Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt9l12
(683 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000263-3|AAL77185.1| 697|Caenorhabditis elegans Hypothetical ... 169 2e-42
AF000263-2|AAK21464.1| 755|Caenorhabditis elegans Hypothetical ... 169 2e-42
AF000263-1|AAK21462.1| 781|Caenorhabditis elegans Hypothetical ... 169 2e-42
Z81043-1|CAB02799.1| 755|Caenorhabditis elegans Hypothetical pr... 157 5e-39
Z27079-6|CAA81594.1| 288|Caenorhabditis elegans Hypothetical pr... 82 4e-16
AF045646-15|AAK29838.1| 284|Caenorhabditis elegans Enoyl-coa hy... 80 1e-15
AL132876-4|CAC48118.1| 256|Caenorhabditis elegans Hypothetical ... 72 3e-13
U53339-3|AAA96199.1| 278|Caenorhabditis elegans Hypothetical pr... 65 4e-11
U50307-3|AAA92304.1| 258|Caenorhabditis elegans Enoyl-coa hydra... 56 2e-08
U00050-8|AAM22062.1| 363|Caenorhabditis elegans Hypothetical pr... 53 2e-07
U00050-7|AAA50696.1| 386|Caenorhabditis elegans Hypothetical pr... 53 2e-07
AF125459-14|AAD12843.1| 297|Caenorhabditis elegans Hypothetical... 52 3e-07
U88308-10|AAB42326.2| 268|Caenorhabditis elegans Hypothetical p... 51 9e-07
Z74030-16|CAI79165.1| 481|Caenorhabditis elegans Hypothetical p... 29 4.1
Z74030-7|CAA98447.2| 559|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z74030-6|CAA98444.2| 508|Caenorhabditis elegans Hypothetical pr... 29 4.1
U41554-3|AAA83298.2| 745|Caenorhabditis elegans Nematode astaci... 28 7.1
U80454-6|AAB37879.1| 786|Caenorhabditis elegans Hypothetical pr... 27 9.4
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 27 9.4
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 27 9.4
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 27 9.4
>AF000263-3|AAL77185.1| 697|Caenorhabditis elegans Hypothetical
protein T08B2.7c protein.
Length = 697
Score = 169 bits (410), Expect = 2e-42
Identities = 83/162 (51%), Positives = 110/162 (67%)
Frame = +2
Query: 191 AVPASQVHTKCKLVNGVYVVTLDSPNVKVNSLNTQVMEEVSNIVNEIETNSGIEAAVIIS 370
+ PA Q + + V VV +D PN K N LN + E+ +++++++ I++ V++S
Sbjct: 51 SAPAMQTTHRVEKQGDVAVVKIDLPNTKENVLNKALFAEMKATLDKLQSDESIKSIVVMS 110
Query: 371 GKPGCFIAGADISMIENCKTKEEVVSLSKRGHEIFRRIEQSRKPYIAAIQGSCLGGGLET 550
GKP F+AGADI MI+ T +LS+ G E F RIE+S+KP +AAI GSC+GGGLE
Sbjct: 111 GKPNSFVAGADIQMIKAEGTATATETLSREGQEQFFRIEKSQKPVVAAIMGSCMGGGLEL 170
Query: 551 ALACKYRIAVKDSKTGFGLPEVMLGLLPGGGGTQRLPALTSI 676
ALAC YRIAV D KT LPEVMLGLLPG GGTQRLP LT++
Sbjct: 171 ALACHYRIAVNDKKTLLSLPEVMLGLLPGAGGTQRLPKLTTV 212
>AF000263-2|AAK21464.1| 755|Caenorhabditis elegans Hypothetical
protein T08B2.7b protein.
