G + G + +++G +C + LVK + L + L Y + Q PIRK
Sbjct: 103 QSGYVSGLVIIVVLGFLCALCMIKLVKCAGYLSKVNQSAPLDYGNMAYKATQASYTPIRK 162
Query: 524 FASIARELVDWSLAVTHMGACCVYVVVI 607
A ++R LV+ SL + +G CC + + +
Sbjct: 163 LAPVSRALVNSSLCILQLGICCCFYIFV 190
>U28928-5|AAQ01535.1| 434|Caenorhabditis elegans Hypothetical
protein C44B7.6b protein.
Length = 434
Score = 72.5 bits (170), Expect = 3e-13
Identities = 38/114 (33%), Positives = 62/114 (54%)
Frame = +2
Query: 266 SSFGALAHLLKASLGSGVLAMPLAFKNAGLLVGCIGTMLIGLICGHVIHILVKTSQQLCV 445
SS AL +L+K LG+G ++PLAFK +G + G + +++G +C + LVK + L
Sbjct: 22 SSKFALINLMKGMLGAGCFSVPLAFKQSGYVSGLVIIVVLGFLCALCMIKLVKCAGYLSK 81
Query: 446 EVKKPALGYADTCEIVFQNGPKPIRKFASIARELVDWSLAVTHMGACCVYVVVI 607
+ L Y + Q PIRK A ++R LV+ SL + +G CC + + +
Sbjct: 82 VNQSAPLDYGNMAYKATQASYTPIRKLAPVSRALVNSSLCILQLGICCCFYIFV 135
>Z97191-2|CAB10025.1| 481|Caenorhabditis elegans Hypothetical
protein H32K16.1 protein.
Length = 481
Score = 57.6 bits (133), Expect = 8e-09
Identities = 35/159 (22%), Positives = 72/159 (45%)
Frame = +2
Query: 254 ESNTSSFGALAHLLKASLGSGVLAMPLAFKNAGLLVGCIGTMLIGLICGHVIHILVKTSQ 433
++ S+ L + + +G G ++ ++FK AGL G ++G + + +H +V SQ
Sbjct: 60 KTGISATSGLINFICGMIGPGCFSLAVSFKQAGLWGGLALVFIVGFLSLYSMHKIVNCSQ 119
Query: 434 QLCVEVKKPALGYADTCEIVFQNGPKPIRKFASIARELVDWSLAVTHMGACCVYVVVIAE 613
L +L Y + E QN K RK +A+ +++ L +G V++V E
Sbjct: 120 YLAKSNGDQSLDYGEMAEAAMQNSYKWARKHGKLAKIVINACLLAFQLGVITVFMVFAVE 179
Query: 614 SFRQVSVEYGGPDWSVTAYCALTLIVLIPLTQINKLKYL 730
++ E+ + C + L+ +P +N + ++
Sbjct: 180 HVIEI-WEFFADSPPPFSKCVMILMYFVPQMLLNFIGHM 217
>AL031630-22|CAA20995.2| 454|Caenorhabditis elegans Hypothetical
protein Y38H6C.17 protein.
Length = 454
Score = 47.2 bits (107), Expect = 1e-05
Identities = 28/125 (22%), Positives = 57/125 (45%)
Frame = +2
Query: 254 ESNTSSFGALAHLLKASLGSGVLAMPLAFKNAGLLVGCIGTMLIGLICGHVIHILVKTSQ 433
++ S+ L + + +G G ++ ++FK AGL G +IG + + +H +V SQ
Sbjct: 32 KTGISATSGLINFVCGMMGPGCFSLAVSFKQAGLWGGFASVFIIGGLSLYSMHKIVNCSQ 91
Query: 434 QLCVEVKKPALGYADTCEIVFQNGPKPIRKFASIARELVDWSLAVTHMGACCVYVVVIAE 613
L + L Y + + +N +K+ IA+ +V+ L +G V ++ E
Sbjct: 92 FLSEKKGDQKLDYGEMAKSAMENSYGWAKKYGKIAKVVVNTCLLAFQLGVITVSMIFAVE 151
Query: 614 SFRQV 628
++
Sbjct: 152 HIIEI 156
>Z68748-8|CAL36498.1| 583|Caenorhabditis elegans Hypothetical
protein F13H10.3c protein.
Length = 583
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/65 (30%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Frame = +2
Query: 305 LGSGVLAMPLAFKNAGLLVGCIGTMLIGLICGHVIHILVKTSQQLCVEVKKPALG-YADT 481
+G+ +LAMP A + AGL++G I + + IC + +I++++ ++L P L ++D
Sbjct: 145 MGTSLLAMPWALQQAGLVLGIIIMLSMAAICFYTAYIVIESPKRLQDLSVDPLLAEFSDV 204
Query: 482 CEIVF 496
C+ +F
Sbjct: 205 CKSLF 209
>Z68748-4|CAD27622.1| 617|Caenorhabditis elegans Hypothetical
protein F13H10.3b protein.
