Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt9k11
(266 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z73899-2|CAA98074.1| 536|Caenorhabditis elegans Hypothetical pr... 30 0.26
AC006651-8|AAX22286.1| 716|Caenorhabditis elegans Hypothetical ... 29 0.60
AC006651-7|AAX22287.1| 786|Caenorhabditis elegans Hypothetical ... 29 0.60
AC006651-6|AAF39868.1| 833|Caenorhabditis elegans Hypothetical ... 29 0.60
Z81062-9|CAB02941.1| 312|Caenorhabditis elegans Hypothetical pr... 28 0.79
Z68882-16|CAE17745.1| 118|Caenorhabditis elegans Hypothetical p... 28 0.79
AL031632-4|CAA21007.1| 451|Caenorhabditis elegans Hypothetical ... 28 0.79
U64849-9|AAC48056.1| 405|Caenorhabditis elegans Hypothetical pr... 27 1.4
Z19152-11|CAA79540.2| 1003|Caenorhabditis elegans Hypothetical p... 27 1.8
Z19152-6|CAA79542.2| 774|Caenorhabditis elegans Hypothetical pr... 27 1.8
Z19152-5|CAA79541.1| 698|Caenorhabditis elegans Hypothetical pr... 27 1.8
AF241656-1|AAG36873.1| 698|Caenorhabditis elegans SR protein sp... 27 1.8
AF067217-2|AAF99977.1| 1887|Caenorhabditis elegans Heavy chain, ... 27 1.8
Z83112-1|CAB05538.1| 742|Caenorhabditis elegans Hypothetical pr... 27 2.4
Z73975-1|CAA98276.1| 282|Caenorhabditis elegans Hypothetical pr... 27 2.4
AF125964-3|ABA03110.1| 805|Caenorhabditis elegans Hypothetical ... 27 2.4
AF047655-2|ABD63245.1| 805|Caenorhabditis elegans Hypothetical ... 27 2.4
AF025465-10|AAB71023.1| 805|Caenorhabditis elegans Hypothetical... 27 2.4
AF016422-2|AAG24174.1| 805|Caenorhabditis elegans Hypothetical ... 27 2.4
AC024831-3|ABD63213.1| 805|Caenorhabditis elegans Hypothetical ... 27 2.4
AL132846-3|CAB60346.2| 1648|Caenorhabditis elegans Hypothetical ... 26 4.2
AF125971-5|AAD14765.1| 484|Caenorhabditis elegans Hypothetical ... 26 4.2
Z81558-1|CAB04539.1| 318|Caenorhabditis elegans Hypothetical pr... 25 5.6
AF482952-1|AAL89754.1| 668|Caenorhabditis elegans CUP-5L protein. 25 7.4
AF338583-1|AAK19624.1| 611|Caenorhabditis elegans CUP-5 protein. 25 7.4
AC006679-13|AAL38965.1| 644|Caenorhabditis elegans Coelomocyte ... 25 7.4
AC006679-12|AAM15596.1| 611|Caenorhabditis elegans Coelomocyte ... 25 7.4
AC006679-11|AAP82643.1| 668|Caenorhabditis elegans Coelomocyte ... 25 7.4
AC006679-10|AAP82642.1| 619|Caenorhabditis elegans Coelomocyte ... 25 7.4
Z68882-3|CAA93106.2| 568|Caenorhabditis elegans Hypothetical pr... 25 9.7
>Z73899-2|CAA98074.1| 536|Caenorhabditis elegans Hypothetical
protein ZK829.4 protein.
Length = 536
Score = 29.9 bits (64), Expect = 0.26
Identities = 11/52 (21%), Positives = 25/52 (48%)
Frame = +2
Query: 83 YFEDSVINVIIYSWCRSINRILSGKLTYEGDDEMKVLAQKYFNKNRHKKINK 238
Y + V + W +++N + G+LT++ D+E + ++ K + K
Sbjct: 410 YVNSGGVTVSYFEWLKNLNHVSYGRLTFKYDEEANKMLLASVQESLSKAVGK 461
>AC006651-8|AAX22286.1| 716|Caenorhabditis elegans Hypothetical
protein H06I04.3b protein.