Length = 755
Score = 169 bits (410), Expect = 2e-42
Identities = 83/162 (51%), Positives = 110/162 (67%)
Frame = +2
Query: 191 AVPASQVHTKCKLVNGVYVVTLDSPNVKVNSLNTQVMEEVSNIVNEIETNSGIEAAVIIS 370
+ PA Q + + V VV +D PN K N LN + E+ +++++++ I++ V++S
Sbjct: 25 SAPAMQTTHRVEKQGDVAVVKIDLPNTKENVLNKALFAEMKATLDKLQSDESIKSIVVMS 84
Query: 371 GKPGCFIAGADISMIENCKTKEEVVSLSKRGHEIFRRIEQSRKPYIAAIQGSCLGGGLET 550
GKP F+AGADI MI+ T +LS+ G E F RIE+S+KP +AAI GSC+GGGLE
Sbjct: 85 GKPNSFVAGADIQMIKAEGTATATETLSREGQEQFFRIEKSQKPVVAAIMGSCMGGGLEL 144
Query: 551 ALACKYRIAVKDSKTGFGLPEVMLGLLPGGGGTQRLPALTSI 676
ALAC YRIAV D KT LPEVMLGLLPG GGTQRLP LT++
Sbjct: 145 ALACHYRIAVNDKKTLLSLPEVMLGLLPGAGGTQRLPKLTTV 186
>AF000263-1|AAK21462.1| 781|Caenorhabditis elegans Hypothetical
protein T08B2.7a protein.
Length = 781
Score = 169 bits (410), Expect = 2e-42
Identities = 83/162 (51%), Positives = 110/162 (67%)
Frame = +2
Query: 191 AVPASQVHTKCKLVNGVYVVTLDSPNVKVNSLNTQVMEEVSNIVNEIETNSGIEAAVIIS 370
+ PA Q + + V VV +D PN K N LN + E+ +++++++ I++ V++S
Sbjct: 51 SAPAMQTTHRVEKQGDVAVVKIDLPNTKENVLNKALFAEMKATLDKLQSDESIKSIVVMS 110
Query: 371 GKPGCFIAGADISMIENCKTKEEVVSLSKRGHEIFRRIEQSRKPYIAAIQGSCLGGGLET 550
GKP F+AGADI MI+ T +LS+ G E F RIE+S+KP +AAI GSC+GGGLE
Sbjct: 111 GKPNSFVAGADIQMIKAEGTATATETLSREGQEQFFRIEKSQKPVVAAIMGSCMGGGLEL 170
Query: 551 ALACKYRIAVKDSKTGFGLPEVMLGLLPGGGGTQRLPALTSI 676
ALAC YRIAV D KT LPEVMLGLLPG GGTQRLP LT++
Sbjct: 171 ALACHYRIAVNDKKTLLSLPEVMLGLLPGAGGTQRLPKLTTV 212
>Z81043-1|CAB02799.1| 755|Caenorhabditis elegans Hypothetical
protein C29F3.1 protein.
Length = 755
Score = 157 bits (382), Expect = 5e-39
Identities = 78/183 (42%), Positives = 116/183 (63%), Gaps = 2/183 (1%)
Frame = +2
Query: 134 KILRSRKELFISGVHSRKYAVPASQVHT--KCKLVNGVYVVTLDSPNVKVNSLNTQVMEE 307
+++ +F + + R ++ A VH+ + + V V+ +D PN N LN + E
Sbjct: 4 RVVHRSSSVFRTNLSFRLFSQSAFAVHSTHRVEKQGDVAVMKIDLPNTTENVLNKALFAE 63
Query: 308 VSNIVNEIETNSGIEAAVIISGKPGCFIAGADISMIENCKTKEEVVSLSKRGHEIFRRIE 487
++ ++ ++++ ++A V++SGKP F+AGADI M + KT V +L + G + IE
Sbjct: 64 MNETLDRLQSDQSVKAIVVMSGKPNSFVAGADIQMFKAEKTAAGVSNLLREGQKQLLTIE 123
Query: 488 QSRKPYIAAIQGSCLGGGLETALACKYRIAVKDSKTGFGLPEVMLGLLPGGGGTQRLPAL 667
S+KP +AAI GSC+GGGLE ALAC YRIAV D KT GLPEV LG++PG GGTQRLP L
Sbjct: 124 LSQKPIVAAIMGSCMGGGLEIALACHYRIAVNDKKTLLGLPEVTLGIMPGDGGTQRLPKL 183
Query: 668 TSI 676
T++
Sbjct: 184 TTV 186
>Z27079-6|CAA81594.1| 288|Caenorhabditis elegans Hypothetical
protein T05G5.6 protein.
