Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt9k11
         (266 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058613-1|AAL13842.1|  423|Drosophila melanogaster LD30661p pro...    27   3.6  
AE014296-933|AAF50803.1|  423|Drosophila melanogaster CG10671-PA...    27   3.6  
AE014296-932|AAN12239.2|  480|Drosophila melanogaster CG10671-PB...    27   3.6  

>AY058613-1|AAL13842.1|  423|Drosophila melanogaster LD30661p
           protein.
          Length = 423

 Score = 27.1 bits (57), Expect = 3.6
 Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 3/51 (5%)
 Frame = +2

Query: 29  IFVTYPFDCIDHKEKLTHYFEDSVINVII-YSWCRSINRILS--GKLTYEG 172
           +   Y   C DHK  L H+F   VI     + W +  N + +  G+ T +G
Sbjct: 128 VLSAYTITCGDHKRMLRHHFPRIVIATFFWFFWTKLFNVVENSYGRCTTKG 178


>AE014296-933|AAF50803.1|  423|Drosophila melanogaster CG10671-PA,
           isoform A protein.
          Length = 423

 Score = 27.1 bits (57), Expect = 3.6
 Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 3/51 (5%)
 Frame = +2

Query: 29  IFVTYPFDCIDHKEKLTHYFEDSVINVII-YSWCRSINRILS--GKLTYEG 172
           +   Y   C DHK  L H+F   VI     + W +  N + +  G+ T +G
Sbjct: 128 VLSAYTITCGDHKRMLRHHFPRIVIATFFWFFWTKLFNVVENSYGRCTTKG 178


>AE014296-932|AAN12239.2|  480|Drosophila melanogaster CG10671-PB,
           isoform B protein.
          Length = 480

 Score = 27.1 bits (57), Expect = 3.6
 Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 3/51 (5%)
 Frame = +2

Query: 29  IFVTYPFDCIDHKEKLTHYFEDSVINVII-YSWCRSINRILS--GKLTYEG 172
           +   Y   C DHK  L H+F   VI     + W +  N + +  G+ T +G
Sbjct: 185 VLSAYTITCGDHKRMLRHHFPRIVIATFFWFFWTKLFNVVENSYGRCTTKG 235


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,774,165
Number of Sequences: 53049
Number of extensions: 121263
Number of successful extensions: 344
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 342
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 344
length of database: 24,988,368
effective HSP length: 67
effective length of database: 21,434,085
effective search space used: 450115785
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)