Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt9k08
(723 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC019912-1|AAH19912.1| 243|Homo sapiens peptide deformylase (mi... 156 7e-38
AF322879-1|AAK15624.1| 243|Homo sapiens polypeptide deformylase... 156 7e-38
AF239156-1|AAG33968.1| 243|Homo sapiens peptide deformylase-lik... 156 7e-38
EF657355-13|ABR94591.1| 378|Homo sapiens cytochrome b protein. 31 4.2
EU007879-13|ABS58265.1| 380|Homo sapiens cytochrome b protein. 30 9.6
EU007861-13|ABS58031.1| 380|Homo sapiens cytochrome b protein. 30 9.6
EU007839-13|ABS57745.1| 380|Homo sapiens cytochrome b protein. 30 9.6
DQ462234-13|ABD98734.1| 378|Homo sapiens cytochrome b protein. 30 9.6
DQ272122-13|ABB51449.1| 378|Homo sapiens cytochrome b protein. 30 9.6
AY615360-13|AAT37891.1| 378|Homo sapiens cytochrome b protein. 30 9.6
AY570526-13|AAS83354.1| 378|Homo sapiens cytochrome b protein. 30 9.6
AY519490-13|AAR91296.1| 378|Homo sapiens cytochrome b protein. 30 9.6
AY519487-13|AAR91257.1| 378|Homo sapiens cytochrome b protein. 30 9.6
AY519485-13|AAR91231.1| 378|Homo sapiens cytochrome b protein. 30 9.6
AY289067-13|AAP48100.1| 378|Homo sapiens cytochrome b protein. 30 9.6
AY289066-13|AAP48087.1| 378|Homo sapiens cytochrome b protein. 30 9.6
AY255174-13|AAO67162.1| 378|Homo sapiens cytochrome b protein. 30 9.6
AY243933-2|AAP72489.1| 378|Homo sapiens cytochrome b protein. 30 9.6
AY195772-13|AAO88643.2| 378|Homo sapiens cytochrome b protein. 30 9.6
AY195763-13|AAO88526.1| 378|Homo sapiens cytochrome b protein. 30 9.6
AY195753-13|AAO88396.2| 378|Homo sapiens cytochrome b protein. 30 9.6
AF346991-13|AAK17583.2| 378|Homo sapiens cytochrome b protein. 30 9.6
AF346979-13|AAK17427.1| 378|Homo sapiens cytochrome b protein. 30 9.6
AF346970-13|AAK17310.2| 378|Homo sapiens cytochrome b protein. 30 9.6
>BC019912-1|AAH19912.1| 243|Homo sapiens peptide deformylase
(mitochondrial) protein.
Length = 243
Score = 156 bits (379), Expect = 7e-38
Identities = 78/181 (43%), Positives = 109/181 (60%)
Frame = +3
Query: 147 PPYNHVVQVGDPTLRKVSEPVPIENIKTKEIQTLILKLRFVMNKYKSVGMSAPQIGVNMR 326
PP++HV QVGDP LR V+ PV + E+Q L +L VM + + VG+SAPQ+GV +
Sbjct: 62 PPFSHVCQVGDPVLRGVAAPVERAQLGGPELQRLTQRLVQVMRRRRCVGLSAPQLGVPRQ 121
Query: 327 IFVMQLNPLQLANVPQAIVKSRGMEVIPFTVFVNPTLKVLNYNKVILSEGCESVQGYTAD 506
+ ++L P R ME P VFVNP+L+VL+ V EGCESV G+ A
Sbjct: 122 VLALELPEALCRECPPRQRALRQMEPFPLRVFVNPSLRVLDSRLVTFPEGCESVAGFLAC 181
Query: 507 VPRYKEIQISGYNEDGNPTSNTYRDWAARVAQHEIEHLDGKLYVDIMDRKTMSCVCWEEV 686
VPR++ +QISG + +G WAAR+ QHE++HL G L++D MD +T + V W +V
Sbjct: 182 VPRFQAVQISGLDPNGEQVVWQASGWAARIIQHEMDHLQGCLFIDKMDSRTFTNVYWMKV 241
Query: 687 N 689
N
Sbjct: 242 N 242
>AF322879-1|AAK15624.1| 243|Homo sapiens polypeptide
deformylase-like protein protein.