Length = 617
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/65 (30%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Frame = +2
Query: 305 LGSGVLAMPLAFKNAGLLVGCIGTMLIGLICGHVIHILVKTSQQLCVEVKKPALG-YADT 481
+G+ +LAMP A + AGL++G I + + IC + +I++++ ++L P L ++D
Sbjct: 179 MGTSLLAMPWALQQAGLVLGIIIMLSMAAICFYTAYIVIESPKRLQDLSVDPLLAEFSDV 238
Query: 482 CEIVF 496
C+ +F
Sbjct: 239 CKSLF 243
>Z68748-3|CAA92953.2| 615|Caenorhabditis elegans Hypothetical
protein F13H10.3a protein.
Length = 615
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/65 (30%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Frame = +2
Query: 305 LGSGVLAMPLAFKNAGLLVGCIGTMLIGLICGHVIHILVKTSQQLCVEVKKPALG-YADT 481
+G+ +LAMP A + AGL++G I + + IC + +I++++ ++L P L ++D
Sbjct: 177 MGTSLLAMPWALQQAGLVLGIIIMLSMAAICFYTAYIVIESPKRLQDLSVDPLLAEFSDV 236
Query: 482 CEIVF 496
C+ +F
Sbjct: 237 CKSLF 241
>AL034393-17|CAA22315.1| 503|Caenorhabditis elegans Hypothetical
protein Y18D10A.23 protein.
Length = 503
Score = 40.7 bits (91), Expect = 0.001
Identities = 26/105 (24%), Positives = 51/105 (48%)
Frame = +2
Query: 305 LGSGVLAMPLAFKNAGLLVGCIGTMLIGLICGHVIHILVKTSQQLCVEVKKPALGYADTC 484
+G+G++++PLA +GL+ GC+ +L + G+ L + + + + K Y C
Sbjct: 53 MGAGMISLPLALGRSGLIAGCVLILLASIFSGYTGIQLGENWEMMQIRWPK----YRTHC 108
Query: 485 EIVFQNGPKPIRKFASIARELVDWSLAVTHMGACCVYVVVIAESF 619
+ R + AR++V L V+ CV +++ AE+F
Sbjct: 109 RRPYPE--MAYRALGNWARQVVAVCLVVSQFLIACVLLLISAENF 151
>U23518-2|AAC70884.4| 496|Caenorhabditis elegans Hypothetical
protein F21D12.3 protein.
Length = 496
Score = 31.1 bits (67), Expect = 0.84
Identities = 21/102 (20%), Positives = 51/102 (50%), Gaps = 2/102 (1%)
Frame = +2
Query: 278 ALAHLLKASLGSGVLAMPLAFKNAGLLVGCIGTMLIGLICGHVIHILVKTSQQLCVEVKK 457
A ++ +G GV+AMP+AFK +GL +G + + + + + ++L K + + +
Sbjct: 49 AAIFIIADMVGGGVVAMPVAFKLSGLPMGILIMLTVAVSFEYTGYLLGKVWNK--IMERN 106
Query: 458 PALGYA--DTCEIVFQNGPKPIRKFASIARELVDWSLAVTHM 577
P +G E+ + +++F S+ + + ++V ++
Sbjct: 107 PHIGVCRKPFPEMAKRTMGTNMQRFTSVLGNVTQFGVSVVYL 148
>Z66511-4|CAA91316.1| 813|Caenorhabditis elegans Hypothetical
protein F07A11.3 protein.
Length = 813
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = +2
Query: 158 VMDDNYSSKIELAYNGSREDMGPYVPANHRPMESNTSSFGALAHLLKASLGSG 316
V+DD + IE Y + E +G +VP N + + N + HL+ S SG
Sbjct: 380 VIDDMLNDDIEDLYKFANETVGEFVP-NDKNCQVNMLALDIFFHLVAVSYASG 431
>Z82279-1|CAB05259.2| 321|Caenorhabditis elegans Hypothetical
protein R03C1.1 protein.
Length = 321
Score = 29.5 bits (63), Expect = 2.6
Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 10/107 (9%)
Frame = +2
Query: 353 LLVGCIGTMLIGLICGHVIHILVKTSQQLCVEVKKP--------ALGYADTCEIVFQNGP 508
L++ CIG +L+ I+V++ +Q C VK P A G AD +G
Sbjct: 8 LILVCIGALLVETFAAPDEPIIVRSKRQQCRCVKNPNGGLTCSCAKGPADGSSSSIGSGV 67
Query: 509 K-PIRKFASIARELVDWSLAVTHM-GACCVYVVVIAESFRQVSVEYG 643
+ + A IA +L S T M GA C + ++ + Q + + G
Sbjct: 68 QYDAPQSADIANQLTAMSQQTTGMSGARCGCIQIVIQGAPQYNCQCG 114
>U39742-9|AAK39194.1| 183|Caenorhabditis elegans Hypothetical
protein C25F6.1 protein.
