Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt9k09
(651 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene... 59 2e-09
U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprote... 59 2e-09
Z82266-4|CAB05180.1| 227|Caenorhabditis elegans Hypothetical pr... 55 4e-08
Z68507-6|CAA92829.1| 240|Caenorhabditis elegans Hypothetical pr... 55 4e-08
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 53 2e-07
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 53 2e-07
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 52 4e-07
Z68213-3|CAA92438.1| 223|Caenorhabditis elegans Hypothetical pr... 52 5e-07
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 50 1e-06
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 50 1e-06
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 49 3e-06
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 49 3e-06
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 49 3e-06
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 48 6e-06
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 48 6e-06
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 48 6e-06
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 48 8e-06
AF038605-5|AAB92019.1| 211|Caenorhabditis elegans Hypothetical ... 47 1e-05
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 47 1e-05
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 46 3e-05
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 45 4e-05
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 44 1e-04
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 44 1e-04
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 42 4e-04
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 42 4e-04
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 42 4e-04
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 42 4e-04
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 42 4e-04
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 42 4e-04
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 42 4e-04
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 42 4e-04
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 42 4e-04
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 40 0.001
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 40 0.001
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 40 0.001
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 40 0.001
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 40 0.001
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 38 0.005
Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical pr... 38 0.008
Z81038-2|CAB02757.1| 454|Caenorhabditis elegans Hypothetical pr... 38 0.008
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 38 0.008
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 38 0.008
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 37 0.011
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 37 0.011
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 37 0.011
U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical pr... 37 0.014
AF043700-5|AAB97575.2| 573|Caenorhabditis elegans Lipid deplete... 36 0.019
AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical ... 35 0.044
Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical pr... 35 0.058
U55857-7|AAA98033.1| 217|Caenorhabditis elegans Rnp (rrm rna bi... 35 0.058
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 34 0.076
AF125462-1|AAD12858.2| 244|Caenorhabditis elegans Hypothetical ... 34 0.076
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 33 0.13
Z81525-8|CAB04257.1| 208|Caenorhabditis elegans Hypothetical pr... 33 0.13
Z78013-8|CAN99686.1| 373|Caenorhabditis elegans Hypothetical pr... 33 0.13
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 33 0.13
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 33 0.13
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 33 0.13
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 33 0.13
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 33 0.18
Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical pr... 33 0.23
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 33 0.23
AF016672-7|AAB66119.1| 378|Caenorhabditis elegans Vig (drosophi... 33 0.23
Z68302-2|CAA92631.1| 630|Caenorhabditis elegans Hypothetical pr... 32 0.31
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 32 0.31
U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical p... 32 0.31
AF106574-2|AAM81088.1| 315|Caenorhabditis elegans Hypothetical ... 32 0.31
AF106574-1|AAY44015.1| 317|Caenorhabditis elegans Hypothetical ... 32 0.31
Z70783-9|CAA94857.2| 455|Caenorhabditis elegans Hypothetical pr... 32 0.41
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 32 0.41
AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein... 32 0.41
AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein... 32 0.41
AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization... 32 0.41
AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization... 32 0.41
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 31 0.54
L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family ... 31 0.54
L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family ... 31 0.54
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 31 0.54
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 31 0.54
AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical... 31 0.54
AF003140-8|AAB54169.1| 396|Caenorhabditis elegans Hypothetical ... 31 0.54
Z66500-14|CAA91313.2| 1169|Caenorhabditis elegans Hypothetical p... 31 0.71
Z49968-13|CAA90265.2| 1169|Caenorhabditis elegans Hypothetical p... 31 0.71
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 31 0.94
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 0.94
U52003-5|AAG00057.1| 730|Caenorhabditis elegans P granule abnor... 31 0.94
U52003-4|ABB51171.1| 771|Caenorhabditis elegans P granule abnor... 31 0.94
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 0.94
L25598-2|AAV58887.1| 780|Caenorhabditis elegans Calpain family ... 31 0.94
AF098992-4|AAK73869.2| 250|Caenorhabditis elegans Hypothetical ... 31 0.94
AF077868-1|AAC36100.1| 730|Caenorhabditis elegans PGL-1 protein. 31 0.94
U55857-6|AAA98032.2| 206|Caenorhabditis elegans Rnp (rrm rna bi... 30 1.2
AL021173-1|CAE17951.1| 89|Caenorhabditis elegans Hypothetical ... 30 1.2
Z78413-7|CAB01657.1| 352|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z75552-4|CAA99942.1| 624|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z69787-12|CAM84810.1| 234|Caenorhabditis elegans Hypothetical p... 30 1.6
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z11505-10|CAA77588.2| 590|Caenorhabditis elegans Hypothetical p... 30 1.6
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 30 1.6
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 30 1.6
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 30 1.6
AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical... 30 1.6
Z95559-4|CAB09004.1| 110|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z81463-1|CAB03850.1| 342|Caenorhabditis elegans Hypothetical pr... 29 2.2
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 29 2.2
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 29 2.2
U39645-2|AAA80365.2| 638|Caenorhabditis elegans Hypothetical pr... 29 2.2
AF078786-2|AAC26941.1| 889|Caenorhabditis elegans Hypothetical ... 29 2.2
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 29 2.2
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 29 2.2
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 29 2.2
Z50071-4|CAA90409.2| 1301|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z34533-2|CAA84296.1| 166|Caenorhabditis elegans Hypothetical pr... 29 3.8
AF067211-9|AAC16994.1| 120|Caenorhabditis elegans Hypothetical ... 29 3.8
AC006605-3|AAK85442.1| 933|Caenorhabditis elegans Hypothetical ... 29 3.8
Z99278-4|CAB16492.1| 871|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z99278-3|CAB16493.1| 867|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z46787-3|CAA86741.1| 1032|Caenorhabditis elegans Hypothetical pr... 28 5.0
U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical pr... 28 5.0
U20864-9|AAC46661.1| 123|Caenorhabditis elegans Lsm sm-like pro... 28 5.0
AL110490-3|CAB54449.1| 892|Caenorhabditis elegans Hypothetical ... 28 5.0
AL110485-18|CAB60366.1| 108|Caenorhabditis elegans Hypothetical... 28 5.0
Z69302-6|CAL36504.1| 472|Caenorhabditis elegans Hypothetical pr... 28 6.6
U23484-7|ABB88232.1| 738|Caenorhabditis elegans Hypothetical pr... 28 6.6
AL161712-14|CAC35895.1| 286|Caenorhabditis elegans Hypothetical... 28 6.6
AF104858-1|AAC79090.1| 390|Caenorhabditis elegans putative RNA-... 28 6.6
AF063007-5|AAD47125.1| 712|Caenorhabditis elegans Prion-like-(q... 28 6.6
AF067611-1|AAC19182.1| 603|Caenorhabditis elegans Hypothetical ... 27 8.7
AF022982-4|AAB69938.1| 296|Caenorhabditis elegans Dnaj domain (... 27 8.7
>U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene on
x protein 1 protein.
Length = 415
Score = 59.3 bits (137), Expect = 2e-09
Identities = 27/84 (32%), Positives = 49/84 (58%)
Frame = +3
Query: 396 GPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAM 575
GP +L VSN+ F D D+K +F +FG++ + ++ G S G V ER DA +A
Sbjct: 151 GPKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERG-SKGFGFVTMERPQDAERAR 209
Query: 576 KQYNGVPLDGRAMNIQLATSEINT 647
++ +G ++GR + + AT+ +++
Sbjct: 210 QELHGSMIEGRKIEVNCATARVHS 233
>U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprotein
protein.
Length = 415
Score = 59.3 bits (137), Expect = 2e-09
Identities = 27/84 (32%), Positives = 49/84 (58%)
Frame = +3
Query: 396 GPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAM 575
GP +L VSN+ F D D+K +F +FG++ + ++ G S G V ER DA +A
Sbjct: 151 GPKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERG-SKGFGFVTMERPQDAERAR 209
Query: 576 KQYNGVPLDGRAMNIQLATSEINT 647
++ +G ++GR + + AT+ +++
Sbjct: 210 QELHGSMIEGRKIEVNCATARVHS 233
>Z82266-4|CAB05180.1| 227|Caenorhabditis elegans Hypothetical
protein F23B2.6 protein.
Length = 227
Score = 55.2 bits (127), Expect = 4e-08
Identities = 49/175 (28%), Positives = 79/175 (45%), Gaps = 2/175 (1%)
Frame = +3
Query: 117 IEMALDDIIKANKKTR--IGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITK 290
I+M+L DII N+K + + + ++ G G +SGG RG R G T
Sbjct: 7 IDMSLSDIISTNRKNKKVVKKPIKKSAGGIRKRGNASNVGTPRRQSGGTSRGGGRMGNT- 65
Query: 291 STNYSRGDVNSTWKHDMFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSE 470
S G ++ K N +SNL V SD++ELF
Sbjct: 66 -VRRSAGGSSNDNKQVRIN----------------------ISNLAETVISSDLQELFGA 102
Query: 471 FGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQYNGVPLDGRAMNIQLATS 635
F + K SV+++ +G + GT D+ +K DA + ++++ GV LDG+ M+ + S
Sbjct: 103 FNLHK-VSVNFNENGGAAGTGDITL-KKYDADRLIQKFAGVALDGKVMHFAVIES 155
>Z68507-6|CAA92829.1| 240|Caenorhabditis elegans Hypothetical
protein M18.7a protein.
Length = 240
Score = 55.2 bits (127), Expect = 4e-08
Identities = 43/131 (32%), Positives = 68/131 (51%), Gaps = 2/131 (1%)
Frame = +3
Query: 249 GGVQRGRNRG-GITKSTNYSRGDVNSTWKH-DMFNDFGERKLQRNSGTITTGPTKLLVSN 422
GG +RG R G+ + + S G WK D + G +S I ++ +SN
Sbjct: 31 GGARRGNTRPTGLPRRSGGSGG-----WKDLDAVQNHGISSRGNDSKVI-----RVNISN 80
Query: 423 LDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQYNGVPLD 602
L V SD++ELF ++ L S SV+++ G SLGT D+ K DA + +++++GV LD
Sbjct: 81 LAPTVISSDLEELFGDYR-LSSVSVNFNEHGDSLGTGDISL-TKRDAERLVQKFSGVALD 138
Query: 603 GRAMNIQLATS 635
G+ M + S
Sbjct: 139 GKIMKFAVIDS 149
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 53.2 bits (122), Expect = 2e-07
Identities = 26/89 (29%), Positives = 47/89 (52%)
Frame = +3
Query: 378 SGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKA 557
S + T GP +L VSN+ F + D+ +F + G + + ++ G S G V +
Sbjct: 92 SSSSTDGPRRLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERG-SKGFGFVTMQNPD 150
Query: 558 DAVKAMKQYNGVPLDGRAMNIQLATSEIN 644
DA +A ++NG ++GR + + LAT ++
Sbjct: 151 DADRARAEFNGTTIEGRRVEVNLATQRVH 179
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 53.2 bits (122), Expect = 2e-07
Identities = 26/89 (29%), Positives = 47/89 (52%)
Frame = +3
Query: 378 SGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKA 557
S + T GP +L VSN+ F + D+ +F + G + + ++ G S G V +
Sbjct: 92 SSSSTDGPRRLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERG-SKGFGFVTMQNPD 150
Query: 558 DAVKAMKQYNGVPLDGRAMNIQLATSEIN 644
DA +A ++NG ++GR + + LAT ++
Sbjct: 151 DADRARAEFNGTTIEGRRVEVNLATQRVH 179
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 52.0 bits (119), Expect = 4e-07
Identities = 28/78 (35%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Frame = +3
Query: 414 VSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAMKQYNG 590
V N F ++ D+ FS+ G + + + DR +GR G A V F +A A +A+ Q+NG
Sbjct: 8 VGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQRAVDQFNG 67
Query: 591 VPLDGRAMNIQLATSEIN 644
V +GRA+ + LA + N
Sbjct: 68 VDFNGRALRVNLAQNRNN 85
>Z68213-3|CAA92438.1| 223|Caenorhabditis elegans Hypothetical
protein C01F6.5 protein.