Length = 716
Score = 28.7 bits (61), Expect = 0.60
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = +2
Query: 146 LSGKLTYEGDDEMKVLAQKYFNKNRHKKIN--K*TVSFEKKK 265
+SG ++ E DD+ +K+ KNR KK + TVSF+ K
Sbjct: 496 ISGLVSDEDDDDEMNAIEKHIGKNRSKKTENYENTVSFDDSK 537
>AC006651-7|AAX22287.1| 786|Caenorhabditis elegans Hypothetical
protein H06I04.3c protein.
Length = 786
Score = 28.7 bits (61), Expect = 0.60
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = +2
Query: 146 LSGKLTYEGDDEMKVLAQKYFNKNRHKKIN--K*TVSFEKKK 265
+SG ++ E DD+ +K+ KNR KK + TVSF+ K
Sbjct: 496 ISGLVSDEDDDDEMNAIEKHIGKNRSKKTENYENTVSFDDSK 537
>AC006651-6|AAF39868.1| 833|Caenorhabditis elegans Hypothetical
protein H06I04.3a protein.
Length = 833
Score = 28.7 bits (61), Expect = 0.60
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = +2
Query: 146 LSGKLTYEGDDEMKVLAQKYFNKNRHKKIN--K*TVSFEKKK 265
+SG ++ E DD+ +K+ KNR KK + TVSF+ K
Sbjct: 496 ISGLVSDEDDDDEMNAIEKHIGKNRSKKTENYENTVSFDDSK 537
>Z81062-9|CAB02941.1| 312|Caenorhabditis elegans Hypothetical
protein F15A4.9 protein.
Length = 312
Score = 28.3 bits (60), Expect = 0.79
Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 7/63 (11%)
Frame = +2
Query: 50 DCI--DHKEKLTHYFEDSVINVII-----YSWCRSINRILSGKLTYEGDDEMKVLAQKYF 208
DCI EKL HY D+V I+ +S CR+I + GK D+ KV YF
Sbjct: 8 DCIVLAEPEKL-HYPGDTVSGHIVLKFEKFSTCRAITLTVKGKAETGWDNVTKVGQWTYF 66
Query: 209 NKN 217
N++
Sbjct: 67 NES 69
>Z68882-16|CAE17745.1| 118|Caenorhabditis elegans Hypothetical
protein C47E12.13 protein.
Length = 118
Score = 28.3 bits (60), Expect = 0.79
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -3
Query: 258 FSNETVYLFIFLCRFLLKYF*AKTF 184
F +E VY F FL R+LL + KTF
Sbjct: 82 FGHENVYRFHFLPRYLLPFIPKKTF 106
>AL031632-4|CAA21007.1| 451|Caenorhabditis elegans Hypothetical
protein Y32B12B.5 protein.
Length = 451
Score = 28.3 bits (60), Expect = 0.79
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -2
Query: 97 TVFKIVCQFFFMVYTIERVCYKYITKHFYCF 5
T ++ CQF +V IE + + ITKH CF
Sbjct: 91 TTPRLHCQFSHVVPKIEYMFLRCITKHISCF 121
>U64849-9|AAC48056.1| 405|Caenorhabditis elegans Hypothetical
protein K04A8.10 protein.
Length = 405
Score = 27.5 bits (58), Expect = 1.4
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = -2
Query: 94 VFKIVCQFFFMVYTIERVCYKYITKHF 14
+F IVC F+VY + ++ +++I + F
Sbjct: 371 IFVIVCIILFVVYLVIKLLFRFIGRQF 397
>Z19152-11|CAA79540.2| 1003|Caenorhabditis elegans Hypothetical
protein B0464.5a protein.
Length = 1003
Score = 27.1 bits (57), Expect = 1.8
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +2
Query: 128 RSINRILSGKLTYEGDDEMKVLAQKYFNKNRHKKINK 238
R +N +SG D + +AQ+ KN+ KK+ K
Sbjct: 581 RKMNMKMSGSAVSTAPDHLVKMAQENMTKNKKKKMKK 617
>Z19152-6|CAA79542.2| 774|Caenorhabditis elegans Hypothetical
protein B0464.5c protein.