Length = 243
Score = 156 bits (379), Expect = 7e-38
Identities = 78/181 (43%), Positives = 109/181 (60%)
Frame = +3
Query: 147 PPYNHVVQVGDPTLRKVSEPVPIENIKTKEIQTLILKLRFVMNKYKSVGMSAPQIGVNMR 326
PP++HV QVGDP LR V+ PV + E+Q L +L VM + + VG+SAPQ+GV +
Sbjct: 62 PPFSHVCQVGDPVLRGVAAPVERAQLGGPELQRLTQRLVQVMRRRRCVGLSAPQLGVPRQ 121
Query: 327 IFVMQLNPLQLANVPQAIVKSRGMEVIPFTVFVNPTLKVLNYNKVILSEGCESVQGYTAD 506
+ ++L P R ME P VFVNP+L+VL+ V EGCESV G+ A
Sbjct: 122 VLALELPEALCRECPPRQRALRQMEPFPLRVFVNPSLRVLDSRLVTFPEGCESVAGFLAC 181
Query: 507 VPRYKEIQISGYNEDGNPTSNTYRDWAARVAQHEIEHLDGKLYVDIMDRKTMSCVCWEEV 686
VPR++ +QISG + +G WAAR+ QHE++HL G L++D MD +T + V W +V
Sbjct: 182 VPRFQAVQISGLDPNGEQVVWQASGWAARIIQHEMDHLQGCLFIDKMDSRTFTNVYWMKV 241
Query: 687 N 689
N
Sbjct: 242 N 242
>AF239156-1|AAG33968.1| 243|Homo sapiens peptide deformylase-like
protein protein.
Length = 243
Score = 156 bits (379), Expect = 7e-38
Identities = 78/181 (43%), Positives = 109/181 (60%)
Frame = +3
Query: 147 PPYNHVVQVGDPTLRKVSEPVPIENIKTKEIQTLILKLRFVMNKYKSVGMSAPQIGVNMR 326
PP++HV QVGDP LR V+ PV + E+Q L +L VM + + VG+SAPQ+GV +
Sbjct: 62 PPFSHVCQVGDPVLRGVAAPVERAQLGGPELQRLTQRLVQVMRRRRCVGLSAPQLGVPRQ 121
Query: 327 IFVMQLNPLQLANVPQAIVKSRGMEVIPFTVFVNPTLKVLNYNKVILSEGCESVQGYTAD 506
+ ++L P R ME P VFVNP+L+VL+ V EGCESV G+ A
Sbjct: 122 VLALELPEALCRECPPRQRALRQMEPFPLRVFVNPSLRVLDSRLVTFPEGCESVAGFLAC 181
Query: 507 VPRYKEIQISGYNEDGNPTSNTYRDWAARVAQHEIEHLDGKLYVDIMDRKTMSCVCWEEV 686
VPR++ +QISG + +G WAAR+ QHE++HL G L++D MD +T + V W +V
Sbjct: 182 VPRFQAVQISGLDPNGEQVVWQASGWAARIIQHEMDHLQGCLFIDKMDSRTFTNVYWMKV 241
Query: 687 N 689
N
Sbjct: 242 N 242
>EF657355-13|ABR94591.1| 378|Homo sapiens cytochrome b protein.
Length = 378
Score = 31.1 bits (67), Expect = 4.2
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = -3
Query: 445 KTFNVGLTNTVNGITSMPLDLTIAWGTLASCNGFSCITNILIFTPICGADI 293
KT+N+G+ + +T+ + + WG + S G + ITN+L P G D+
Sbjct: 111 KTWNIGIILLLATMTTAFMGYVLPWGQM-SFWGATVITNLLSAIPYIGTDL 160
>EU007879-13|ABS58265.1| 380|Homo sapiens cytochrome b protein.
Length = 380
Score = 29.9 bits (64), Expect = 9.6
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = -3
Query: 445 KTFNVGLTNTVNGITSMPLDLTIAWGTLASCNGFSCITNILIFTPICGADI 293
+T+N+G+ + + + + + WG + S G + ITN+L TP G D+
Sbjct: 111 ETWNIGIILLLATMATAFMGYVLPWGQM-SFWGATVITNLLSATPYIGTDL 160
>EU007861-13|ABS58031.1| 380|Homo sapiens cytochrome b protein.
Length = 380
Score = 29.9 bits (64), Expect = 9.6
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = -3
Query: 445 KTFNVGLTNTVNGITSMPLDLTIAWGTLASCNGFSCITNILIFTPICGADI 293
+T+N+G+ + + + + + WG + S G + ITN+L TP G D+
Sbjct: 111 ETWNIGIILLLATMATAFMGYVLPWGQM-SFWGATVITNLLSATPYIGTDL 160
>EU007839-13|ABS57745.1| 380|Homo sapiens cytochrome b protein.