Length = 223
Score = 51.6 bits (118), Expect = 5e-07
Identities = 36/138 (26%), Positives = 67/138 (48%), Gaps = 1/138 (0%)
Frame = +3
Query: 225 AGFRSNRSGGVQRGRNRGGITKS-TNYSRGDVNSTWKHDMFNDFGERKLQRNSGTITTGP 401
AG R + ++R + GG+ K + + G G R + R+
Sbjct: 13 AGIRRTKKSPIKRA-SVGGVKKRFSTGTAGPSRRPTAQPRRQSGGIRTVDRSIPANENRE 71
Query: 402 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 581
++ +SNL V D+++LF+EF I ++ SV+++ G+ +GT DV K A + +++
Sbjct: 72 VRINLSNLAHTVHSGDLRQLFAEFKI-RNVSVNFNEHGKPVGTGDVTLP-KRHADRLIQK 129
Query: 582 YNGVPLDGRAMNIQLATS 635
+ GV LDG+ + + S
Sbjct: 130 FAGVSLDGKEIKFAIIDS 147
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 50.0 bits (114), Expect = 1e-06
Identities = 23/77 (29%), Positives = 40/77 (51%)
Frame = +3
Query: 396 GPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAM 575
GPT +LV NL + + I+++F FG ++ + D + + G A + F DA K+
Sbjct: 125 GPTHVLVENLHPKIDEKMIRDIFESFGRIEKIDLEVDSNRENRGFATITFRNADDAQKSC 184
Query: 576 KQYNGVPLDGRAMNIQL 626
+Q N L GR + + +
Sbjct: 185 EQLNNFELAGRCIRLSI 201
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 50.0 bits (114), Expect = 1e-06
Identities = 23/77 (29%), Positives = 40/77 (51%)
Frame = +3
Query: 396 GPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAM 575
GPT +LV NL + + I+++F FG ++ + D + + G A + F DA K+
Sbjct: 270 GPTHVLVENLHPKIDEKMIRDIFESFGRIEKIDLEVDSNRENRGFATITFRNADDAQKSC 329
Query: 576 KQYNGVPLDGRAMNIQL 626
+Q N L GR + + +
Sbjct: 330 EQLNNFELAGRCIRLSI 346
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 48.8 bits (111), Expect = 3e-06
Identities = 24/74 (32%), Positives = 40/74 (54%)
Frame = +3
Query: 408 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQYN 587
L V N++ ++D +++ FS FG + SA V D +GRS G V FE+ +A A+ N
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDENGRSKGFGFVCFEKPEEATAAVTDMN 404
Query: 588 GVPLDGRAMNIQLA 629
+ + + + LA
Sbjct: 405 SKMIGAKPLYVALA 418
Score = 37.9 bits (84), Expect = 0.006
Identities = 28/78 (35%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Frame = +3
Query: 390 TTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGR-SLGTADVVFERKADAV 566
T L + +L VS++ + E FS G + S V D + R SLG A V F++ ADA
Sbjct: 53 TYSMASLYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAE 112
Query: 567 KAMKQYNGVPLDGRAMNI 620
+A+ N + GR M I
Sbjct: 113 RALDTMNFEVIHGRPMRI 130
Score = 34.7 bits (76), Expect = 0.058
Identities = 20/79 (25%), Positives = 37/79 (46%)
Frame = +3
Query: 402 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 581
T + V N + + +FS+FG + SA V D G+ G V F + A +A+++
Sbjct: 238 TNVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQGKPKGFGFVAFADQDAAGQAVEK 297
Query: 582 YNGVPLDGRAMNIQLATSE 638
N L+G + + ++
Sbjct: 298 LNDSILEGTDCKLSVCRAQ 316
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 48.8 bits (111), Expect = 3e-06
Identities = 24/74 (32%), Positives = 40/74 (54%)
Frame = +3
Query: 408 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQYN 587
L V N++ ++D +++ FS FG + SA V D +GRS G V FE+ +A A+ N
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDENGRSKGFGFVCFEKPEEATAAVTDMN 404
Query: 588 GVPLDGRAMNIQLA 629
+ + + + LA
Sbjct: 405 SKMIGAKPLYVALA 418
Score = 37.9 bits (84), Expect = 0.006
Identities = 28/78 (35%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Frame = +3
Query: 390 TTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGR-SLGTADVVFERKADAV 566
T L + +L VS++ + E FS G + S V D + R SLG A V F++ ADA
Sbjct: 53 TYSMASLYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAE 112
Query: 567 KAMKQYNGVPLDGRAMNI 620
+A+ N + GR M I
Sbjct: 113 RALDTMNFEVIHGRPMRI 130
Score = 34.7 bits (76), Expect = 0.058
Identities = 20/79 (25%), Positives = 37/79 (46%)
Frame = +3
Query: 402 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 581
T + V N + + +FS+FG + SA V D G+ G V F + A +A+++
Sbjct: 238 TNVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQGKPKGFGFVAFADQDAAGQAVEK 297
Query: 582 YNGVPLDGRAMNIQLATSE 638
N L+G + + ++
Sbjct: 298 LNDSILEGTDCKLSVCRAQ 316
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 48.8 bits (111), Expect = 3e-06
Identities = 22/77 (28%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Frame = +3
Query: 402 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAMK 578
T L+++ L G++ +++ LF+ G ++S + D+ +G+SLG V + R+ DA++A+
Sbjct: 42 TNLIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALRAVS 101
Query: 579 QYNGVPLDGRAMNIQLA 629
+NG+ L + + + A
Sbjct: 102 SFNGLRLQNKTIKVSYA 118
Score = 39.1 bits (87), Expect = 0.003
Identities = 22/76 (28%), Positives = 36/76 (47%)
Frame = +3
Query: 408 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQYN 587
L V NL D+ + +LFS+FG + + + D + + G A V +A AM N
Sbjct: 376 LFVYNLSSDTDDTLLWQLFSQFGAIVNVKILRDLTQQCKGYAFVSMSNYTEAYNAMLSLN 435
Query: 588 GVPLDGRAMNIQLATS 635
G L G+ + + +S
Sbjct: 436 GTNLAGKTLQVVFKSS 451
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 48.0 bits (109), Expect = 6e-06
Identities = 25/74 (33%), Positives = 39/74 (52%)
Frame = +3
Query: 408 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQYN 587
L V NLD V D +K+ F +G + SA V D +GRS G V FE+ +A A+ + N
Sbjct: 259 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAVTEMN 318
Query: 588 GVPLDGRAMNIQLA 629
+ + + + +A
Sbjct: 319 SKMVCSKPLYVAIA 332
Score = 39.1 bits (87), Expect = 0.003
Identities = 32/85 (37%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Frame = +3
Query: 369 QRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGR-SLGTADVVF 545
Q +G+ T L V +L V++S + E FS G + S V D + R SLG A V F
Sbjct: 22 QNQTGSSYT-MASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNF 80
Query: 546 ERKADAVKAMKQYNGVPLDGRAMNI 620
++ ADA +AM N L G+ M I
Sbjct: 81 QQPADAERAMDTMNFEALHGKPMRI 105
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 48.0 bits (109), Expect = 6e-06
Identities = 25/74 (33%), Positives = 39/74 (52%)
Frame = +3
Query: 408 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQYN 587
L V NLD V D +K+ F +G + SA V D +GRS G V FE+ +A A+ + N
Sbjct: 256 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAVTEMN 315
Query: 588 GVPLDGRAMNIQLA 629
+ + + + +A
Sbjct: 316 SKMVCSKPLYVAIA 329
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 48.0 bits (109), Expect = 6e-06
Identities = 25/74 (33%), Positives = 39/74 (52%)
Frame = +3
Query: 408 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQYN 587
L V NLD V D +K+ F +G + SA V D +GRS G V FE+ +A A+ + N
Sbjct: 319 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAVTEMN 378
Query: 588 GVPLDGRAMNIQLA 629
+ + + + +A
Sbjct: 379 SKMVCSKPLYVAIA 392
Score = 39.1 bits (87), Expect = 0.003
Identities = 32/85 (37%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Frame = +3
Query: 369 QRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGR-SLGTADVVF 545
Q +G+ T L V +L V++S + E FS G + S V D + R SLG A V F
Sbjct: 22 QNQTGSSYT-MASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNF 80
Query: 546 ERKADAVKAMKQYNGVPLDGRAMNI 620
++ ADA +AM N L G+ M I
Sbjct: 81 QQPADAERAMDTMNFEALHGKPMRI 105
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 47.6 bits (108), Expect = 8e-06
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Frame = +3
Query: 381 GTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKA 557
G+ T TK+ V L + SD + E F +FG ++ A V DR + +S G V + +A
Sbjct: 28 GSRDTMFTKIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRA 87
Query: 558 DAVKAMKQYNGVPLDGRAMNIQLA 629
A +A K N + +DGR N+ LA
Sbjct: 88 SAERACKDPNPI-IDGRKANVNLA 110
>AF038605-5|AAB92019.1| 211|Caenorhabditis elegans Hypothetical
protein C02B10.4 protein.