Length = 774
Score = 27.1 bits (57), Expect = 1.8
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +2
Query: 128 RSINRILSGKLTYEGDDEMKVLAQKYFNKNRHKKINK 238
R +N +SG D + +AQ+ KN+ KK+ K
Sbjct: 293 RKMNMKMSGSAVSTAPDHLVKMAQENMTKNKKKKMKK 329
>Z19152-5|CAA79541.1| 698|Caenorhabditis elegans Hypothetical
protein B0464.5b protein.
Length = 698
Score = 27.1 bits (57), Expect = 1.8
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +2
Query: 128 RSINRILSGKLTYEGDDEMKVLAQKYFNKNRHKKINK 238
R +N +SG D + +AQ+ KN+ KK+ K
Sbjct: 293 RKMNMKMSGSAVSTAPDHLVKMAQENMTKNKKKKMKK 329
>AF241656-1|AAG36873.1| 698|Caenorhabditis elegans SR protein
specfic kinase SPK-1 protein.
Length = 698
Score = 27.1 bits (57), Expect = 1.8
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +2
Query: 128 RSINRILSGKLTYEGDDEMKVLAQKYFNKNRHKKINK 238
R +N +SG D + +AQ+ KN+ KK+ K
Sbjct: 293 RKMNMKMSGSAVSTAPDHLVKMAQENMTKNKKKKMKK 329
>AF067217-2|AAF99977.1| 1887|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 7 protein.
Length = 1887
Score = 27.1 bits (57), Expect = 1.8
Identities = 14/60 (23%), Positives = 30/60 (50%)
Frame = +2
Query: 44 PFDCIDHKEKLTHYFEDSVINVIIYSWCRSINRILSGKLTYEGDDEMKVLAQKYFNKNRH 223
P+D + HK++ + + + +S ++ +I G + E D+++ + FNK RH
Sbjct: 1309 PWDLMPHKQRQS---SSPIPSTGTFSLTKTKQQIDPGNMLVESTDDLRQFSIFIFNKTRH 1365
>Z83112-1|CAB05538.1| 742|Caenorhabditis elegans Hypothetical
protein K02B7.1 protein.
Length = 742
Score = 26.6 bits (56), Expect = 2.4
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Frame = +2
Query: 14 KMFC---DIFVTYPF-DCIDHKEKLTHYFEDSVINVIIYSWCRSINRILSGKLTYEGDDE 181
+ FC D+F+ + D I + +DS + I Y+ R I G L E + +
Sbjct: 598 QQFCETGDVFLNVVYHDGIRYSNYCNKKTDDSNVTFIEYARVRFAKII--GMLLKENNTD 655
Query: 182 MKVLAQKYFNKNRH 223
++ + +KY N N H
Sbjct: 656 LRFILKKYCNTNDH 669
>Z73975-1|CAA98276.1| 282|Caenorhabditis elegans Hypothetical
protein T06E8.1 protein.
Length = 282
Score = 26.6 bits (56), Expect = 2.4
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -2
Query: 67 FMVYTIERVCYKYITKHFYCFT 2
F++Y I VC+ Y+ FY FT
Sbjct: 17 FILYNISTVCHYYMRISFYYFT 38
>AF125964-3|ABA03110.1| 805|Caenorhabditis elegans Hypothetical
protein W03G1.4 protein.
Length = 805
Score = 26.6 bits (56), Expect = 2.4
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Frame = +2
Query: 14 KMFC---DIFVTYPF-DCIDHKEKLTHYFEDSVINVIIYSWCRSINRILSGKLTYEGDDE 181
+ FC D+F+ + D I + +DS + I Y+ R I G L E + +
Sbjct: 661 QQFCETGDVFLNVVYHDGIRYSNYCNKKTDDSNVTFIEYARVRFAKII--GMLLKENNTD 718
Query: 182 MKVLAQKYFNKNRH 223
++ + +KY N N H
Sbjct: 719 LRFILKKYCNTNDH 732
>AF047655-2|ABD63245.1| 805|Caenorhabditis elegans Hypothetical
protein C17B7.7 protein.