Length = 288
Score = 81.8 bits (193), Expect = 4e-16
Identities = 48/139 (34%), Positives = 75/139 (53%)
Frame = +2
Query: 239 VYVVTLDSPNVKVNSLNTQVMEEVSNIVNEIETNSGIEAAVIISGKPGCFIAGADISMIE 418
V ++ L+ P +N+L Q+M E+++ + ++T+ + A++I+G F AGADI +
Sbjct: 45 VALIKLNRPKA-LNALCAQLMTELADALEVLDTDKSV-GAIVITGSERAFAAGADIKEMT 102
Query: 419 NCKTKEEVVSLSKRGHEIFRRIEQSRKPYIAAIQGSCLGGGLETALACKYRIAVKDSKTG 598
N E + S + + +KP IAA+ G LGGG E A+ C I K
Sbjct: 103 N---NEFATTFSGSFLSNWTAVSDVKKPVIAAVNGFALGGGNELAMMCD--IIYAGEKAR 157
Query: 599 FGLPEVMLGLLPGGGGTQR 655
FG PE+ +G +PG GGTQR
Sbjct: 158 FGQPEINIGTIPGAGGTQR 176
>AF045646-15|AAK29838.1| 284|Caenorhabditis elegans Enoyl-coa
hydratase protein 5 protein.
Length = 284
Score = 80.2 bits (189), Expect = 1e-15
Identities = 46/147 (31%), Positives = 77/147 (52%)
Frame = +2
Query: 236 GVYVVTLDSPNVKVNSLNTQVMEEVSNIVNEIETNSGIEAAVIISGKPGCFIAGADISMI 415
G+ ++ ++ P K NSL M++ +++E++ + ++ S F +GAD+
Sbjct: 41 GITILNMNRP-AKKNSLGRVFMDQFREVLDELKYDPKTRVVILNSKCDNVFCSGADLKE- 98
Query: 416 ENCKTKEEVVSLSKRGHEIFRRIEQSRKPYIAAIQGSCLGGGLETALACKYRIAVKDSKT 595
+++E + F +E+ +P IAAI G LGGGLE ALAC R+A + +K
Sbjct: 99 RKTMSQQEATRFVNGLRDSFTDVERLPQPVIAAIDGFALGGGLELALACDIRVASQKAK- 157
Query: 596 GFGLPEVMLGLLPGGGGTQRLPALTSI 676
GL E L+PG GG+QRL + +
Sbjct: 158 -MGLVETKWALIPGAGGSQRLYRIVGV 183
>AL132876-4|CAC48118.1| 256|Caenorhabditis elegans Hypothetical
protein Y105E8A.4 protein.
Length = 256
Score = 72.1 bits (169), Expect = 3e-13
Identities = 48/146 (32%), Positives = 75/146 (51%), Gaps = 1/146 (0%)
Frame = +2
Query: 239 VYVVTLDSPNVKVNSLNTQVMEEVSNIVNEIETNSGIEAAVIISGKPGCFIAGADISMIE 418
V ++TL+ P+ +N+L ++M E+S + ++E + ++++G F AGADI +
Sbjct: 13 VALITLNRPSA-LNALCRELMLELSENLLKVEKDQSYHV-IVLTGSEKAFAAGADIKEM- 69
Query: 419 NCKTKEEVVSLSKRGHEI-FRRIEQSRKPYIAAIQGSCLGGGLETALACKYRIAVKDSKT 595
K E + + + + + KP IAA+ G LGGG E AL C I
Sbjct: 70 ---AKLEFADVFENDYFTNWDTLSHITKPVIAAVNGFALGGGTELALMCD--IVYAGENA 124
Query: 596 GFGLPEVMLGLLPGGGGTQRLPALTS 673
FG PE+ +G +PG GGTQR P S
Sbjct: 125 IFGQPEITIGTIPGLGGTQRWPRYVS 150
>U53339-3|AAA96199.1| 278|Caenorhabditis elegans Hypothetical
protein F58A6.1 protein.