Length = 211
Score = 47.2 bits (107), Expect = 1e-05
Identities = 26/78 (33%), Positives = 42/78 (53%)
Frame = +3
Query: 387 ITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAV 566
I TGP+ L++ NL V+ D++ELF ++ + +HY +G S G AD++ A+
Sbjct: 88 IHTGPSTLIIKNLATTVTQEDLEELFEQYE-PELVQLHYGPTGESNGCADLIVPHAQVAI 146
Query: 567 KAMKQYNGVPLDGRAMNI 620
K GV LDG + +
Sbjct: 147 -IQKALEGVLLDGEPIEV 163
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 46.8 bits (106), Expect = 1e-05
Identities = 24/60 (40%), Positives = 33/60 (55%)
Frame = +3
Query: 408 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQYN 587
L V NLD V D +K+ F +G + SA V D +GRS G V FE+ +A A+ + N
Sbjct: 319 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAVTEMN 378
Score = 39.1 bits (87), Expect = 0.003
Identities = 32/85 (37%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Frame = +3
Query: 369 QRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGR-SLGTADVVF 545
Q +G+ T L V +L V++S + E FS G + S V D + R SLG A V F
Sbjct: 22 QNQTGSSYT-MASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNF 80
Query: 546 ERKADAVKAMKQYNGVPLDGRAMNI 620
++ ADA +AM N L G+ M I
Sbjct: 81 QQPADAERAMDTMNFEALHGKPMRI 105
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 45.6 bits (103), Expect = 3e-05
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Frame = +3
Query: 414 VSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAMKQYNG 590
V N+ + ++ +I F+ G + + + YDR +GR G A V F +A A +A++Q NG
Sbjct: 10 VGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEEAGAQRAVEQLNG 69
Query: 591 VPLDGRAMNIQLA 629
V +GR + + A
Sbjct: 70 VAFNGRNLRVNYA 82
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 45.2 bits (102), Expect = 4e-05
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Frame = +3
Query: 393 TGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVK 569
+G + V N F ++ ++ FS G + + + DR +GR G A + F + A +
Sbjct: 2 SGIFSVYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQR 61
Query: 570 AMKQYNGVPLDGRAMNIQLA 629
A++Q NG +GR + + LA
Sbjct: 62 AVEQMNGAEFNGRPLRVNLA 81
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 43.6 bits (98), Expect = 1e-04
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Frame = +3
Query: 399 PTKLL-VSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKA 572
P+K L V NL ++ D++++F EFG + + YDR SG S G + F DA A
Sbjct: 74 PSKCLGVFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYFNLIEDATAA 133
Query: 573 MKQYNGVPLDGRAMNIQLATSE 638
+ LDG + + + ++
Sbjct: 134 RDKLCNTDLDGHKIRVDFSLTK 155
Score = 32.7 bits (71), Expect = 0.23
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +3
Query: 162 RIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKS 293
R GGG G ++ + R G GGG +R GG + G GG +S
Sbjct: 214 RYGGGGGDRYGGD-RYGGGGGRRGSPDRRGGFRSGGGGGGYMRS 256
Score = 32.3 bits (70), Expect = 0.31
Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +3
Query: 162 RIGGGAGRKFDANKRTG-RGGGAGFRSNRSGGVQRGRNR 275
R GGG GR+ ++R G R GG G RSGG G +R
Sbjct: 227 RYGGGGGRRGSPDRRGGFRSGGGGGGYMRSGGGGGGPDR 265
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 168 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 281
G G ++ ++R G GGG G R GG + G +R G
Sbjct: 192 GSRGGDRYGGDRRGGGGGGGGDRYGGGGGDRYGGDRYG 229
Score = 28.3 bits (60), Expect = 5.0
Identities = 17/40 (42%), Positives = 19/40 (47%)
Frame = +3
Query: 162 RIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 281
R GGG G +F N R RGG R GG G +R G
Sbjct: 179 RFGGGGGDRF--NDRGSRGGDRYGGDRRGGGGGGGGDRYG 216
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 43.6 bits (98), Expect = 1e-04
Identities = 24/84 (28%), Positives = 43/84 (51%)
Frame = +3
Query: 390 TTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVK 569
T +K+ V N+ F +D ++K LFS+FG + S + G+ G A V F+ +A A K
Sbjct: 679 TLEKSKVFVRNVHFQATDDELKALFSKFGTVTSVRRVTHKDGKPKGIAFVDFDTEASAQK 738
Query: 570 AMKQYNGVPLDGRAMNIQLATSEI 641
+ + + L R + + L+ +
Sbjct: 739 CVASGDKLMLRERELEVALSNPPV 762
Score = 29.5 bits (63), Expect = 2.2
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Frame = +3
Query: 408 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRS----LGTADVVFERKADAVKAM 575
+ VSNLDF ++ +I++ G+ AS+ + R S G A VV E A +A+
Sbjct: 595 IFVSNLDFTTTEDEIRQAIE--GV---ASIRFARKANSDLVHRGFAYVVMENDQKAQQAL 649
Query: 576 KQYNGVPLDGRAMNI 620
+ + VP+ GR M I
Sbjct: 650 LK-DRVPVKGRPMFI 663
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 41.9 bits (94), Expect = 4e-04
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Frame = +3
Query: 408 LLVSNLDFGVSDSDIKELFSEFG-ILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQY 584
+ V N+ + VS+ I+ +FS+ G +L VH +G+ G + F A A++
Sbjct: 20 VFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQTAEVAIRNL 79
Query: 585 NGVPLDGRAMNIQLATSEIN 644
NG L GR + + A +N
Sbjct: 80 NGYELSGRILRVDSAAGGMN 99
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 41.9 bits (94), Expect = 4e-04
Identities = 20/59 (33%), Positives = 36/59 (61%)
Frame = +3
Query: 405 KLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 581
KL + L ++ +++E+F++FG ++ SV D+ G+S G A V F ++ AV A K+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKE 201
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 41.9 bits (94), Expect = 4e-04
Identities = 20/59 (33%), Positives = 36/59 (61%)
Frame = +3
Query: 405 KLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 581
KL + L ++ +++E+F++FG ++ SV D+ G+S G A V F ++ AV A K+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKE 201
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 41.9 bits (94), Expect = 4e-04
Identities = 20/59 (33%), Positives = 36/59 (61%)
Frame = +3
Query: 405 KLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 581
KL + L ++ +++E+F++FG ++ SV D+ G+S G A V F ++ AV A K+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKE 201
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 41.9 bits (94), Expect = 4e-04
Identities = 20/59 (33%), Positives = 36/59 (61%)
Frame = +3
Query: 405 KLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 581
KL + L ++ +++E+F++FG ++ SV D+ G+S G A V F ++ AV A K+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKE 201
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 41.9 bits (94), Expect = 4e-04
Identities = 20/59 (33%), Positives = 36/59 (61%)
Frame = +3
Query: 405 KLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 581
KL + L ++ +++E+F++FG ++ SV D+ G+S G A V F ++ AV A K+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKE 201
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 41.9 bits (94), Expect = 4e-04
Identities = 20/59 (33%), Positives = 36/59 (61%)
Frame = +3
Query: 405 KLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 581
KL + L ++ +++E+F++FG ++ SV D+ G+S G A V F ++ AV A K+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKE 201
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 41.9 bits (94), Expect = 4e-04
Identities = 22/73 (30%), Positives = 40/73 (54%)
Frame = +3
Query: 405 KLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQY 584
K+ V NL V + +++++F ++G +K + +SGR A V FE DA A++
Sbjct: 10 KVYVGNLPGDVREKEVEDIFHKYGRIKYVDI---KSGRGPAFAFVEFEDHRDAEDAVRAR 66
Query: 585 NGVPLDGRAMNIQ 623
+G DGR + ++
Sbjct: 67 DGYEFDGRRIRVE 79
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 41.9 bits (94), Expect = 4e-04
Identities = 22/73 (30%), Positives = 40/73 (54%)
Frame = +3
Query: 405 KLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQY 584
K+ V NL V + +++++F ++G +K + +SGR A V FE DA A++
Sbjct: 10 KVYVGNLPGDVREKEVEDIFHKYGRIKYVDI---KSGRGPAFAFVEFEDHRDAEDAVRAR 66
Query: 585 NGVPLDGRAMNIQ 623
+G DGR + ++
Sbjct: 67 DGYEFDGRRIRVE 79
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 40.3 bits (90), Expect = 0.001
Identities = 25/95 (26%), Positives = 42/95 (44%)
Frame = +3
Query: 345 NDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSL 524
N F S + K+ + L +++ +KEL FG LK+ S++ D G S
Sbjct: 272 NTFDMNSRMPVSTIVVDSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSK 331
Query: 525 GTADVVFERKADAVKAMKQYNGVPLDGRAMNIQLA 629
G A + +A+ NG+ L + + +QLA
Sbjct: 332 GYAFAEYLDPTLTDQAIAGLNGMQLGDKQLVVQLA 366
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = +3
Query: 168 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNR 275
GGG R ++ RGGG R GG R+R
Sbjct: 87 GGGGDRDRSRSRERRRGGGGRDEPRRRGGDDEARSR 122
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 40.3 bits (90), Expect = 0.001
Identities = 26/98 (26%), Positives = 49/98 (50%)
Frame = +3
Query: 336 DMFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSG 515
D++ D+ E + + + T++ L + N+ V++ + ELF E+ L DR
Sbjct: 356 DVYVDWAEHQEEPDEDTMSKVKV-LYIRNIKEAVTEEKLNELFKEYASL-------DRVK 407
Query: 516 RSLGTADVVFERKADAVKAMKQYNGVPLDGRAMNIQLA 629
+ A + F + D +KAM+++NG L+G + LA
Sbjct: 408 KVKDYAFIHFNERDDCLKAMEEWNGKELEGTVVEASLA 445
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Frame = +3
Query: 168 GGGAGRKFDANKRTGRGGGAGFRSN--RSGGVQRGRNRG 278
GGG + R G GGG GFR GG+ R RG
Sbjct: 543 GGGFRGGMRGSPRGGMGGGGGFRGGPPGRGGMANRRGRG 581
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 40.3 bits (90), Expect = 0.001
Identities = 25/95 (26%), Positives = 42/95 (44%)
Frame = +3
Query: 345 NDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSL 524
N F S + K+ + L +++ +KEL FG LK+ S++ D G S
Sbjct: 272 NTFDMNSRMPVSTIVVDSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSK 331
Query: 525 GTADVVFERKADAVKAMKQYNGVPLDGRAMNIQLA 629
G A + +A+ NG+ L + + +QLA
Sbjct: 332 GYAFAEYLDPTLTDQAIAGLNGMQLGDKQLVVQLA 366
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = +3
Query: 168 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNR 275
GGG R ++ RGGG R GG R+R
Sbjct: 87 GGGGDRDRSRSRERRRGGGGRDEPRRRGGDDEARSR 122
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 40.3 bits (90), Expect = 0.001
Identities = 25/95 (26%), Positives = 42/95 (44%)
Frame = +3
Query: 345 NDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSL 524
N F S + K+ + L +++ +KEL FG LK+ S++ D G S
Sbjct: 247 NTFDMNSRMPVSTIVVDSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSK 306
Query: 525 GTADVVFERKADAVKAMKQYNGVPLDGRAMNIQLA 629
G A + +A+ NG+ L + + +QLA
Sbjct: 307 GYAFAEYLDPTLTDQAIAGLNGMQLGDKQLVVQLA 341
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 40.3 bits (90), Expect = 0.001
Identities = 25/95 (26%), Positives = 42/95 (44%)
Frame = +3
Query: 345 NDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSL 524
N F S + K+ + L +++ +KEL FG LK+ S++ D G S
Sbjct: 250 NTFDMNSRMPVSTIVVDSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSK 309
Query: 525 GTADVVFERKADAVKAMKQYNGVPLDGRAMNIQLA 629
G A + +A+ NG+ L + + +QLA
Sbjct: 310 GYAFAEYLDPTLTDQAIAGLNGMQLGDKQLVVQLA 344
Score = 32.3 bits (70), Expect = 0.31
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +3
Query: 150 NKKTRIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 281
N K+ GGG G D ++ RGGG G +RS +R R GG
Sbjct: 42 NLKSSTGGGGGED-DNDRGERRGGGGGGDRDRSRSRERRRGGGG 84
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = +3
Query: 168 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNR 275
GGG R ++ RGGG R GG R+R
Sbjct: 65 GGGGDRDRSRSRERRRGGGGRDEPRRRGGDDEARSR 100
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 38.3 bits (85), Expect = 0.005
Identities = 16/72 (22%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Frame = +3
Query: 408 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAMKQY 584
+ + L + +S+ D+ +FS++G + + ++ D+ +G+S G A + ++ + + A+ +
Sbjct: 40 IYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQRSTILAVDNF 99
Query: 585 NGVPLDGRAMNI 620
NG+ L R + +
Sbjct: 100 NGISLHKRMIRV 111
>Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical
protein R05H10.2 protein.
Length = 608
Score = 37.5 bits (83), Expect = 0.008
Identities = 29/84 (34%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
Frame = +3
Query: 384 TITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASV-HYDRSGRSLGTADVVFERKAD 560
+IT G L NL + + IKE S+FG + A + Y SG S GTA V F +
Sbjct: 258 SITEGKVVFL-RNLSYDTKEELIKEELSKFGKIDLAIICKYKDSGHSKGTAFVHFSTPIE 316
Query: 561 AVKAMKQY-NGVPLDGRAMNIQLA 629
A ++ +GV +D R + LA
Sbjct: 317 ASNCIEGVEDGVIIDNRLVKANLA 340
>Z81038-2|CAB02757.1| 454|Caenorhabditis elegans Hypothetical
protein C25A1.4 protein.