Length = 805
Score = 26.6 bits (56), Expect = 2.4
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Frame = +2
Query: 14 KMFC---DIFVTYPF-DCIDHKEKLTHYFEDSVINVIIYSWCRSINRILSGKLTYEGDDE 181
+ FC D+F+ + D I + +DS + I Y+ R I G L E + +
Sbjct: 661 QQFCETGDVFLNVVYHDGIRYSNYCNKKTDDSNVTFIEYARVRFAKII--GMLLKENNTD 718
Query: 182 MKVLAQKYFNKNRH 223
++ + +KY N N H
Sbjct: 719 LRFILKKYCNTNDH 732
>AF025465-10|AAB71023.1| 805|Caenorhabditis elegans Hypothetical
protein K02E7.3 protein.
Length = 805
Score = 26.6 bits (56), Expect = 2.4
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Frame = +2
Query: 14 KMFC---DIFVTYPF-DCIDHKEKLTHYFEDSVINVIIYSWCRSINRILSGKLTYEGDDE 181
+ FC D+F+ + D I + +DS + I Y+ R I G L E + +
Sbjct: 661 QQFCETGDVFLNVVYHDGIRYSNYCNKKTDDSNVTFIEYARVRFAKII--GMLLKENNTD 718
Query: 182 MKVLAQKYFNKNRH 223
++ + +KY N N H
Sbjct: 719 LRFILKKYCNTNDH 732
>AF016422-2|AAG24174.1| 805|Caenorhabditis elegans Hypothetical
protein R09E12.6 protein.
Length = 805
Score = 26.6 bits (56), Expect = 2.4
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Frame = +2
Query: 14 KMFC---DIFVTYPF-DCIDHKEKLTHYFEDSVINVIIYSWCRSINRILSGKLTYEGDDE 181
+ FC D+F+ + D I + +DS + I Y+ R I G L E + +
Sbjct: 661 QQFCETGDVFLNVVYHDGIRYSNYCNKKTDDSNVTFIEYARVRFAKII--GMLLKENNTD 718
Query: 182 MKVLAQKYFNKNRH 223
++ + +KY N N H
Sbjct: 719 LRFILKKYCNTNDH 732
>AC024831-3|ABD63213.1| 805|Caenorhabditis elegans Hypothetical
protein Y55F3C.6 protein.
Length = 805
Score = 26.6 bits (56), Expect = 2.4
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Frame = +2
Query: 14 KMFC---DIFVTYPF-DCIDHKEKLTHYFEDSVINVIIYSWCRSINRILSGKLTYEGDDE 181
+ FC D+F+ + D I + +DS + I Y+ R I G L E + +
Sbjct: 661 QQFCETGDVFLNVVYHDGIRYSNYCNKKTDDSNVTFIEYARVRFAKII--GMLLKENNTD 718
Query: 182 MKVLAQKYFNKNRH 223
++ + +KY N N H
Sbjct: 719 LRFILKKYCNTNDH 732
>AL132846-3|CAB60346.2| 1648|Caenorhabditis elegans Hypothetical
protein Y43D4A.5 protein.
Length = 1648
Score = 25.8 bits (54), Expect = 4.2
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +3
Query: 18 CFVIYL*HTLSIV*TIKKN*HTILKTV 98
C ++ L HTL IV T KKN T++K++
Sbjct: 16 CKILNLEHTLLIVETAKKN--TVIKSI 40
>AF125971-5|AAD14765.1| 484|Caenorhabditis elegans Hypothetical
protein Y4C6B.2a protein.
Length = 484
Score = 25.8 bits (54), Expect = 4.2
Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 4/59 (6%)
Frame = +2
Query: 2 SKTIKMFCDIFVTYPFDC----IDHKEKLTHYFEDSVINVIIYSWCRSINRILSGKLTY 166
SKT+ F I +Y C I H K H+F S+I I + + +SG Y
Sbjct: 201 SKTLMSFGTIMFSYGGHCAFPTIQHDMKKPHHFSRSIIIAFIIIFIFYLPVSMSGYFVY 259
>Z81558-1|CAB04539.1| 318|Caenorhabditis elegans Hypothetical
protein F59D12.1 protein.