Length = 183
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +1
Query: 46 KNKPQENIKIFGISNSFNLLLDIEDGEDEAISSSH 150
KNKP E ++ F I N++ ++E+G +IS+ H
Sbjct: 134 KNKPSELLRDFKIEALVNMVWNMEEGGSGSISTLH 168
>AF125971-5|AAD14765.1| 484|Caenorhabditis elegans Hypothetical
protein Y4C6B.2a protein.
Length = 484
Score = 29.5 bits (63), Expect = 2.6
Identities = 23/103 (22%), Positives = 44/103 (42%)
Frame = +2
Query: 308 GSGVLAMPLAFKNAGLLVGCIGTMLIGLICGHVIHILVKTSQQLCVEVKKPALGYADTCE 487
G G++A+P A + G + G ++ ++C + IL+ + + E+ Y D C
Sbjct: 26 GGGLIALPTAIVSTGAVTGAFLLLVAAVVCTYT-GILLAENWTILQELYPE---YRDHCR 81
Query: 488 IVFQNGPKPIRKFASIARELVDWSLAVTHMGACCVYVVVIAES 616
+ +R V L VT G V+V++ A++
Sbjct: 82 KPYP--AMGLRAIGPKFAHFVSAMLQVTQFGTAVVFVLLAAKN 122
>AC024842-7|AAF59620.1| 457|Caenorhabditis elegans Hypothetical
protein Y59H11AR.4 protein.
Length = 457
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/56 (28%), Positives = 31/56 (55%)
Frame = +2
Query: 251 MESNTSSFGALAHLLKASLGSGVLAMPLAFKNAGLLVGCIGTMLIGLICGHVIHIL 418
ME+ S + A+ + GSG++A+P A ++ G + G I +++ LI + +L
Sbjct: 1 MENGYSWYIAVIFTFGETAGSGLVALPSAMQSLGFMGGTITLIVMCLITYYTATLL 56
>AC103567-4|AAL35731.2| 598|Caenorhabditis elegans Hypothetical
protein Y51F10.4 protein.
Length = 598
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +2
Query: 287 HLLKASLGSGVLAMPLAFKNAGLLVGCIGTMLIGLICGHVIHIL 418
+L +G VLAMP F+ G+L+ I L ++ H L
Sbjct: 57 NLANCIIGVSVLAMPYVFQQCGILLAAIMIALCAVLTKLTCHFL 100
>AC006748-6|AAF60516.1| 582|Caenorhabditis elegans Hypothetical
protein Y39A3B.5a protein.
Length = 582
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +3
Query: 114 RRWRRRSHQLLPFNLLWTITTARKLSWLTMDREKTWA 224
R W+ RSH L+W I A + L M ++T++
Sbjct: 127 RIWQTRSHAYAMITLVWVIAIAANILMLFMYEQQTYS 163
>AC006748-5|AAX55685.1| 471|Caenorhabditis elegans Hypothetical
protein Y39A3B.5c protein.
Length = 471
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +3
Query: 114 RRWRRRSHQLLPFNLLWTITTARKLSWLTMDREKTWA 224
R W+ RSH L+W I A + L M ++T++
Sbjct: 127 RIWQTRSHAYAMITLVWVIAIAANILMLFMYEQQTYS 163
>Z68314-9|CAA92667.2| 2862|Caenorhabditis elegans Hypothetical protein
K08F8.6 protein.
Length = 2862
Score = 28.3 bits (60), Expect = 5.9
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +1
Query: 22 TIECKVPMKNKPQENIKIFGISNSFNLLLDIEDGEDEA 135
+I CK+P + +PQ ++I G+ N+ I D ++A
Sbjct: 2302 SIMCKIPYEKRPQLQLEIVGMEGMDNVAKPIPDYFNDA 2339
>Z66497-12|CAA91289.2| 2862|Caenorhabditis elegans Hypothetical
protein K08F8.6 protein.
Length = 2862
Score = 28.3 bits (60), Expect = 5.9
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +1
Query: 22 TIECKVPMKNKPQENIKIFGISNSFNLLLDIEDGEDEA 135
+I CK+P + +PQ ++I G+ N+ I D ++A
Sbjct: 2302 SIMCKIPYEKRPQLQLEIVGMEGMDNVAKPIPDYFNDA 2339
>AB223006-1|BAE16563.1| 2862|Caenorhabditis elegans Mediator complex
subunit Med13 protein.
Length = 2862
Score = 28.3 bits (60), Expect = 5.9
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +1
Query: 22 TIECKVPMKNKPQENIKIFGISNSFNLLLDIEDGEDEA 135
+I CK+P + +PQ ++I G+ N+ I D ++A
Sbjct: 2302 SIMCKIPYEKRPQLQLEIVGMEGMDNVAKPIPDYFNDA 2339
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,009,163
Number of Sequences: 27780
Number of extensions: 413615
Number of successful extensions: 1130
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1060
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1129
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1718929214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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