Length = 454
Score = 37.5 bits (83), Expect = 0.008
Identities = 18/74 (24%), Positives = 36/74 (48%)
Frame = +3
Query: 405 KLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQY 584
++ ++NL F V + E+F G + D+ G+S G + + +AV+A+
Sbjct: 189 RIFIANLAFNVGTDKLYEVFGMAGKITWMDFRIDKEGKSKGVCVIQYTHPIEAVQAVSML 248
Query: 585 NGVPLDGRAMNIQL 626
NG L R + +++
Sbjct: 249 NGQRLFDRNLVVKM 262
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 37.5 bits (83), Expect = 0.008
Identities = 43/162 (26%), Positives = 71/162 (43%), Gaps = 9/162 (5%)
Frame = +3
Query: 171 GGAGRKFDANKRTGRGGGAGFRSNRSGGVQRG--------RNRGGITKSTNYSR-GDVNS 323
GG ++ ++N GGG G NR GG +RG N GG R G +
Sbjct: 35 GGDEKRGNSNNAARSGGGGG--GNR-GGAERGIAPAQQPYDNNGGHRSGGGGGRSGGGGT 91
Query: 324 TWKHDMFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHY 503
++ F + + + TG +L V NL V ++++KELFS G + +
Sbjct: 92 SFNGAAFTE--SQLMDEVPKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYL-- 147
Query: 504 DRSGRSLGTADVVFERKADAVKAMKQYNGVPLDGRAMNIQLA 629
SG+ G A + + +A A A + +G + GR + ++ A
Sbjct: 148 --SGK--GFAFLRLDTRAHAESAKEAIDGRIIHGRQVRVRFA 185
Score = 31.9 bits (69), Expect = 0.41
Identities = 20/54 (37%), Positives = 26/54 (48%)
Frame = +3
Query: 414 VSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAM 575
V L VS+ + FS FG ++ A D GR G V FERK + +AM
Sbjct: 193 VKELSPTVSNEMLYHAFSHFGDVERAVHIVDEKGRPTGEGIVEFERKPNCNEAM 246
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 37.5 bits (83), Expect = 0.008
Identities = 43/162 (26%), Positives = 71/162 (43%), Gaps = 9/162 (5%)
Frame = +3
Query: 171 GGAGRKFDANKRTGRGGGAGFRSNRSGGVQRG--------RNRGGITKSTNYSR-GDVNS 323
GG ++ ++N GGG G NR GG +RG N GG R G +
Sbjct: 35 GGDEKRGNSNNAARSGGGGG--GNR-GGAERGIAPAQQPYDNNGGHRSGGGGGRSGGGGT 91
Query: 324 TWKHDMFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHY 503
++ F + + + TG +L V NL V ++++KELFS G + +
Sbjct: 92 SFNGAAFTE--SQLMDEVPKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYL-- 147
Query: 504 DRSGRSLGTADVVFERKADAVKAMKQYNGVPLDGRAMNIQLA 629
SG+ G A + + +A A A + +G + GR + ++ A
Sbjct: 148 --SGK--GFAFLRLDTRAHAESAKEAIDGRIIHGRQVRVRFA 185
Score = 31.9 bits (69), Expect = 0.41
Identities = 20/54 (37%), Positives = 26/54 (48%)
Frame = +3
Query: 414 VSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAM 575
V L VS+ + FS FG ++ A D GR G V FERK + +AM
Sbjct: 193 VKELSPTVSNEMLYHAFSHFGDVERAVHIVDEKGRPTGEGIVEFERKPNCNEAM 246
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 37.1 bits (82), Expect = 0.011
Identities = 22/77 (28%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = +3
Query: 408 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRSLGTADVVFERKADAVKAMKQY 584
L V L+ +D D++ +FS FG + + + D RSG SL A + F+ +A +
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKM 302
Query: 585 NGVPLDGRAMNIQLATS 635
+ V +D R +++ + S
Sbjct: 303 DNVLIDDRRIHVDFSQS 319
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 37.1 bits (82), Expect = 0.011
Identities = 22/77 (28%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = +3
Query: 408 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRSLGTADVVFERKADAVKAMKQY 584
L V L+ +D D++ +FS FG + + + D RSG SL A + F+ +A +
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKM 302
Query: 585 NGVPLDGRAMNIQLATS 635
+ V +D R +++ + S
Sbjct: 303 DNVLIDDRRIHVDFSQS 319
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 37.1 bits (82), Expect = 0.011
Identities = 22/77 (28%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = +3
Query: 408 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRSLGTADVVFERKADAVKAMKQY 584
L V L+ +D D++ +FS FG + + + D RSG SL A + F+ +A +
Sbjct: 174 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKM 233
Query: 585 NGVPLDGRAMNIQLATS 635
+ V +D R +++ + S
Sbjct: 234 DNVLIDDRRIHVDFSQS 250
>U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical
protein C27H5.3 protein.
Length = 448
Score = 36.7 bits (81), Expect = 0.014
Identities = 22/39 (56%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +3
Query: 168 GGGAGRK-FDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 281
GGG GR FD GRGGG GFR GG RG +RGG
Sbjct: 326 GGGGGRGGFDG----GRGGGGGFRGGDRGGF-RGGDRGG 359
Score = 29.1 bits (62), Expect = 2.9
Identities = 20/56 (35%), Positives = 23/56 (41%), Gaps = 5/56 (8%)
Frame = +3
Query: 168 GGGAGRKFDANKRTGRGGG--AGFRSNRSGGVQ---RGRNRGGITKSTNYSRGDVN 320
G G G F R G GG GFR GG + RG +RGG G+ N
Sbjct: 337 GRGGGGGFRGGDRGGFRGGDRGGFRGGDRGGFRGGDRGGDRGGFRGGRGVGGGNAN 392
>AF043700-5|AAB97575.2| 573|Caenorhabditis elegans Lipid depleted
protein 6 protein.
Length = 573
Score = 36.3 bits (80), Expect = 0.019
Identities = 20/38 (52%), Positives = 21/38 (55%)
Frame = +3
Query: 168 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 281
GGG R D GRGGG GFR R GG + G RGG
Sbjct: 535 GGGGFRGGDRGGFRGRGGGGGFRGGR-GGDRGGGFRGG 571
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/24 (62%), Positives = 15/24 (62%)
Frame = +3
Query: 210 GRGGGAGFRSNRSGGVQRGRNRGG 281
GRGGG GFR GG RGR GG
Sbjct: 533 GRGGG-GFRGGDRGGF-RGRGGGG 554
>AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical
protein C50D2.5 protein.
Length = 138
Score = 35.1 bits (77), Expect = 0.044
Identities = 18/67 (26%), Positives = 35/67 (52%)
Frame = +3
Query: 408 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQYN 587
L + NL + ++ ++ E+F +FG ++ + + + GTA VV+E DA A + +
Sbjct: 21 LYIKNLPYKITTEEMYEIFGKFGAVR--QIRVGNTAETRGTAFVVYEDIFDAKTACEHLS 78
Query: 588 GVPLDGR 608
G + R
Sbjct: 79 GYNVSNR 85
>Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical
protein R74.5b protein.
Length = 286
Score = 34.7 bits (76), Expect = 0.058
Identities = 16/62 (25%), Positives = 32/62 (51%)
Frame = +3
Query: 459 LFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQYNGVPLDGRAMNIQLATSE 638
+F + G + + ++ G S G V + DA +A ++NG ++GR + + LAT
Sbjct: 1 MFEKVGPVVDVEIIFNERG-SKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLATQR 59
Query: 639 IN 644
++
Sbjct: 60 VH 61
>U55857-7|AAA98033.1| 217|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 3 protein.
Length = 217
Score = 34.7 bits (76), Expect = 0.058
Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Frame = +3
Query: 408 LLVSNLDFGVSDSDIKE----LFSEFG-ILKSASVHYDRSGRSLGTADVVFERKADAVKA 572
+ V+NL+ V ++K +F++FG I++ S R + G A +VF+ + A A
Sbjct: 10 IYVNNLNEKVKKDELKRSLHMVFTQFGEIIQLMSF---RKEKMRGQAHIVFKEVSSASNA 66
Query: 573 MKQYNGVPLDGRAMNIQLATSEINTL 650
++ G P G+ M IQ A + + +
Sbjct: 67 LRALQGFPFYGKPMRIQYAREDSDVI 92
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 34.3 bits (75), Expect = 0.076
Identities = 22/68 (32%), Positives = 38/68 (55%)
Frame = +3
Query: 402 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 581
T + V N+ +D+D+++LFS +G + A V ++ R A V +E+K A KA+ +
Sbjct: 237 TSVYVGNISQQTTDADLRDLFSTYGDI--AEVRIFKTQR---YAFVRYEKKECATKAIME 291
Query: 582 YNGVPLDG 605
NG + G
Sbjct: 292 MNGKEMAG 299
>AF125462-1|AAD12858.2| 244|Caenorhabditis elegans Hypothetical
protein Y66H1A.4 protein.
Length = 244
Score = 34.3 bits (75), Expect = 0.076
Identities = 24/65 (36%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Frame = +3
Query: 171 GGAGRKFDANKR-TGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFN 347
GG GR D R + RGG GF GG RG +RGG RG ++
Sbjct: 156 GGRGRGGDRGGRGSDRGGRGGFGRGGGGGF-RGGDRGGFGGGRGGFRGGDRGGFRGGRGG 214
Query: 348 DFGER 362
DFG R
Sbjct: 215 DFGGR 219
Score = 31.9 bits (69), Expect = 0.41
Identities = 16/26 (61%), Positives = 16/26 (61%)
Frame = +3
Query: 204 RTGRGGGAGFRSNRSGGVQRGRNRGG 281
R GRGGG GFR R GG G RGG
Sbjct: 4 RGGRGGGGGFRGGRGGG-GGGGFRGG 28
Score = 30.3 bits (65), Expect = 1.2
Identities = 19/40 (47%), Positives = 21/40 (52%)
Frame = +3
Query: 162 RIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 281
R G G G F + G GGG GFR R GG + G RGG
Sbjct: 4 RGGRGGGGGFRGGR--GGGGGGGFRGGR-GGDRGGGFRGG 40
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/35 (45%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +3
Query: 168 GGGAGRKFDANKRTGRGGG-AGFRSNRSGGVQRGR 269
G G G F R G GGG GFR GG + GR
Sbjct: 178 GRGGGGGFRGGDRGGFGGGRGGFRGGDRGGFRGGR 212
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 33.5 bits (73), Expect = 0.13
Identities = 20/53 (37%), Positives = 22/53 (41%)
Frame = +3
Query: 162 RIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVN 320
R GGG G G GGG G+ GG RG RGG S DV+
Sbjct: 29 RGGGGGGYSGGRGGGYGGGGGGGYGGGGYGGGGRGGGRGGSNGSAGGRLRDVD 81
>Z81525-8|CAB04257.1| 208|Caenorhabditis elegans Hypothetical
protein F33A8.3 protein.
Length = 208
Score = 33.5 bits (73), Expect = 0.13
Identities = 16/38 (42%), Positives = 18/38 (47%)
Frame = +3
Query: 168 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 281
G G GR + T R G R R GG + GR RGG
Sbjct: 156 GRGGGRTNSGGEETARDTDGGERGGRGGGRRGGRGRGG 193
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = +3
Query: 162 RIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 281
R GG G + D+ R GGA R G + G RGG
Sbjct: 120 RRGGRGGIRHDSGSRDAEEGGAPRGGGRGGSRRGGGGRGG 159
>Z78013-8|CAN99686.1| 373|Caenorhabditis elegans Hypothetical
protein F15B9.10 protein.
Length = 373
Score = 33.5 bits (73), Expect = 0.13
Identities = 25/69 (36%), Positives = 31/69 (44%), Gaps = 6/69 (8%)
Frame = +3
Query: 168 GGGAGRKFDANKRTGRGGGAG-----FRSNRSGGVQRGRNRGGITKSTNYSRGDVN-STW 329
GGGAG F +G G AG F SNR GG G GG + Y G N S
Sbjct: 282 GGGAGGMFRNILSSGGGAAAGSMLGRFLSNRGGGGGGGGGMGGGNRGYGYQGGGSNPSGQ 341
Query: 330 KHDMFNDFG 356
+ +++D G
Sbjct: 342 QGPVYDDNG 350
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 33.5 bits (73), Expect = 0.13
Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +3
Query: 168 GGGAGR--KFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 281
GGG GR + N+ G GG G+ +N GG RG RGG
Sbjct: 26 GGGPGRWGGWGGNRWGGGGGPGGWGNNGGGGWGRGGGRGG 65
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/37 (40%), Positives = 16/37 (43%)
Frame = +3
Query: 171 GGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 281
GG GR D G GG + N GG G RGG
Sbjct: 137 GGGGRGGDGRGPPGSNGGGDWGGNGGGGRGGGGGRGG 173
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 33.5 bits (73), Expect = 0.13
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = +3
Query: 147 ANKKTRIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 281
A ++ GG G + + GGG GF R GG G NR G
Sbjct: 593 APRRPFTNGGFGAHSSLSSTSNSGGGGGFSGPRRGGFNSGMNRQG 637
Score = 29.9 bits (64), Expect = 1.6
Identities = 21/47 (44%), Positives = 22/47 (46%), Gaps = 8/47 (17%)
Frame = +3
Query: 162 RIGGG---AGRKFDANK-RTGRGGGAGFRSN----RSGGVQRGRNRG 278
RIGGG R+F A R GRGGG F N SGG G G
Sbjct: 536 RIGGGQRGGNRRFGATDYRVGRGGGGSFGGNFSNYNSGGATGGFGSG 582
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 33.5 bits (73), Expect = 0.13
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = +3
Query: 147 ANKKTRIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 281
A ++ GG G + + GGG GF R GG G NR G
Sbjct: 577 APRRPFTNGGFGAHSSLSSTSNSGGGGGFSGPRRGGFNSGMNRQG 621
Score = 29.9 bits (64), Expect = 1.6
Identities = 21/47 (44%), Positives = 22/47 (46%), Gaps = 8/47 (17%)
Frame = +3
Query: 162 RIGGG---AGRKFDANK-RTGRGGGAGFRSN----RSGGVQRGRNRG 278
RIGGG R+F A R GRGGG F N SGG G G
Sbjct: 520 RIGGGQRGGNRRFGATDYRVGRGGGGSFGGNFSNYNSGGATGGFGSG 566
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 33.5 bits (73), Expect = 0.13
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = +3
Query: 147 ANKKTRIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 281
A ++ GG G + + GGG GF R GG G NR G
Sbjct: 574 APRRPFTNGGFGAHSSLSSTSNSGGGGGFSGPRRGGFNSGMNRQG 618
Score = 29.9 bits (64), Expect = 1.6
Identities = 21/47 (44%), Positives = 22/47 (46%), Gaps = 8/47 (17%)
Frame = +3
Query: 162 RIGGG---AGRKFDANK-RTGRGGGAGFRSN----RSGGVQRGRNRG 278
RIGGG R+F A R GRGGG F N SGG G G
Sbjct: 517 RIGGGQRGGNRRFGATDYRVGRGGGGSFGGNFSNYNSGGATGGFGSG 563
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 33.1 bits (72), Expect = 0.18
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 8/92 (8%)
Frame = +3
Query: 387 ITTGPTKLLVSNLDFGVSDSDIKELFSE-FG-ILKSASVHYDRSGR------SLGTADVV 542
I +G T L V NL F +D ++ LF + +G ++KSA + + S+G V
Sbjct: 637 IESGST-LFVKNLAFDTTDGSLEFLFRKRYGDLVKSAQISKKLNPAEPTKPLSMGFGFVQ 695
Query: 543 FERKADAVKAMKQYNGVPLDGRAMNIQLATSE 638
F DA A+K G LDG ++ ++++ E
Sbjct: 696 FYTAFDAKTALKDMQGELLDGHSLELKISHRE 727
>Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical
protein T12D8.2 protein.
