Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt9k08
         (723 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT015988-1|AAV36873.1|  238|Drosophila melanogaster RE57173p pro...   204   7e-53
AE014297-1176|AAF54540.2|  238|Drosophila melanogaster CG31278-P...   204   7e-53
BT022698-1|AAY55114.1|  206|Drosophila melanogaster IP07194p pro...   178   7e-45
AE014297-1177|AAN13481.1|  196|Drosophila melanogaster CG31373-P...   176   2e-44
AY119153-1|AAM51013.1|  724|Drosophila melanogaster RE62284p pro...    31   1.2  
AF417860-1|AAL38511.1|  724|Drosophila melanogaster PH domain pr...    31   1.2  
AE014134-2158|AAF53164.1|  724|Drosophila melanogaster CG5336-PA...    31   1.2  

>BT015988-1|AAV36873.1|  238|Drosophila melanogaster RE57173p
           protein.
          Length = 238

 Score =  204 bits (499), Expect = 7e-53
 Identities = 88/204 (43%), Positives = 135/204 (66%)
 Frame = +3

Query: 108 WYARLSPKHGVSLPPYNHVVQVGDPTLRKVSEPVPIENIKTKEIQTLILKLRFVMNKYKS 287
           WY  L      +LPPYNH  Q+GDP LR+ +  VP E++ + EI+ ++ ++  V+ K+  
Sbjct: 33  WYQHLWTTERTNLPPYNHFTQIGDPVLRQQAALVPKEHMASPEIKAIVERMVKVLRKFDC 92

Query: 288 VGMSAPQIGVNMRIFVMQLNPLQLANVPQAIVKSRGMEVIPFTVFVNPTLKVLNYNKVIL 467
           VG++APQIGV++RI  M+        +P+A+ ++R M  +P T+F+NP L V NY K+  
Sbjct: 93  VGIAAPQIGVSLRIIAMEFKGRIRKELPEAVYQARQMSELPLTIFINPVLTVTNYAKLKH 152

Query: 468 SEGCESVQGYTADVPRYKEIQISGYNEDGNPTSNTYRDWAARVAQHEIEHLDGKLYVDIM 647
            EGC SV+GY+A+V R++ ++++G ++ GN +      W AR+AQHE++HL+GKLY D M
Sbjct: 153 PEGCMSVRGYSAEVERFEGVKLTGLDQLGNQSELALSGWNARIAQHEMDHLEGKLYTDHM 212

Query: 648 DRKTMSCVCWEEVNLSKGKLAIPF 719
           DR T +C CWE VN   G++ IPF
Sbjct: 213 DRSTFACTCWEAVNTKSGRVEIPF 236


>AE014297-1176|AAF54540.2|  238|Drosophila melanogaster CG31278-PA
           protein.
          Length = 238

 Score =  204 bits (499), Expect = 7e-53
 Identities = 88/204 (43%), Positives = 135/204 (66%)
 Frame = +3

Query: 108 WYARLSPKHGVSLPPYNHVVQVGDPTLRKVSEPVPIENIKTKEIQTLILKLRFVMNKYKS 287
           WY  L      +LPPYNH  Q+GDP LR+ +  VP E++ + EI+ ++ ++  V+ K+  
Sbjct: 33  WYQHLWTTERTNLPPYNHFTQIGDPVLRQQAALVPKEHMASPEIKAIVERMVKVLRKFDC 92

Query: 288 VGMSAPQIGVNMRIFVMQLNPLQLANVPQAIVKSRGMEVIPFTVFVNPTLKVLNYNKVIL 467
           VG++APQIGV++RI  M+        +P+A+ ++R M  +P T+F+NP L V NY K+  
Sbjct: 93  VGIAAPQIGVSLRIIAMEFKGRIRKELPEAVYQARQMSELPLTIFINPVLTVTNYAKLKH 152

Query: 468 SEGCESVQGYTADVPRYKEIQISGYNEDGNPTSNTYRDWAARVAQHEIEHLDGKLYVDIM 647
            EGC SV+GY+A+V R++ ++++G ++ GN +      W AR+AQHE++HL+GKLY D M
Sbjct: 153 PEGCMSVRGYSAEVERFEGVKLTGLDQLGNQSELALSGWNARIAQHEMDHLEGKLYTDHM 212

Query: 648 DRKTMSCVCWEEVNLSKGKLAIPF 719
           DR T +C CWE VN   G++ IPF
Sbjct: 213 DRSTFACTCWEAVNTKSGRVEIPF 236


>BT022698-1|AAY55114.1|  206|Drosophila melanogaster IP07194p
           protein.
          Length = 206

 Score =  178 bits (433), Expect = 7e-45
 Identities = 80/200 (40%), Positives = 126/200 (63%)
 Frame = +3

