Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt9m01
         (674 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-611|AAF45929.2|  483|Drosophila melanogaster CG32774-PA...    33   0.36 
BT010037-1|AAQ22506.1|  409|Drosophila melanogaster LD43171p pro...    30   2.5  
AE014298-2534|AAN09435.1|  409|Drosophila melanogaster CG32564-P...    30   2.5  
BT023824-1|AAZ86745.1|  398|Drosophila melanogaster RE67564p pro...    29   4.4  
AY094834-1|AAM11187.1|  342|Drosophila melanogaster LD42296p pro...    29   5.8  
AE014297-1702|AAF54960.1|  146|Drosophila melanogaster CG9269-PA...    29   5.8  
AE013599-3979|AAF47289.2|  342|Drosophila melanogaster CG9083-PA...    29   5.8  
AE013599-1608|ABC66062.1| 1526|Drosophila melanogaster CG3845-PC...    29   5.8  
AB096103-1|BAD83642.1| 1526|Drosophila melanogaster hypothetical...    29   5.8  

>AE014298-611|AAF45929.2|  483|Drosophila melanogaster CG32774-PA
           protein.
          Length = 483

 Score = 33.1 bits (72), Expect = 0.36
 Identities = 24/99 (24%), Positives = 38/99 (38%), Gaps = 5/99 (5%)
 Frame = +2

Query: 284 TAARVSVTEIPV*VTATPVSVIRVKVIRAGLAVTMVVTKADIKAVIREASADFQGTRAME 463
           + A  S T  P   T+T  +     +++A    T+  T +         S     T   +
Sbjct: 184 STAAPSTTTTPPSTTSTTQAPTTTTLVQASTTTTLQPTTSTTPQSTSTTSTQAPTTTTTQ 243

Query: 464 GTDRDIRAAV-----PVTRATNLDTTNTDPVSTGTPRPT 565
            T    + +      P T  T + TT+T P +T TP PT
Sbjct: 244 STSTATQPSTTTPQSPPTTTTQVSTTSTQPTTTTTPLPT 282


>BT010037-1|AAQ22506.1|  409|Drosophila melanogaster LD43171p
           protein.
          Length = 409

 Score = 30.3 bits (65), Expect = 2.5
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +1

Query: 502 PGYKSGYNQYRSSFDRYPATNAGNFFGGYGDGYSDNFRVV 621
           P Y S Y    SS     ++  G++ GGYG GY    +V+
Sbjct: 79  PVYNSEYGSSSSSSASSSSSYGGSYGGGYGGGYGGGEQVI 118


>AE014298-2534|AAN09435.1|  409|Drosophila melanogaster CG32564-PA
           protein.
          Length = 409

 Score = 30.3 bits (65), Expect = 2.5
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +1

Query: 502 PGYKSGYNQYRSSFDRYPATNAGNFFGGYGDGYSDNFRVV 621
           P Y S Y    SS     ++  G++ GGYG GY    +V+
Sbjct: 79  PVYNSEYGSSSSSSASSSSSYGGSYGGGYGGGYGGGEQVI 118


>BT023824-1|AAZ86745.1|  398|Drosophila melanogaster RE67564p
           protein.
          Length = 398

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +2

Query: 464 GTDRDIRAAVPVTRATNLDTTNTDPVSTGTPRPT 565
           G++R  R  +P T   + D+T +DP   G PR T
Sbjct: 351 GSNRAARIKMPATEFISDDSTESDPSVVGIPRDT 384


>AY094834-1|AAM11187.1|  342|Drosophila melanogaster LD42296p
           protein.
          Length = 342

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
 Frame = +1

Query: 490 SAGYPGYKSGYNQYR--SSFDRYPATNAGNFFGGYGDGYS 603
           S GY G  SG + Y   SS+    + ++G +  G+G GYS
Sbjct: 250 SGGYDGGYSGGSSYSGASSYSSGSSYSSGGYSSGHGGGYS 289


>AE014297-1702|AAF54960.1|  146|Drosophila melanogaster CG9269-PA
           protein.
          Length = 146

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 14/35 (40%), Positives = 16/35 (45%)
 Frame = +1

Query: 496 GYPGYKSGYNQYRSSFDRYPATNAGNFFGGYGDGY 600
           GY GY SGY  +   +  Y         GGYG GY
Sbjct: 48  GYGGYGSGYGGFGGGYGGYGGYGGYGGLGGYG-GY 81


>AE013599-3979|AAF47289.2|  342|Drosophila melanogaster CG9083-PA
           protein.
          Length = 342

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
 Frame = +1

Query: 490 SAGYPGYKSGYNQYR--SSFDRYPATNAGNFFGGYGDGYS 603
           S GY G  SG + Y   SS+    + ++G +  G+G GYS
Sbjct: 250 SGGYDGGYSGGSSYSGASSYSSGSSYSSGGYSSGHGGGYS 289


>AE013599-1608|ABC66062.1| 1526|Drosophila melanogaster CG3845-PC,
           isoform C protein.
          Length = 1526

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 13/41 (31%), Positives = 18/41 (43%)
 Frame = +1

Query: 490 SAGYPGYKSGYNQYRSSFDRYPATNAGNFFGGYGDGYSDNF 612
           S+GY G  +     +SS+      N G    GY   Y DN+
Sbjct: 384 SSGYNGSAASSTNSKSSYGASRGGNDGGVSSGYSSNYRDNY 424


>AB096103-1|BAD83642.1| 1526|Drosophila melanogaster hypothetical
           protein protein.
          Length = 1526

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 13/41 (31%), Positives = 18/41 (43%)
 Frame = +1

Query: 490 SAGYPGYKSGYNQYRSSFDRYPATNAGNFFGGYGDGYSDNF 612
           S+GY G  +     +SS+      N G    GY   Y DN+
Sbjct: 384 SSGYNGSAASSTNSKSSYGASRGGNDGGVSSGYSSNYRDNY 424


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,578,085
Number of Sequences: 53049
Number of extensions: 316044
Number of successful extensions: 1260
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1143
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1250
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2930645700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)