Length = 207
Score = 32.7 bits (71), Expect = 0.23
Identities = 20/46 (43%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = +3
Query: 150 NKKTRIGGGAGRKFDANKRTGRGGGAG-FRSNRSGG-VQRGRNRGG 281
++ R GG GR + R GRG GAG FR GG G RGG
Sbjct: 92 DRSDRGGGRGGRGGNFGDRGGRGRGAGGFRRGGEGGRFNEGERRGG 137
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 32.7 bits (71), Expect = 0.23
Identities = 19/49 (38%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = +3
Query: 168 GGGAGRKFDANKR-TGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRG 311
GGG G R R GG G+ +R G RG +RGG ST G
Sbjct: 262 GGGGGFGGGGRDRFNDRSGGGGYGGDRDRGGDRGGDRGGSRYSTGGGSG 310
>AF016672-7|AAB66119.1| 378|Caenorhabditis elegans Vig (drosophila
vasa intronic gene)ortholog protein 1, isoform a
protein.
Length = 378
Score = 32.7 bits (71), Expect = 0.23
Identities = 17/47 (36%), Positives = 21/47 (44%)
Frame = +3
Query: 171 GGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRG 311
GGAGR D + + G NR GG +RG RG + RG
Sbjct: 80 GGAGRPRDGERVSNENGDRPQGENRRGGPRRGGERGAARPAGRGGRG 126
>Z68302-2|CAA92631.1| 630|Caenorhabditis elegans Hypothetical
protein ZK792.5 protein.
Length = 630
Score = 32.3 bits (70), Expect = 0.31
Identities = 27/71 (38%), Positives = 31/71 (43%), Gaps = 8/71 (11%)
Frame = +3
Query: 162 RIGGGAGRKFDA----NKRTGRGGGA-GFRSNR---SGGVQRGRNRGGITKSTNYSRGDV 317
R GGG GR D N R GRGGG GF NR +G ++ R G TN + D
Sbjct: 56 RGGGGRGRGGDGGFRRNDRGGRGGGGRGFGGNREFSAGDFEKQYGRVGGGDDTNSGQPDS 115
Query: 318 NSTWKHDMFND 350
FND
Sbjct: 116 YGQADSASFND 126
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 32.3 bits (70), Expect = 0.31
Identities = 27/106 (25%), Positives = 42/106 (39%)
Frame = +3
Query: 297 NYSRGDVNSTWKHDMFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFG 476
N R + F GER+ + +L++ NL S DIK+ + G
Sbjct: 77 NEERSGSGFRGREPTFRKGGERQFSNRYSRPCSTRFRLVIDNLSTRYSWQDIKDHIRKLG 136
Query: 477 ILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQYNGVPLDGRAM 614
I + S + R++ A V F D AM + G L+GR +
Sbjct: 137 IEPTYS---EAHKRNVNQAIVCFTSHDDLRDAMNKLQGEDLNGRKL 179
>U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical
protein F25B5.7b protein.
Length = 165
Score = 32.3 bits (70), Expect = 0.31
Identities = 32/111 (28%), Positives = 48/111 (43%), Gaps = 9/111 (8%)
Frame = +3
Query: 171 GGAGRKFDANKRTGRGGGAGFRSNRSGGVQRG--------RNRGGITKSTNYSR-GDVNS 323
GG ++ ++N GGG G NR GG +RG N GG R G +
Sbjct: 35 GGDEKRGNSNNAARSGGGGG--GNR-GGAERGIAPAQQPYDNNGGHRSGGGGGRSGGGGT 91
Query: 324 TWKHDMFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFG 476
++ F + + + TG +L V NL V ++++KELFS G
Sbjct: 92 SFNGAAFTE--SQLMDEVPKKKFTGRCRLFVGNLPNEVKETELKELFSPHG 140
>AF106574-2|AAM81088.1| 315|Caenorhabditis elegans Hypothetical
protein E02D9.1b protein.
Length = 315
Score = 32.3 bits (70), Expect = 0.31
Identities = 19/50 (38%), Positives = 24/50 (48%)
Frame = +3
Query: 132 DDIIKANKKTRIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 281
+D A+ K G G ++ + K G GGG G R R G RG RGG
Sbjct: 233 EDTTPAHLKNGSGDGEEKEDEEKKEGGEGGGRGGRGGRGGF--RGGFRGG 280
>AF106574-1|AAY44015.1| 317|Caenorhabditis elegans Hypothetical
protein E02D9.1c protein.
Length = 317
Score = 32.3 bits (70), Expect = 0.31
Identities = 19/50 (38%), Positives = 24/50 (48%)
Frame = +3
Query: 132 DDIIKANKKTRIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 281
+D A+ K G G ++ + K G GGG G R R G RG RGG
Sbjct: 233 EDTTPAHLKNGSGDGEEKEDEEKKEGGEGGGRGGRGGRGGF--RGGFRGG 280
>Z70783-9|CAA94857.2| 455|Caenorhabditis elegans Hypothetical
protein ZK856.9 protein.
Length = 455
Score = 31.9 bits (69), Expect = 0.41
Identities = 17/46 (36%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Frame = +3
Query: 168 GGGAGRKFDANKRTGRGGG--AGFRSNRSGGVQRGRNRGGITKSTN 299
GGG KR G+ GG GF+ R G G RGG T+
Sbjct: 387 GGGGSNHNIFRKRPGQDGGQDGGFKRGRGGNFHGGSRRGGYQNRTH 432
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 31.9 bits (69), Expect = 0.41
Identities = 13/41 (31%), Positives = 26/41 (63%)
Frame = +3
Query: 405 KLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLG 527
KL + L ++ +++E+F++FG ++ SV D+ G+S G
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRG 183
>AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 31.9 bits (69), Expect = 0.41
Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +3
Query: 435 VSDSDIKELFSEFGILKSASVHYDRS-GRSLGTADVVFERKADAVKAMKQ 581
V+ +I ++FSEFG++ ++ D+ G G A V FER + +A+++
Sbjct: 330 VTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRALEK 379
>AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 31.9 bits (69), Expect = 0.41
Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +3
Query: 435 VSDSDIKELFSEFGILKSASVHYDRS-GRSLGTADVVFERKADAVKAMKQ 581
V+ +I ++FSEFG++ ++ D+ G G A V FER + +A+++
Sbjct: 330 VTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRALEK 379
>AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization of
germline protein1, isoform a protein.
Length = 405
Score = 31.9 bits (69), Expect = 0.41
Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +3
Query: 435 VSDSDIKELFSEFGILKSASVHYDRS-GRSLGTADVVFERKADAVKAMKQ 581
V+ +I ++FSEFG++ ++ D+ G G A V FER + +A+++
Sbjct: 116 VTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRALEK 165
>AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization of
germline protein1, isoform b protein.
Length = 619
Score = 31.9 bits (69), Expect = 0.41
Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +3
Query: 435 VSDSDIKELFSEFGILKSASVHYDRS-GRSLGTADVVFERKADAVKAMKQ 581
V+ +I ++FSEFG++ ++ D+ G G A V FER + +A+++
Sbjct: 330 VTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRALEK 379
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 31.5 bits (68), Expect = 0.54
Identities = 18/38 (47%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Frame = +3
Query: 168 GGGAGRKFDANKRTGRGGGAGFRSNRSGG-VQRGRNRG 278
GGG GR R G GGG G R GG GR RG
Sbjct: 99 GGGGGRGGGGGGRGGGGGGGGGRGGGGGGRGGGGRGRG 136
Score = 29.9 bits (64), Expect = 1.6
Identities = 17/37 (45%), Positives = 17/37 (45%)
Frame = +3
Query: 171 GGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 281
GG GR GRGGG G R GG G RGG
Sbjct: 90 GGGGRGGGGGGGGGRGGGGGGRGGGGGG---GGGRGG 123
Score = 29.5 bits (63), Expect = 2.2
Identities = 18/40 (45%), Positives = 18/40 (45%)
Frame = +3
Query: 162 RIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 281
R GGG G GRGGG G R GG G RGG
Sbjct: 94 RGGGGGGGGGRGGGGGGRGGGGGGGGGRGGG---GGGRGG 130
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = +3
Query: 168 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 281
GGG G G GGG R GG G RGG
Sbjct: 69 GGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRGG 106
Score = 27.5 bits (58), Expect = 8.7
Identities = 18/40 (45%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Frame = +3
Query: 168 GGG--AGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 281
GGG G N GRGGG G R GG GR GG
Sbjct: 77 GGGNWGGNGGGGNGGGGRGGGGGGGGGRGGG-GGGRGGGG 115
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = +3
Query: 168 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 281
GG G R G GGG G R GG G GG
Sbjct: 82 GGNGGGGNGGGGRGGGGGGGGGRGGGGGGRGGGGGGGG 119
>L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family
protein 1, isoform b protein.
Length = 737
Score = 31.5 bits (68), Expect = 0.54
Identities = 15/38 (39%), Positives = 16/38 (42%)
Frame = +3
Query: 168 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 281
GGG G G GGG GF N GG+ GG
Sbjct: 75 GGGGGNYGGGGGNQGGGGGGGFNFNDIGGLINSMGGGG 112
Score = 27.5 bits (58), Expect = 8.7
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = +3
Query: 168 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 281
GGG G F G GGG G GG Q G GG
Sbjct: 59 GGGGGGGFGGGNG-GFGGGGGGNYGGGGGNQGGGGGGG 95
>L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family
protein 1, isoform d protein.
Length = 759
Score = 31.5 bits (68), Expect = 0.54
Identities = 15/38 (39%), Positives = 16/38 (42%)
Frame = +3
Query: 168 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 281
GGG G G GGG GF N GG+ GG
Sbjct: 100 GGGGGNYGGGGGNQGGGGGGGFNFNDIGGLINSMGGGG 137
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 31.5 bits (68), Expect = 0.54
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = +3
Query: 174 GAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRG 278
GAG + GRGGGA + R GG Q GR G
Sbjct: 522 GAGGEAPGGGAGGRGGGAHGGAGRGGGYQGGRGGG 556
Score = 31.5 bits (68), Expect = 0.54
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = +3
Query: 168 GGGAGRKFDANKRTGRGGGAGFRSNRSG--GVQRGRNRGGITKSTNYSRGDVNSTWKHDM 341
GG GR A+ GRGG G++ R G G Q R+ G K + N++ +H
Sbjct: 530 GGAGGRGGGAHGGAGRGG--GYQGGRGGGRGFQNPRDLFGPPKGEEEQQQQANASMQHGY 587
Query: 342 FNDF 353
++ +
Sbjct: 588 YDHY 591
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 31.5 bits (68), Expect = 0.54
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = +3
Query: 174 GAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRG 278
GAG + GRGGGA + R GG Q GR G
Sbjct: 522 GAGGEAPGGGAGGRGGGAHGGAGRGGGYQGGRGGG 556
Score = 31.5 bits (68), Expect = 0.54
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = +3
Query: 168 GGGAGRKFDANKRTGRGGGAGFRSNRSG--GVQRGRNRGGITKSTNYSRGDVNSTWKHDM 341
GG GR A+ GRGG G++ R G G Q R+ G K + N++ +H
Sbjct: 530 GGAGGRGGGAHGGAGRGG--GYQGGRGGGRGFQNPRDLFGPPKGEEEQQQQANASMQHGY 587
Query: 342 FNDF 353
++ +
Sbjct: 588 YDHY 591
>AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical
protein K07H8.10 protein.