Length = 278
Score = 65.3 bits (152), Expect = 4e-11
Identities = 48/153 (31%), Positives = 75/153 (49%), Gaps = 10/153 (6%)
Frame = +2
Query: 239 VYVVTLDSPNVKVNSLNTQVMEEVSNIVNEIETNSGIEAAVIISGKPGCFIAGADISMIE 418
VY V+L+ P+ K N+LN + +E+ + I+ + VI+ G+ F +G D+S +
Sbjct: 20 VYKVSLNRPS-KFNALNMVIWKEIGDCFQLIDEDPECRV-VILQGEGKHFCSGLDLSEV- 76
Query: 419 NCKTKEEVVSLSKRGHEIFRRI----------EQSRKPYIAAIQGSCLGGGLETALACKY 568
EE ++RG I R I ++ KP I A+ G CLG L+ A AC
Sbjct: 77 TFLNGEEADDSARRGRSILRTIKFMQKQFTYIDECSKPVILAMHGYCLGAALDIATACDV 136
Query: 569 RIAVKDSKTGFGLPEVMLGLLPGGGGTQRLPAL 667
R+A KD+ + EV +G+ G RLP +
Sbjct: 137 RVATKDAV--LSVKEVDIGMAADVGTLNRLPKI 167
>U50307-3|AAA92304.1| 258|Caenorhabditis elegans Enoyl-coa
hydratase protein 3 protein.
Length = 258
Score = 56.4 bits (130), Expect = 2e-08
Identities = 39/146 (26%), Positives = 72/146 (49%)
Frame = +2
Query: 239 VYVVTLDSPNVKVNSLNTQVMEEVSNIVNEIETNSGIEAAVIISGKPGCFIAGADISMIE 418
V+++ ++ N K N +N ++ + + +S ++ AV+ G+ G F AG D+ +
Sbjct: 15 VFLIGINRANKK-NCVNHATALQLIDAFEKFNEDSTMKTAVLY-GEGGTFCAGYDLESVS 72
Query: 419 NCKTKEEVVSLSKRGHEIFRRIEQSRKPYIAAIQGSCLGGGLETALACKYRIAVKDSKTG 598
+ +E + + I + +KP IAAI+G + GGLE +L R++ +K G
Sbjct: 73 KAEHQEVSEDFCDKYRYMGPSIMKIKKPLIAAIEGFAVAGGLELSLMADLRVSSPSAKFG 132
Query: 599 FGLPEVMLGLLPGGGGTQRLPALTSI 676
V + L+ GGT RLP + +
Sbjct: 133 VFCRRVGVPLI--DGGTVRLPRVIGL 156
>U00050-8|AAM22062.1| 363|Caenorhabditis elegans Hypothetical
protein F09F7.4b protein.
Length = 363
Score = 52.8 bits (121), Expect = 2e-07
Identities = 40/149 (26%), Positives = 70/149 (46%), Gaps = 8/149 (5%)
Frame = +2
Query: 245 VVTLDSPNVKVNSLNTQVMEEVSNIVNEIETNSGIEAAVIISGKPGCFIAGADI-SMIEN 421
VVTL+ P +N+LN +++ E + ++S ++ ++ F AG D+ +++ +
Sbjct: 23 VVTLNRPKA-LNALNLEMVREFYPKLQAWNSSSDVDLVILKGSGDKAFCAGGDVLAVVRS 81
Query: 422 CKTKEEVVSLSKRGHEIFRR-------IEQSRKPYIAAIQGSCLGGGLETALACKYRIAV 580
K E + + FR I K Y+ I G +GGG ++ ++R+A
Sbjct: 82 FKDSESGKECTMH-KDFFREEYILNHLIGTLNKQYVCLIDGIVMGGGCGLSVNGRFRVAT 140
Query: 581 KDSKTGFGLPEVMLGLLPGGGGTQRLPAL 667
+ KT +PE LGL P GG+ L L
Sbjct: 141 E--KTMLAMPETALGLFPDVGGSYFLSRL 167
>U00050-7|AAA50696.1| 386|Caenorhabditis elegans Hypothetical
protein F09F7.4a protein.