Query: 120 LSPKHGVSLPPYNHVVQVGDPTLRKVSEPVPIENIKTKEIQTLILKLRFVMNKYKSVGMS 299
           L P   +S PPY H  Q+GDP LR+ +E VP E+I ++EI  +I  +  V+  Y  VG++
Sbjct: 5   LLPTRIMSAPPYRHFTQIGDPVLRQRAEEVPPEDIDSREINQIIDGMVKVLRHYDCVGVA 64

Query: 300 APQIGVNMRIFVMQLNPLQLANVPQAIVKSRGMEVIPFTVFVNPTLKVLNYNKVILSEGC 479
           APQ+G+ +RI VM+    +       I + R M ++P  VF+NP L++++       EGC
Sbjct: 65  APQVGIPLRIIVMEFREGKQEQFKPEIYEERKMSILPLAVFINPELEIISSQVNKHPEGC 124

Query: 480 ESVQGYTADVPRYKEIQISGYNEDGNPTSNTYRDWAARVAQHEIEHLDGKLYVDIMDRKT 659
            SV+GY+A+V RY +++I G  + G P+      W AR+AQHE++HL+G +Y+D MD  T
Sbjct: 125 MSVRGYSAEVERYDKVRIRGIGKLGTPSEMELEGWNARIAQHEVDHLNGTIYMDRMDLST 184

Query: 660 MSCVCWEEVNLSKGKLAIPF 719
            +C+ WE++N ++G+ AI F
Sbjct: 185 FNCILWEQINAAEGRSAIWF 204


>AE014297-1177|AAN13481.1|  196|Drosophila melanogaster CG31373-PA
           protein.
          Length = 196

 Score =  176 bits (429), Expect = 2e-44
 Identities = 78/194 (40%), Positives = 124/194 (63%)
 Frame = +3

Query: 138 VSLPPYNHVVQVGDPTLRKVSEPVPIENIKTKEIQTLILKLRFVMNKYKSVGMSAPQIGV 317
           +S PPY H  Q+GDP LR+ +E VP E+I ++EI  +I  +  V+  Y  VG++APQ+G+
Sbjct: 1   MSAPPYRHFTQIGDPVLRQRAEEVPPEDIDSREINQIIDGMVKVLRHYDCVGVAAPQVGI 60

Query: 318 NMRIFVMQLNPLQLANVPQAIVKSRGMEVIPFTVFVNPTLKVLNYNKVILSEGCESVQGY 497
            +RI VM+    +       I + R M ++P  VF+NP L++++       EGC SV+GY
Sbjct: 61  PLRIIVMEFREGKQEQFKPEIYEERKMSILPLAVFINPELEIISSQVNKHPEGCMSVRGY 120

Query: 498 TADVPRYKEIQISGYNEDGNPTSNTYRDWAARVAQHEIEHLDGKLYVDIMDRKTMSCVCW 677
           +A+V RY +++I G  + G P+      W AR+AQHE++HL+G +Y+D MD  T +C+ W
Sbjct: 121 SAEVERYDKVRIRGIGKLGTPSEMELEGWNARIAQHEVDHLNGTIYMDRMDLSTFNCILW 180

Query: 678 EEVNLSKGKLAIPF 719
           E++N ++G+ AI F
Sbjct: 181 EQINAAEGRSAIWF 194


>AY119153-1|AAM51013.1|  724|Drosophila melanogaster RE62284p
           protein.
          Length = 724

 Score = 31.5 bits (68), Expect = 1.2
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = +3

Query: 108 WYARLSPKHGVSLPPYNHVVQVGDPTLRKVSEPVPIENIK 227
           WYARLSP H V    Y    +   PT+ ++ + +PI  IK
Sbjct: 576 WYARLSPNHKVI--HYGDCDEKTIPTMEELPKKLPISEIK 613


>AF417860-1|AAL38511.1|  724|Drosophila melanogaster PH domain
           protein CED-12 protein.
          Length = 724

 Score = 31.5 bits (68), Expect = 1.2
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = +3

Query: 108 WYARLSPKHGVSLPPYNHVVQVGDPTLRKVSEPVPIENIK 227
           WYARLSP H V    Y    +   PT+ ++ + +PI  IK
Sbjct: 576 WYARLSPNHKVI--HYGDCDEKTIPTMEELPKKLPISEIK 613


>AE014134-2158|AAF53164.1|  724|Drosophila melanogaster CG5336-PA
           protein.
          Length = 724

 Score = 31.5 bits (68), Expect = 1.2
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = +3

Query: 108 WYARLSPKHGVSLPPYNHVVQVGDPTLRKVSEPVPIENIK 227
           WYARLSP H V    Y    +   PT+ ++ + +PI  IK
Sbjct: 576 WYARLSPNHKVI--HYGDCDEKTIPTMEELPKKLPISEIK 613


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,942,622
Number of Sequences: 53049
Number of extensions: 726994
Number of successful extensions: 1837
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1771
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1837
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3231892257
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)