Length = 798
Score = 31.5 bits (68), Expect = 0.54
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +3
Query: 204 RTGRGGGAGFRSNRSGGVQRGRNRG 278
R GRGGG+GF GG RG +RG
Sbjct: 15 RGGRGGGSGFTPRGGGGGFRGGDRG 39
Score = 30.3 bits (65), Expect = 1.2
Identities = 21/52 (40%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Frame = +3
Query: 168 GGGAGRKFDANKRTGRGGGAGFRS---NRSGGVQRGRNRGGITKSTNYSRGD 314
GG G + + T RGGG GFR RS G RG +RG S+ + GD
Sbjct: 12 GGFRGGRGGGSGFTPRGGGGGFRGGDRGRSPGGFRGGDRG--RSSSGFRGGD 61
Score = 28.3 bits (60), Expect = 5.0
Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = +3
Query: 162 RIGGGAGRKFDANKRTG--RGGGAGFRSNRSGGVQRGRNRGG 281
R GGG R D + G RGG G S+ G RGR+ GG
Sbjct: 27 RGGGGGFRGGDRGRSPGGFRGGDRGRSSSGFRGGDRGRSPGG 68
>AF003140-8|AAB54169.1| 396|Caenorhabditis elegans Hypothetical
protein C44E4.4 protein.
Length = 396
Score = 31.5 bits (68), Expect = 0.54
Identities = 20/44 (45%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +3
Query: 147 ANKKTRIGGGAGRKFDANKRTGRGGGAGFRSNRSG-GVQRGRNR 275
A K R GGG G + R GRGG G R R G G +RG R
Sbjct: 322 ARKNQRQGGGRGGRGGRGGRGGRGGRGG-RGGRGGRGDRRGDKR 364
>Z66500-14|CAA91313.2| 1169|Caenorhabditis elegans Hypothetical
protein T05C12.10 protein.
Length = 1169
Score = 31.1 bits (67), Expect = 0.71
Identities = 21/71 (29%), Positives = 33/71 (46%)
Frame = +3
Query: 171 GGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFND 350
GG+G+ N ++G G G G ++N +GG G+++ G K + D + T N
Sbjct: 672 GGSGKGGAGNGKSGDGSGDG-KNNGNGGTGDGKDKNG--KGSGSGDNDKSGTRAAGKGNA 728
Query: 351 FGERKLQRNSG 383
G K N G
Sbjct: 729 EGNGKGNGNDG 739
Score = 28.7 bits (61), Expect = 3.8
Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = +3
Query: 168 GGGAGRKFDANKRTGRG-GGAGFRSNRSG-GVQRGRNRG 278
G G G++ D NK G G GGAG + +SG G G+N G
Sbjct: 659 GSGNGKEGDGNKSGGSGKGGAG--NGKSGDGSGDGKNNG 695
>Z49968-13|CAA90265.2| 1169|Caenorhabditis elegans Hypothetical
protein T05C12.10 protein.
Length = 1169
Score = 31.1 bits (67), Expect = 0.71
Identities = 21/71 (29%), Positives = 33/71 (46%)
Frame = +3
Query: 171 GGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFND 350
GG+G+ N ++G G G G ++N +GG G+++ G K + D + T N
Sbjct: 672 GGSGKGGAGNGKSGDGSGDG-KNNGNGGTGDGKDKNG--KGSGSGDNDKSGTRAAGKGNA 728
Query: 351 FGERKLQRNSG 383
G K N G
Sbjct: 729 EGNGKGNGNDG 739
Score = 28.7 bits (61), Expect = 3.8
Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = +3
Query: 168 GGGAGRKFDANKRTGRG-GGAGFRSNRSG-GVQRGRNRG 278
G G G++ D NK G G GGAG + +SG G G+N G
Sbjct: 659 GSGNGKEGDGNKSGGSGKGGAG--NGKSGDGSGDGKNNG 695
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical
protein T28C6.1 protein.
Length = 281
Score = 30.7 bits (66), Expect = 0.94
Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = +3
Query: 171 GGAGRKFDANKRTGRGG--GAGFRSNRSGGVQRGRNRGG 281
GG G D + G GG G G N+ GG RG N+GG
Sbjct: 168 GGWGGSQDGGSQGGWGGQNGGGQGGNQGGGGGRGGNQGG 206
Score = 27.9 bits (59), Expect = 6.6
Identities = 22/70 (31%), Positives = 28/70 (40%), Gaps = 5/70 (7%)
Frame = +3
Query: 162 RIGGGAGRKFDANKRTGRGGGAGFRSNRS-----GGVQRGRNRGGITKSTNYSRGDVNST 326
R G G GR + G GGAG + S GG G + GG S S+G +
Sbjct: 60 RGGSGGGRGGGSGGGRGGSGGAGAGGSGSGSGGWGGQDGGSSAGGWGGSQGGSQGGSSGG 119
Query: 327 WKHDMFNDFG 356
W +D G
Sbjct: 120 WGGSSRSDSG 129
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 30.7 bits (66), Expect = 0.94
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Frame = +3
Query: 408 LLVSNLDFGVSDSDIKELFSEFG-ILKSASVHYD-RSGRSLGTADVVFERKADAVKAMKQ 581
+ V NLD V + + + FS FG IL+ + D SG S G A + F + A++
Sbjct: 102 IFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEA 161
Query: 582 YNGVPLDGRAMNIQLA 629
NG L RA+ + A
Sbjct: 162 MNGQFLCNRAITVSYA 177
>U52003-5|AAG00057.1| 730|Caenorhabditis elegans P granule
abnormality protein 1,isoform a protein.
Length = 730
Score = 30.7 bits (66), Expect = 0.94
Identities = 20/41 (48%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Frame = +3
Query: 168 GGGAGRK-FDANKRTGRGGGAGFRSNRS--GGVQRGRNRGG 281
GGG GR + R GRGG G R R GG RG RGG
Sbjct: 672 GGGGGRGGYGGGDRGGRGGYGGDRGGRGGYGGGDRG-GRGG 711
Score = 27.5 bits (58), Expect = 8.7
Identities = 20/41 (48%), Positives = 20/41 (48%), Gaps = 3/41 (7%)
Frame = +3
Query: 168 GGG--AGRKFDANKRTGRGG-GAGFRSNRSGGVQRGRNRGG 281
GGG GR R GRGG G G R R GG R RGG
Sbjct: 681 GGGDRGGRGGYGGDRGGRGGYGGGDRGGR-GGYGGDRGRGG 720
>U52003-4|ABB51171.1| 771|Caenorhabditis elegans P granule
abnormality protein 1,isoform b protein.
Length = 771
Score = 30.7 bits (66), Expect = 0.94
Identities = 20/41 (48%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Frame = +3
Query: 168 GGGAGRK-FDANKRTGRGGGAGFRSNRS--GGVQRGRNRGG 281
GGG GR + R GRGG G R R GG RG RGG
Sbjct: 713 GGGGGRGGYGGGDRGGRGGYGGDRGGRGGYGGGDRG-GRGG 752
Score = 27.5 bits (58), Expect = 8.7
Identities = 20/41 (48%), Positives = 20/41 (48%), Gaps = 3/41 (7%)
Frame = +3
Query: 168 GGG--AGRKFDANKRTGRGG-GAGFRSNRSGGVQRGRNRGG 281
GGG GR R GRGG G G R R GG R RGG
Sbjct: 722 GGGDRGGRGGYGGDRGGRGGYGGGDRGGR-GGYGGDRGRGG 761
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 30.7 bits (66), Expect = 0.94
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Frame = +3
Query: 408 LLVSNLDFGVSDSDIKELFSEFG-ILKSASVHYD-RSGRSLGTADVVFERKADAVKAMKQ 581
+ V NLD V + + + FS FG IL+ + D SG S G A + F + A++
Sbjct: 112 IFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEA 171
Query: 582 YNGVPLDGRAMNIQLA 629
NG L RA+ + A
Sbjct: 172 MNGQFLCNRAITVSYA 187
>L25598-2|AAV58887.1| 780|Caenorhabditis elegans Calpain family
protein 1, isoform a protein.
Length = 780
Score = 30.7 bits (66), Expect = 0.94
Identities = 19/59 (32%), Positives = 24/59 (40%), Gaps = 2/59 (3%)
Frame = +3
Query: 111 DQIEMALDDII--KANKKTRIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 281
D I D+++ K K+ GG G G GGG GF N GG+ GG
Sbjct: 100 DLIGGIFDNVVNRKGKKEQDNYGGGGNYGGGGGNQGGGGGGGFNFNDIGGLINSMGGGG 158
>AF098992-4|AAK73869.2| 250|Caenorhabditis elegans Hypothetical
protein F53C3.6a protein.
Length = 250
Score = 30.7 bits (66), Expect = 0.94
Identities = 19/36 (52%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Frame = +3
Query: 180 GRKFDANKRTGRGGGAGFR--SNRSGGVQRGRNRGG 281
GR DA GRGGG G R S GGV GR GG
Sbjct: 16 GRNLDARGGRGRGGGGGGRGSSGARGGV-GGRGGGG 50
Score = 27.5 bits (58), Expect = 8.7
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +3
Query: 162 RIGGGAGRKFDANKRTGRGG-GAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHD 338
R GGG GR + R G GG G G R GG + G R + S +S+++ +
Sbjct: 27 RGGGGGGRG-SSGARGGVGGRGGGGRGGGGGGFRSGGARSSFS-SFRGGSSHYSSSFRQN 84
Query: 339 MFN 347
+F+
Sbjct: 85 VFH 87
>AF077868-1|AAC36100.1| 730|Caenorhabditis elegans PGL-1 protein.
Length = 730
Score = 30.7 bits (66), Expect = 0.94
Identities = 20/41 (48%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Frame = +3
Query: 168 GGGAGRK-FDANKRTGRGGGAGFRSNRS--GGVQRGRNRGG 281
GGG GR + R GRGG G R R GG RG RGG
Sbjct: 672 GGGGGRGGYGGGDRGGRGGYGGDRGGRGGYGGGDRG-GRGG 711
Score = 27.5 bits (58), Expect = 8.7
Identities = 20/41 (48%), Positives = 20/41 (48%), Gaps = 3/41 (7%)
Frame = +3
Query: 168 GGG--AGRKFDANKRTGRGG-GAGFRSNRSGGVQRGRNRGG 281
GGG GR R GRGG G G R R GG R RGG
Sbjct: 681 GGGDRGGRGGYGGDRGGRGGYGGGDRGGR-GGYGGDRGRGG 720
>U55857-6|AAA98032.2| 206|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 2 protein.
Length = 206
Score = 30.3 bits (65), Expect = 1.2
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Frame = +3
Query: 408 LLVSNLDFGVSDSDIKE----LFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAM 575
L ++NL+ + ++++ +F +FG + SV R+ + G A V+F+ A A
Sbjct: 10 LYINNLNEKIKIDELRKSLVAVFKQFGEI--VSVMCFRTLKMRGQAHVIFKELPAASAAR 67
Query: 576 KQYNGVPLDGRAMNIQLATSE 638
+ NG P + M IQ A +
Sbjct: 68 EALNGFPFYEKPMRIQFARED 88
>AL021173-1|CAE17951.1| 89|Caenorhabditis elegans Hypothetical
protein VK10D6R.1 protein.
Length = 89
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = +3
Query: 168 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRG 278
GGG G + N G GG G+R N GG+ RG G
Sbjct: 43 GGGYGYRPYGNGGYGSYGGYGYRPNPVGGMLRGALMG 79
>Z78413-7|CAB01657.1| 352|Caenorhabditis elegans Hypothetical
protein T01C3.7 protein.