Length = 380
Score = 29.9 bits (64), Expect = 9.6
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = -3
Query: 445 KTFNVGLTNTVNGITSMPLDLTIAWGTLASCNGFSCITNILIFTPICGADI 293
+T+N+G+ + + + + + WG + S G + ITN+L TP G D+
Sbjct: 111 ETWNIGIILLLATMATAFMGYVLPWGQM-SFWGATVITNLLSATPYIGTDL 160
>DQ462234-13|ABD98734.1| 378|Homo sapiens cytochrome b protein.
Length = 378
Score = 29.9 bits (64), Expect = 9.6
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = -3
Query: 445 KTFNVGLTNTVNGITSMPLDLTIAWGTLASCNGFSCITNILIFTPICGADI 293
+T+N+G+ + + + + + WG + S G + ITN+L TP G D+
Sbjct: 111 ETWNIGIILLLATMATAFMGYVLPWGQM-SFWGATVITNLLSATPYIGTDL 160
>DQ272122-13|ABB51449.1| 378|Homo sapiens cytochrome b protein.
Length = 378
Score = 29.9 bits (64), Expect = 9.6
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = -3
Query: 445 KTFNVGLTNTVNGITSMPLDLTIAWGTLASCNGFSCITNILIFTPICGADI 293
+T+N+G+ + + + + + WG + S G + ITN+L TP G D+
Sbjct: 111 ETWNIGIILLLATMATAFMGYVLPWGQM-SFWGATVITNLLSATPYIGTDL 160
>AY615360-13|AAT37891.1| 378|Homo sapiens cytochrome b protein.
Length = 378
Score = 29.9 bits (64), Expect = 9.6
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = -3
Query: 445 KTFNVGLTNTVNGITSMPLDLTIAWGTLASCNGFSCITNILIFTPICGADI 293
+T+N+G+ + + + + + WG + S G + ITN+L TP G D+
Sbjct: 111 ETWNIGIILLLATMATAFMGYVLPWGQM-SFWGATVITNLLSATPYIGTDL 160
>AY570526-13|AAS83354.1| 378|Homo sapiens cytochrome b protein.
Length = 378
Score = 29.9 bits (64), Expect = 9.6
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = -3
Query: 445 KTFNVGLTNTVNGITSMPLDLTIAWGTLASCNGFSCITNILIFTPICGADI 293
+T+N+G+ + + + + + WG + S G + ITN+L TP G D+
Sbjct: 111 ETWNIGIILLLATMATAFMGYVLPWGQM-SFWGATVITNLLSATPYIGTDL 160
>AY519490-13|AAR91296.1| 378|Homo sapiens cytochrome b protein.
Length = 378
Score = 29.9 bits (64), Expect = 9.6
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = -3
Query: 445 KTFNVGLTNTVNGITSMPLDLTIAWGTLASCNGFSCITNILIFTPICGADI 293
+T+N+G+ + + + + + WG + S G + ITN+L TP G D+
Sbjct: 111 ETWNIGIILLLATMATAFMGYVLPWGQM-SFWGATVITNLLSATPYIGTDL 160
>AY519487-13|AAR91257.1| 378|Homo sapiens cytochrome b protein.
Length = 378
Score = 29.9 bits (64), Expect = 9.6
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = -3
Query: 445 KTFNVGLTNTVNGITSMPLDLTIAWGTLASCNGFSCITNILIFTPICGADI 293
+T+N+G+ + + + + + WG + S G + ITN+L TP G D+
Sbjct: 111 ETWNIGIILLLATMATAFMGYVLPWGQM-SFWGATVITNLLSATPYIGTDL 160
>AY519485-13|AAR91231.1| 378|Homo sapiens cytochrome b protein.
Length = 378
Score = 29.9 bits (64), Expect = 9.6
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = -3
Query: 445 KTFNVGLTNTVNGITSMPLDLTIAWGTLASCNGFSCITNILIFTPICGADI 293
+T+N+G+ + + + + + WG + S G + ITN+L TP G D+
Sbjct: 111 ETWNIGIILLLATMATAFMGYVLPWGQM-SFWGATVITNLLSATPYIGTDL 160
>AY289067-13|AAP48100.1| 378|Homo sapiens cytochrome b protein.
Length = 378
Score = 29.9 bits (64), Expect = 9.6
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = -3
Query: 445 KTFNVGLTNTVNGITSMPLDLTIAWGTLASCNGFSCITNILIFTPICGADI 293
+T+N+G+ + + + + + WG + S G + ITN+L TP G D+
Sbjct: 111 ETWNIGIILLLATMATAFMGYVLPWGQM-SFWGATVITNLLSATPYIGTDL 160
>AY289066-13|AAP48087.1| 378|Homo sapiens cytochrome b protein.