Length = 318
Score = 25.4 bits (53), Expect = 5.6
Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 6/48 (12%)
Frame = +2
Query: 11 IKMFCDIFVTYPFDCIDHKE---KLTHYFEDSVINV---IIYSWCRSI 136
I +FC T+ + CID K + Y E S+ I++SW S+
Sbjct: 98 IALFCSTVYTFAWICIDRYSAMMKPSRYSEQSLTRCKCWIVFSWLTSM 145
>AF482952-1|AAL89754.1| 668|Caenorhabditis elegans CUP-5L protein.
Length = 668
Score = 25.0 bits (52), Expect = 7.4
Identities = 9/17 (52%), Positives = 15/17 (88%)
Frame = -2
Query: 244 SLFIYFFVSIFIKILLS 194
+++IY FVS+FI ++LS
Sbjct: 527 TVYIYLFVSLFIYVVLS 543
>AF338583-1|AAK19624.1| 611|Caenorhabditis elegans CUP-5 protein.
Length = 611
Score = 25.0 bits (52), Expect = 7.4
Identities = 9/17 (52%), Positives = 15/17 (88%)
Frame = -2
Query: 244 SLFIYFFVSIFIKILLS 194
+++IY FVS+FI ++LS
Sbjct: 527 TVYIYLFVSLFIYVVLS 543
>AC006679-13|AAL38965.1| 644|Caenorhabditis elegans Coelomocyte
uptake defective protein5, isoform b protein.
Length = 644
Score = 25.0 bits (52), Expect = 7.4
Identities = 9/17 (52%), Positives = 15/17 (88%)
Frame = -2
Query: 244 SLFIYFFVSIFIKILLS 194
+++IY FVS+FI ++LS
Sbjct: 533 TVYIYLFVSLFIYVVLS 549
>AC006679-12|AAM15596.1| 611|Caenorhabditis elegans Coelomocyte
uptake defective protein5, isoform a protein.
Length = 611
Score = 25.0 bits (52), Expect = 7.4
Identities = 9/17 (52%), Positives = 15/17 (88%)
Frame = -2
Query: 244 SLFIYFFVSIFIKILLS 194
+++IY FVS+FI ++LS
Sbjct: 527 TVYIYLFVSLFIYVVLS 543
>AC006679-11|AAP82643.1| 668|Caenorhabditis elegans Coelomocyte
uptake defective protein5, isoform d protein.
Length = 668
Score = 25.0 bits (52), Expect = 7.4
Identities = 9/17 (52%), Positives = 15/17 (88%)
Frame = -2
Query: 244 SLFIYFFVSIFIKILLS 194
+++IY FVS+FI ++LS
Sbjct: 527 TVYIYLFVSLFIYVVLS 543
>AC006679-10|AAP82642.1| 619|Caenorhabditis elegans Coelomocyte
uptake defective protein5, isoform c protein.
Length = 619
Score = 25.0 bits (52), Expect = 7.4
Identities = 9/17 (52%), Positives = 15/17 (88%)
Frame = -2
Query: 244 SLFIYFFVSIFIKILLS 194
+++IY FVS+FI ++LS
Sbjct: 535 TVYIYLFVSLFIYVVLS 551
>Z68882-3|CAA93106.2| 568|Caenorhabditis elegans Hypothetical
protein C47E12.3 protein.
Length = 568
Score = 24.6 bits (51), Expect = 9.7
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -1
Query: 266 FFFSQTKQFIYLFFCVD 216
FF S+T +++YL F VD
Sbjct: 466 FFLSETLKYLYLLFDVD 482
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,063,826
Number of Sequences: 27780
Number of extensions: 78542
Number of successful extensions: 334
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 321
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 334
length of database: 12,740,198
effective HSP length: 67
effective length of database: 10,878,938
effective search space used: 228457698
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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