Length = 352
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/40 (45%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Frame = +3
Query: 168 GGGAGRKFDANKRTGRGGG--AGFRSNRSGGVQRGRNRGG 281
GGG + R GGG GFR R GG RG RGG
Sbjct: 31 GGGGRGGYGGGDRGSFGGGDRGGFRGGRGGG-DRGGFRGG 69
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = +3
Query: 216 GGGAGFRSNRSGGVQRGRNRGG 281
GGG GFR R G RG +RGG
Sbjct: 10 GGGGGFRGGRGG--DRGGSRGG 29
>Z75552-4|CAA99942.1| 624|Caenorhabditis elegans Hypothetical
protein W04D2.4 protein.
Length = 624
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +3
Query: 168 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRN 272
GG R +KR GRG G NRSG V +N
Sbjct: 122 GGAHFRHKSGSKRRGRGKGIFLACNRSGNVSSDKN 156
>Z69787-12|CAM84810.1| 234|Caenorhabditis elegans Hypothetical
protein C44C10.9b protein.
Length = 234
Score = 29.9 bits (64), Expect = 1.6
Identities = 19/58 (32%), Positives = 23/58 (39%), Gaps = 5/58 (8%)
Frame = +3
Query: 180 GRKFDANKRTGR-----GGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHD 338
GRK++ R G G G RSGG G R S NY R N+ + D
Sbjct: 142 GRKYETGSRNGGYKNGYGNGRNLDVERSGGPDDGYRRREYAVSQNYLRRPSNNVYDSD 199
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/61 (24%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Frame = +3
Query: 312 DVNSTWKHDMFNDFGERKLQRNSGTITTGPTKL--LVSNLDFGVSDSDIKELFSEFGILK 485
D N K D R LQ+++ + L V N+ +++ ++ +FS+FG +
Sbjct: 111 DENKEGKRDRTKQRENRTLQKSNARASAAENALTVFVGNMPLTMNEKSVRRIFSDFGTIS 170
Query: 486 S 488
S
Sbjct: 171 S 171
>Z11505-10|CAA77588.2| 590|Caenorhabditis elegans Hypothetical
protein F59B2.11 protein.
Length = 590
Score = 29.9 bits (64), Expect = 1.6
Identities = 25/84 (29%), Positives = 35/84 (41%)
Frame = +3
Query: 147 ANKKTRIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNST 326
A K TR+ G + + N R GG G R R G R +N S N S G +
Sbjct: 89 AVKYTRLNDYRGDQVNGNTRKESSGGRGGRGGR-GRRPRPQNSESGEDSDNRSGGRRGQS 147
Query: 327 WKHDMFNDFGERKLQRNSGTITTG 398
+++ + E + RN IT G
Sbjct: 148 NQYE-DEETNEERYDRNGNRITRG 170
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 29.9 bits (64), Expect = 1.6
Identities = 19/78 (24%), Positives = 38/78 (48%)
Frame = +3
Query: 405 KLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQY 584
K+ V L + +++E+F FG ++ V + R G A V ++ DA A++
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWV----ARRPPGFAFVEYDDVRDAEDAVRAL 59
Query: 585 NGVPLDGRAMNIQLATSE 638
+G + G ++L+T +
Sbjct: 60 DGSRICGVRARVELSTGQ 77
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 29.9 bits (64), Expect = 1.6
Identities = 19/78 (24%), Positives = 38/78 (48%)
Frame = +3
Query: 405 KLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQY 584
K+ V L + +++E+F FG ++ V + R G A V ++ DA A++
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWV----ARRPPGFAFVEYDDVRDAEDAVRAL 59
Query: 585 NGVPLDGRAMNIQLATSE 638
+G + G ++L+T +
Sbjct: 60 DGSRICGVRARVELSTGQ 77
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 29.9 bits (64), Expect = 1.6
Identities = 19/78 (24%), Positives = 38/78 (48%)
Frame = +3
Query: 405 KLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQY 584
K+ V L + +++E+F FG ++ V + R G A V ++ DA A++
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWV----ARRPPGFAFVEYDDVRDAEDAVRAL 59
Query: 585 NGVPLDGRAMNIQLATSE 638
+G + G ++L+T +
Sbjct: 60 DGSRICGVRARVELSTGQ 77
Score = 28.7 bits (61), Expect = 3.8
Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Frame = +3
Query: 132 DDIIKANKKTRIGGGAGRK--FDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYS 305
+D ++A +RI G R +R G G G GF GG R RG +S + S
Sbjct: 53 EDAVRALDGSRICGVRARVELSTGQRRGGGGRGGGFGGRGGGGRDRSPYRGDRGRSRSRS 112
Query: 306 R 308
R
Sbjct: 113 R 113
>AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical
protein Y116A8C.35 protein.
Length = 285
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/48 (37%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Frame = +3
Query: 168 GGGAGRKFDANKRTGRGGGAGF-RSNRSGGVQRGRNRGGITKSTNYSR 308
GGG GR D G GGG G+ GG G GG +S + R
Sbjct: 235 GGGGGRDRDRGGWGGGGGGRGYGGGGGGGGYGYGGGGGGRRRSRSRDR 282
>Z95559-4|CAB09004.1| 110|Caenorhabditis elegans Hypothetical
protein Y41E3.8 protein.
Length = 110
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +3
Query: 216 GGGAGFRSNRSGGVQRGRNRGGITKST 296
GGG +R N GG GRN GG+ S+
Sbjct: 66 GGGNAYRRNGGGGGGGGRNIGGLPTSS 92
>Z81463-1|CAB03850.1| 342|Caenorhabditis elegans Hypothetical
protein C06B8.1 protein.
Length = 342
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/68 (23%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Frame = +3
Query: 258 QRGRNRGGITKSTNYSRGDVNSTWKH--DMFNDFGERKLQRNSGTITTGPTKLL-VSNLD 428
++G R + ST+ S GD++STWK ++F+ GE +++ + + K + + ++
Sbjct: 122 KKGTKRNALIVSTS-SAGDMDSTWKMVINLFSSLGELEIKDKTALLRNFMPKFIQIDSVP 180
Query: 429 FGVSDSDI 452
+ ++ D+
Sbjct: 181 YFAANIDV 188
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/53 (30%), Positives = 21/53 (39%)
Frame = +3
Query: 168 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNST 326
G G+G +G GG GF S +GG G G T + G+ T
Sbjct: 107 GFGSGNAGGTGFGSGNAGGTGFGSGNAGGTGLGSGNAG---GTGFGSGNAGGT 156
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +3
Query: 168 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGIT 287
G G+G +G GG GF S ++GG G + G T
Sbjct: 147 GFGSGNAGGTGFGSGNAGGTGFGSGKAGGTGFGSGKAGGT 186
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/55 (32%), Positives = 22/55 (40%), Gaps = 2/55 (3%)
Frame = +3
Query: 168 GGGAGRKFDANKRTGRG--GGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNST 326
G G G + R G G GG GF S +GG G G T + G+ T
Sbjct: 55 GSGFGGNNNVGPRFGNGNAGGTGFGSGNAGGTGFGSGNAG---GTGFGSGNAGGT 106
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/53 (30%), Positives = 21/53 (39%)
Frame = +3
Query: 168 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNST 326
G G+G +G GG GF S +GG G G T + G+ T
Sbjct: 77 GFGSGNAGGTGFGSGNAGGTGFGSGNAGGTGFGSGNAG---GTGFGSGNAGGT 126
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +3
Query: 150 NKKTRIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRG 278
N ++ GGG F G G G+G SN G G++RG
Sbjct: 211 NHESGFGGGKSGGFGGGNSGGSGFGSGGNSNGFGSGGGGQDRG 253
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/53 (30%), Positives = 20/53 (37%)
Frame = +3
Query: 168 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNST 326
G G+G +G GG GF S +GG G G T + G T
Sbjct: 127 GFGSGNAGGTGLGSGNAGGTGFGSGNAGGTGFGSGNAG---GTGFGSGKAGGT 176
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 168 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRN 272
G G+G +G+ GG GF S ++GG G N
Sbjct: 157 GFGSGNAGGTGFGSGKAGGTGFGSGKAGGTGFGGN 191
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = +3
Query: 207 TGRGGGAGFRSNRSGGVQRGRNRG-GITKSTNYSRG 311
+G GGG+GF S +GG G G G S N G
Sbjct: 22 SGFGGGSGFGSGNTGGFGSGNAGGTGFGSSNNGGSG 57
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/40 (35%), Positives = 17/40 (42%)
Frame = +3
Query: 168 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGIT 287
G G+G +G GG GF S +GG G G T
Sbjct: 97 GFGSGNAGGTGFGSGNAGGTGFGSGNAGGTGFGSGNAGGT 136
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/53 (30%), Positives = 21/53 (39%)
Frame = +3
Query: 168 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNST 326
G G+G +G GG GF S +GG G G T + G+ T
Sbjct: 107 GFGSGNAGGTGFGSGNAGGTGFGSGNAGGTGLGSGNAG---GTGFGSGNAGGT 156
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +3
Query: 168 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGIT 287
G G+G +G GG GF S ++GG G + G T
Sbjct: 147 GFGSGNAGGTGFGSGNAGGTGFGSGKAGGTGFGSGKAGGT 186
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/55 (32%), Positives = 22/55 (40%), Gaps = 2/55 (3%)
Frame = +3
Query: 168 GGGAGRKFDANKRTGRG--GGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNST 326
G G G + R G G GG GF S +GG G G T + G+ T
Sbjct: 55 GSGFGGNNNVGPRFGNGNAGGTGFGSGNAGGTGFGSGNAG---GTGFGSGNAGGT 106
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/53 (30%), Positives = 21/53 (39%)
Frame = +3
Query: 168 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNST 326
G G+G +G GG GF S +GG G G T + G+ T
Sbjct: 77 GFGSGNAGGTGFGSGNAGGTGFGSGNAGGTGFGSGNAG---GTGFGSGNAGGT 126
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +3
Query: 150 NKKTRIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRG 278
N ++ GGG F G G G+G SN G G++RG
Sbjct: 211 NHESGFGGGKSGGFGGGNSGGSGFGSGGNSNGFGSGGGGQDRG 253
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/53 (30%), Positives = 20/53 (37%)
Frame = +3
Query: 168 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNST 326
G G+G +G GG GF S +GG G G T + G T
Sbjct: 127 GFGSGNAGGTGLGSGNAGGTGFGSGNAGGTGFGSGNAG---GTGFGSGKAGGT 176
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 168 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRN 272
G G+G +G+ GG GF S ++GG G N
Sbjct: 157 GFGSGNAGGTGFGSGKAGGTGFGSGKAGGTGFGGN 191
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = +3
Query: 207 TGRGGGAGFRSNRSGGVQRGRNRG-GITKSTNYSRG 311
+G GGG+GF S +GG G G G S N G
Sbjct: 22 SGFGGGSGFGSGNTGGFGSGNAGGTGFGSSNNGGSG 57
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/40 (35%), Positives = 17/40 (42%)
Frame = +3
Query: 168 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGIT 287
G G+G +G GG GF S +GG G G T
Sbjct: 97 GFGSGNAGGTGFGSGNAGGTGFGSGNAGGTGFGSGNAGGT 136
>U39645-2|AAA80365.2| 638|Caenorhabditis elegans Hypothetical
protein C14F11.2 protein.
Length = 638
Score = 29.5 bits (63), Expect = 2.2
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = -3
Query: 550 LSNTTSAVPKDLPDRS*CTDALLRM-PNSENSSFISESDTPKSKLDTSSL 404
+ N S+VP LP + + L + P+ +N++ + +D KSKL +SSL
Sbjct: 359 VQNKISSVPSHLPTSNGGKENLRQSTPDEQNNNNNNNNDNEKSKLSSSSL 408
>AF078786-2|AAC26941.1| 889|Caenorhabditis elegans Hypothetical
protein M01G5.1 protein.