Length = 378
Score = 29.9 bits (64), Expect = 9.6
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = -3
Query: 445 KTFNVGLTNTVNGITSMPLDLTIAWGTLASCNGFSCITNILIFTPICGADI 293
+T+N+G+ + + + + + WG + S G + ITN+L TP G D+
Sbjct: 111 ETWNIGIILLLATMATAFMGYVLPWGQM-SFWGATVITNLLSATPYIGTDL 160
>AY255174-13|AAO67162.1| 378|Homo sapiens cytochrome b protein.
Length = 378
Score = 29.9 bits (64), Expect = 9.6
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = -3
Query: 445 KTFNVGLTNTVNGITSMPLDLTIAWGTLASCNGFSCITNILIFTPICGADI 293
+T+N+G+ + + + + + WG + S G + ITN+L TP G D+
Sbjct: 111 ETWNIGIILLLATMATAFMGYVLPWGQM-SFWGATVITNLLSATPYIGTDL 160
>AY243933-2|AAP72489.1| 378|Homo sapiens cytochrome b protein.
Length = 378
Score = 29.9 bits (64), Expect = 9.6
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = -3
Query: 445 KTFNVGLTNTVNGITSMPLDLTIAWGTLASCNGFSCITNILIFTPICGADI 293
+T+N+G+ + + + + + WG + S G + ITN+L TP G D+
Sbjct: 111 ETWNIGIILLLATMATAFMGYVLPWGQM-SFWGATVITNLLSATPYIGTDL 160
>AY195772-13|AAO88643.2| 378|Homo sapiens cytochrome b protein.
Length = 378
Score = 29.9 bits (64), Expect = 9.6
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = -3
Query: 445 KTFNVGLTNTVNGITSMPLDLTIAWGTLASCNGFSCITNILIFTPICGADI 293
+T+N+G+ + + + + + WG + S G + ITN+L TP G D+
Sbjct: 111 ETWNIGIILLLATMATAFMGYVLPWGQM-SFWGATVITNLLSATPYIGTDL 160
>AY195763-13|AAO88526.1| 378|Homo sapiens cytochrome b protein.
Length = 378
Score = 29.9 bits (64), Expect = 9.6
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = -3
Query: 445 KTFNVGLTNTVNGITSMPLDLTIAWGTLASCNGFSCITNILIFTPICGADI 293
+T+N+G+ + + + + + WG + S G + ITN+L TP G D+
Sbjct: 111 ETWNIGIILLLATMATAFMGYVLPWGQM-SFWGATVITNLLSATPYIGTDL 160
>AY195753-13|AAO88396.2| 378|Homo sapiens cytochrome b protein.
Length = 378
Score = 29.9 bits (64), Expect = 9.6
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = -3
Query: 445 KTFNVGLTNTVNGITSMPLDLTIAWGTLASCNGFSCITNILIFTPICGADI 293
+T+N+G+ + + + + + WG + S G + ITN+L TP G D+
Sbjct: 111 ETWNIGIILLLATMATAFMGYVLPWGQM-SFWGATVITNLLSATPYIGTDL 160
>AF346991-13|AAK17583.2| 378|Homo sapiens cytochrome b protein.
Length = 378
Score = 29.9 bits (64), Expect = 9.6
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = -3
Query: 445 KTFNVGLTNTVNGITSMPLDLTIAWGTLASCNGFSCITNILIFTPICGADI 293
+T+N+G+ + + + + + WG + S G + ITN+L TP G D+
Sbjct: 111 ETWNIGIILLLATMATAFMGYVLPWGQM-SFWGATVITNLLSATPYIGTDL 160
>AF346979-13|AAK17427.1| 378|Homo sapiens cytochrome b protein.
Length = 378
Score = 29.9 bits (64), Expect = 9.6
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = -3
Query: 445 KTFNVGLTNTVNGITSMPLDLTIAWGTLASCNGFSCITNILIFTPICGADI 293
+T+N+G+ + + + + + WG + S G + ITN+L TP G D+
Sbjct: 111 ETWNIGIILLLATMATAFMGYVLPWGQM-SFWGATVITNLLSATPYIGTDL 160
>AF346970-13|AAK17310.2| 378|Homo sapiens cytochrome b protein.
Length = 378
Score = 29.9 bits (64), Expect = 9.6
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = -3
Query: 445 KTFNVGLTNTVNGITSMPLDLTIAWGTLASCNGFSCITNILIFTPICGADI 293
+T+N+G+ + + + + + WG + S G + ITN+L TP G D+
Sbjct: 111 ETWNIGIILLLATMATAFMGYVLPWGQM-SFWGATVITNLLSATPYIGTDL 160
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,476,956
Number of Sequences: 237096
Number of extensions: 2350445
Number of successful extensions: 4042
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 3898
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4042
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8511181328
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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