Length = 386
Score = 52.8 bits (121), Expect = 2e-07
Identities = 40/149 (26%), Positives = 70/149 (46%), Gaps = 8/149 (5%)
Frame = +2
Query: 245 VVTLDSPNVKVNSLNTQVMEEVSNIVNEIETNSGIEAAVIISGKPGCFIAGADI-SMIEN 421
VVTL+ P +N+LN +++ E + ++S ++ ++ F AG D+ +++ +
Sbjct: 46 VVTLNRPKA-LNALNLEMVREFYPKLQAWNSSSDVDLVILKGSGDKAFCAGGDVLAVVRS 104
Query: 422 CKTKEEVVSLSKRGHEIFRR-------IEQSRKPYIAAIQGSCLGGGLETALACKYRIAV 580
K E + + FR I K Y+ I G +GGG ++ ++R+A
Sbjct: 105 FKDSESGKECTMH-KDFFREEYILNHLIGTLNKQYVCLIDGIVMGGGCGLSVNGRFRVAT 163
Query: 581 KDSKTGFGLPEVMLGLLPGGGGTQRLPAL 667
+ KT +PE LGL P GG+ L L
Sbjct: 164 E--KTMLAMPETALGLFPDVGGSYFLSRL 190
>AF125459-14|AAD12843.1| 297|Caenorhabditis elegans Hypothetical
protein Y25C1A.13 protein.
Length = 297
Score = 52.4 bits (120), Expect = 3e-07
Identities = 40/153 (26%), Positives = 75/153 (49%), Gaps = 13/153 (8%)
Frame = +2
Query: 239 VYVVTLDSPNVKVNSLNTQVMEEVSNIVNEIETNSGIEAAVIISGKPGCFIAGADIS--M 412
VY V L+ P K+N+ + E ++ + + + +IISG+ F AG DI+ +
Sbjct: 36 VYNVKLNRP-AKLNTFTMDMWREFKKAIDSLADDPKCRS-IIISGEGKAFCAGIDIAHGL 93
Query: 413 IENCKT-KEEVVSLSKRGH----------EIFRRIEQSRKPYIAAIQGSCLGGGLETALA 559
+ + +++ + + ++G + + +E+ KP IA+I CLG G++ A
Sbjct: 94 SDILRIIQDDTIEVGRKGRLVRKFIGEIQDCYTALERCPKPIIASIHSHCLGAGIDLITA 153
Query: 560 CKYRIAVKDSKTGFGLPEVMLGLLPGGGGTQRL 658
C R+A +D+ F + EV +GL G R+
Sbjct: 154 CDIRVASQDAI--FSIREVDVGLAADIGTLNRI 184
>U88308-10|AAB42326.2| 268|Caenorhabditis elegans Hypothetical
protein C32E8.9 protein.
Length = 268
Score = 50.8 bits (116), Expect = 9e-07
Identities = 37/140 (26%), Positives = 64/140 (45%)
Frame = +2
Query: 248 VTLDSPNVKVNSLNTQVMEEVSNIVNEIETNSGIEAAVIISGKPGCFIAGADISMIENCK 427
V LD P K N L+ ++M++ + A +++SG F +GAD+ +I++
Sbjct: 38 VILDRPE-KNNCLSGEMMKQFGEHTELFSDDQN--AIIVVSGVGKSFCSGADLGLIKDIS 94
Query: 428 TKEEVVSLSKRGHEIFRRIEQSRKPYIAAIQGSCLGGGLETALACKYRIAVKDSKTGFGL 607
++ V + + I + S IA I G LGG E + RIA SK F
Sbjct: 95 DQKLGVQMFEYMSSILSLLHSSPAISIAKIHGHALGGATEICSSTDIRIAHSGSKIAFF- 153
Query: 608 PEVMLGLLPGGGGTQRLPAL 667
+ +G++P GG + + +
Sbjct: 154 -QSKMGIVPSWGGAEYMEGI 172
>Z74030-16|CAI79165.1| 481|Caenorhabditis elegans Hypothetical
protein D1054.9e protein.