Length = 889
Score = 29.5 bits (63), Expect = 2.2
Identities = 19/47 (40%), Positives = 22/47 (46%)
Frame = +3
Query: 183 RKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNS 323
RKF + GR GG G R GG RGR R G ++ G NS
Sbjct: 835 RKFYPPRVRGRRGGRGRSGGRGGG--RGRERDGGSRGRGGRGGRGNS 879
Score = 27.5 bits (58), Expect = 8.7
Identities = 19/41 (46%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +3
Query: 180 GRKFDANKRTGRGGGAGFRSNRSGGVQRGR-NRGGITKSTN 299
GR+ + GRGGG G R GG RGR RGG S N
Sbjct: 844 GRRGGRGRSGGRGGGRG--RERDGG-SRGRGGRGGRGNSGN 881
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 29.5 bits (63), Expect = 2.2
Identities = 17/38 (44%), Positives = 18/38 (47%)
Frame = +3
Query: 168 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 281
GGG GR D+ G GGAG S GG G GG
Sbjct: 339 GGGGGRA-DSGGAAGGAGGAGGYSGGGGGGGGGAAAGG 375
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = +3
Query: 168 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 281
GG AG A +G GGG G + GG G GG
Sbjct: 348 GGAAGGAGGAGGYSGGGGGGGGGAAAGGGYNAGGGGGG 385
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 29.5 bits (63), Expect = 2.2
Identities = 19/56 (33%), Positives = 21/56 (37%)
Frame = +3
Query: 162 RIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTW 329
R GG+G N G GG G RS GG Q G GG + R W
Sbjct: 588 RYQGGSGNGGGGNGGGGGFGGGGQRSGGGGGFQSG--GGGGRQQQQQQRAQPQQDW 641
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +3
Query: 168 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGIT 287
G G+G +G GG GF S ++GG G + G T
Sbjct: 147 GFGSGNAGGTGFGSGNAGGTGFGSGKAGGTGFGSGKAGGT 186
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/55 (32%), Positives = 22/55 (40%), Gaps = 2/55 (3%)
Frame = +3
Query: 168 GGGAGRKFDANKRTGRG--GGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNST 326
G G G + R G G GG GF S +GG G G T + G+ T
Sbjct: 55 GSGFGGNNNVGPRFGNGNAGGTGFGSGNAGGTGFGSGNAG---GTGFGSGNAGGT 106
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +3
Query: 150 NKKTRIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRG 278
N ++ GGG F G G G+G SN G G++RG
Sbjct: 211 NHESGFGGGKSGGFGGGNSGGSGFGSGGNSNGFGSGGGGQDRG 253
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/53 (30%), Positives = 21/53 (39%)
Frame = +3
Query: 168 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNST 326
G G+G +G GG GF S +GG G G T + G+ T
Sbjct: 77 GFGSGNAGGTGFGSGNAGGTGFGSGNAGGTGFGSGNAG---GTGFGGGNAGGT 126
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/53 (30%), Positives = 20/53 (37%)
Frame = +3
Query: 168 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNST 326
G G+G +G GG GF S +GG G G T + G T
Sbjct: 127 GFGSGNAGGTGLGSGNAGGTGFGSGNAGGTGFGSGNAG---GTGFGSGKAGGT 176
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 168 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRN 272
G G+G +G+ GG GF S ++GG G N
Sbjct: 157 GFGSGNAGGTGFGSGKAGGTGFGSGKAGGTGFGGN 191
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/53 (30%), Positives = 20/53 (37%)
Frame = +3
Query: 168 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNST 326
G G+G G GG GF S +GG G G T + G+ T
Sbjct: 107 GFGSGNAGGTGFGGGNAGGTGFGSGNAGGTGLGSGNAG---GTGFGSGNAGGT 156
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = +3
Query: 207 TGRGGGAGFRSNRSGGVQRGRNRG-GITKSTNYSRG 311
+G GGG+GF S +GG G G G S N G
Sbjct: 22 SGFGGGSGFGSGNTGGFGSGNAGGTGFGSSNNGGSG 57
>Z50071-4|CAA90409.2| 1301|Caenorhabditis elegans Hypothetical protein
T07D4.3 protein.
Length = 1301
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = +3
Query: 210 GRGGGAGFRSNRSGGVQRGRNRGGITKSTNYS 305
G GGG G+R R G RG RGG + N S
Sbjct: 1271 GAGGGGGYRGGRGG---RGGGRGGGGRGWNAS 1299
>Z34533-2|CAA84296.1| 166|Caenorhabditis elegans Hypothetical
protein B0285.3 protein.
Length = 166
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +3
Query: 189 FDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITK 290
F N R G GGG G ++N RGR RGG +
Sbjct: 72 FRGNYRGGGGGGGGNQNNYGN---RGRGRGGFDR 102
Score = 27.5 bits (58), Expect = 8.7
Identities = 19/54 (35%), Positives = 24/54 (44%)
Frame = +3
Query: 168 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTW 329
GGG G + + R GRG G GF R GG +N G I + N+ W
Sbjct: 81 GGGGGNQNNYGNR-GRGRG-GFDRGRGGGGGGNKNFGPIDANKCIIPSMWNNPW 132
>AF067211-9|AAC16994.1| 120|Caenorhabditis elegans Hypothetical
protein B0205.8 protein.
Length = 120
Score = 28.7 bits (61), Expect = 3.8
Identities = 18/43 (41%), Positives = 21/43 (48%), Gaps = 5/43 (11%)
Frame = +3
Query: 168 GGGAGRKFDANKRTGRGG----GAGFRSNRSGGVQ-RGRNRGG 281
GGG G + + RGG G G R GG Q RG +RGG
Sbjct: 54 GGGRGGGYQHRDNSNRGGWVPRGGGQRGGYRGGWQDRGGHRGG 96
>AC006605-3|AAK85442.1| 933|Caenorhabditis elegans Hypothetical
protein C07H6.4 protein.
Length = 933
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +3
Query: 402 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRS 512
T + VSN+ V++ D+ F FG L + + Y RS
Sbjct: 200 TNVYVSNIPHSVTEDDLLFTFGSFGPLAALKILYPRS 236
>Z99278-4|CAB16492.1| 871|Caenorhabditis elegans Hypothetical
protein Y53C12B.3b protein.
Length = 871
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = +3
Query: 168 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRG 278
G GR + +GRGGG G S GG G RG
Sbjct: 828 GSYRGRSSGGSGGSGRGGGRGGYSRGHGGGSGGGQRG 864
>Z99278-3|CAB16493.1| 867|Caenorhabditis elegans Hypothetical
protein Y53C12B.3a protein.
Length = 867
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = +3
Query: 168 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRG 278
G GR + +GRGGG G S GG G RG
Sbjct: 825 GSYRGRSSGGSGGSGRGGGRGGYSRGHGGGSGGGQRG 861
>Z46787-3|CAA86741.1| 1032|Caenorhabditis elegans Hypothetical
protein C16C10.3 protein.
Length = 1032
Score = 28.3 bits (60), Expect = 5.0
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Frame = +3
Query: 147 ANKKTRIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQ-RG--RNRGGITKSTNYSRG 311
+NK + + GG G + + R G+R RS RG NRGG + + SRG
Sbjct: 296 SNKLSEMKGGGGGRGGYGRSDSRDSRGGYRGGRSDSRDFRGVYGNRGGNDRYRDESRG 353
>U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical
protein F07C4.7 protein.
Length = 180
Score = 28.3 bits (60), Expect = 5.0
Identities = 18/40 (45%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Frame = +3
Query: 168 GGGAGRK--FDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 281
GGG G FD N GRGG G R G G RGG
Sbjct: 99 GGGRGGNGGFDDNGG-GRGGNGGGRGGTGGFGDNGGGRGG 137
>U20864-9|AAC46661.1| 123|Caenorhabditis elegans Lsm sm-like
protein protein 4 protein.
Length = 123
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = +3
Query: 183 RKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 281
R+ + GRGGG G R GG G NRGG
Sbjct: 89 RQQQREQSRGRGGGRGGRGGHRGG---GGNRGG 118
>AL110490-3|CAB54449.1| 892|Caenorhabditis elegans Hypothetical
protein Y48B6A.3 protein.
Length = 892
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 4/44 (9%)
Frame = +3
Query: 162 RIGGGAGRKFDAN----KRTGRGGGAGFRSNRSGGVQRGRNRGG 281
R GGG G + N +R G GGG G+ + G G GG
Sbjct: 767 RGGGGGGGGYRGNSYDDRRGGGGGGGGYNDRQDFGRNYGGRDGG 810
>AL110485-18|CAB60366.1| 108|Caenorhabditis elegans Hypothetical
protein Y46G5A.23 protein.
Length = 108
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = +3
Query: 168 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRG 266
GGG GR+ R G GGG +R GG RG
Sbjct: 68 GGGGGRRHHRGHRHG-GGGHRHGGHRGGGGGRG 99
>Z69302-6|CAL36504.1| 472|Caenorhabditis elegans Hypothetical
protein F40F8.11 protein.
Length = 472
Score = 27.9 bits (59), Expect = 6.6
Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = +3
Query: 162 RIGGGAGRKFDANKRTGRGGGAGF-RSNRSGGVQRG-RNRGG 281
R+ G + +T RGGG G R SGG RG NRGG
Sbjct: 151 RLEGNSWETNGLQNQTARGGGGGRGRGRGSGGRGRGGFNRGG 192
>U23484-7|ABB88232.1| 738|Caenorhabditis elegans Hypothetical
protein EEED8.10a protein.
Length = 738
Score = 27.9 bits (59), Expect = 6.6
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 11/67 (16%)
Frame = +3
Query: 405 KLLVSNLDFGVSDSDIKELFSEFGIL---------KSASVH--YDRSGRSLGTADVVFER 551
K++VSN+ V+ S ++ FS++G + K SV + R+ GTA + F++
Sbjct: 113 KIVVSNISAKVTQSQLQSFFSQYGKITSCILPREEKKTSVFGTLPKHSRNCGTATITFKK 172
Query: 552 KADAVKA 572
A +A
Sbjct: 173 SEHADRA 179
>AL161712-14|CAC35895.1| 286|Caenorhabditis elegans Hypothetical
protein Y66D12A.18 protein.
Length = 286
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Frame = +3
Query: 180 GRKFDANKRTGRGGGAGFRSNRSGGVQRG--RNR 275
G +F R GRGGG G R + + G RNR
Sbjct: 251 GGRFGGGSRRGRGGGGGGRRGENDSARGGNWRNR 284
>AF104858-1|AAC79090.1| 390|Caenorhabditis elegans putative
RNA-binding protein PRP-1 protein.
Length = 390
Score = 27.9 bits (59), Expect = 6.6
Identities = 22/55 (40%), Positives = 27/55 (49%)
Frame = +3
Query: 144 KANKKTRIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSR 308
K KK G R F A GRGGG GF +R G RGR+ G +S + +R
Sbjct: 85 KEKKKPEEGSYNNRGFVAR---GRGGGTGF-VDRGG---RGRSNGAPRESRDNNR 132
>AF063007-5|AAD47125.1| 712|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 59
protein.
Length = 712
Score = 27.9 bits (59), Expect = 6.6
Identities = 22/55 (40%), Positives = 27/55 (49%)
Frame = +3
Query: 144 KANKKTRIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSR 308
K KK G R F A GRGGG GF +R G RGR+ G +S + +R
Sbjct: 85 KEKKKPEEGSYNNRGFVAR---GRGGGTGF-VDRGG---RGRSNGAPRESRDNNR 132
>AF067611-1|AAC19182.1| 603|Caenorhabditis elegans Hypothetical
protein C45G7.4 protein.
Length = 603
Score = 27.5 bits (58), Expect = 8.7
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = -1
Query: 399 DQLLWSHCFFEVSSHQNH*TYHVSKCCSHHPSNSW*ISLCLHDFYLVV 256
D L+ FEV +H+N + C H+ S SLCLH Y ++
Sbjct: 19 DSLITCEVCFEVFNHENRPPKLLP--CGHNFCESCIFSLCLHQEYYLL 64
>AF022982-4|AAB69938.1| 296|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 22 protein.
Length = 296
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +3
Query: 438 SDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQYNGVPL 599
S+ DI++LFS FGI+ S ++ R + FE A+A A + P+
Sbjct: 196 SEDDIRKLFSTFGIISHISSAIEKKDRRKRILE--FESGANAWGAELETGNAPM 247
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,046,058
Number of Sequences: 27780
Number of extensions: 327538
Number of successful extensions: 1716
Number of sequences better than 10.0: 129
Number of HSP's better than 10.0 without gapping: 1106
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1554
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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