Length = 481
Score = 28.7 bits (61), Expect = 4.1
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = +2
Query: 224 KLVNGVYVVTLDSPNVKVNSLNTQVMEEVSNIVNEIETNSGIEAAV 361
K +NGV + S N+ N NT+++ + ++V + + S EA +
Sbjct: 377 KAINGVSASGVSSSNLLTNEPNTELLAAIKDVVAKFKVASLDEAGI 422
>Z74030-7|CAA98447.2| 559|Caenorhabditis elegans Hypothetical
protein D1054.9b protein.
Length = 559
Score = 28.7 bits (61), Expect = 4.1
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = +2
Query: 224 KLVNGVYVVTLDSPNVKVNSLNTQVMEEVSNIVNEIETNSGIEAAV 361
K +NGV + S N+ N NT+++ + ++V + + S EA +
Sbjct: 404 KAINGVSASGVSSSNLLTNEPNTELLAAIKDVVAKFKVASLDEAGI 449
>Z74030-6|CAA98444.2| 508|Caenorhabditis elegans Hypothetical
protein D1054.9a protein.
Length = 508
Score = 28.7 bits (61), Expect = 4.1
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = +2
Query: 224 KLVNGVYVVTLDSPNVKVNSLNTQVMEEVSNIVNEIETNSGIEAAV 361
K +NGV + S N+ N NT+++ + ++V + + S EA +
Sbjct: 404 KAINGVSASGVSSSNLLTNEPNTELLAAIKDVVAKFKVASLDEAGI 449
>U41554-3|AAA83298.2| 745|Caenorhabditis elegans Nematode astacin
protease protein38 protein.
Length = 745
Score = 27.9 bits (59), Expect = 7.1
Identities = 15/51 (29%), Positives = 29/51 (56%)
Frame = -3
Query: 375 LPDIMTAASIPEFVSISFTMLLTSSITWVLSEFTLTFGESKVTT*TPLTNL 223
L + ++++ E ++S T T S TW+ +E + GE+++TT +P L
Sbjct: 549 LTPLTSSSTTTESTTVSST---TQSTTWLPTEPSFATGETEITTASPTITL 596
>U80454-6|AAB37879.1| 786|Caenorhabditis elegans Hypothetical
protein T16A1.2 protein.
Length = 786
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +2
Query: 248 VTLDSPNVKVNSLNTQVMEEVSNIVNEIETNSGI 349
V D PN+K NSL Q + + IV I +GI
Sbjct: 373 VNSDIPNLKYNSLLPQKLHLIGYIVQVINNKNGI 406
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 27.5 bits (58), Expect = 9.4
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -3
Query: 645 PPPPGKSPNMTSGSPNP 595
PPPPG P +T G P P
Sbjct: 729 PPPPGGLPPITGGPPPP 745
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 27.5 bits (58), Expect = 9.4
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -3
Query: 645 PPPPGKSPNMTSGSPNP 595
PPPPG P +T G P P
Sbjct: 729 PPPPGGLPPITGGPPPP 745
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 27.5 bits (58), Expect = 9.4
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -3
Query: 645 PPPPGKSPNMTSGSPNP 595
PPPPG P +T G P P
Sbjct: 312 PPPPGGLPPITGGPPPP 328
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,103,151
Number of Sequences: 27780
Number of extensions: 327370
Number of successful extensions: 1166
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1065
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1149
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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