Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt9k04
(610 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L14433-6|AAA27974.2| 2107|Caenorhabditis elegans Hypothetical pr... 36 0.023
U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical pr... 34 0.091
Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical pr... 31 0.64
Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical pr... 31 0.64
X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy ch... 31 0.64
M37235-1|AAA28122.1| 273|Caenorhabditis elegans myosin II protein. 31 0.64
AF014939-5|AAB63928.2| 302|Caenorhabditis elegans Hypothetical ... 31 0.64
Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical pr... 29 2.0
X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy ch... 29 2.0
Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical p... 29 2.6
Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical pr... 29 2.6
J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy ch... 29 2.6
AF077542-4|AAU20829.1| 315|Caenorhabditis elegans Serpentine re... 29 2.6
U53154-10|AAC25849.1| 142|Caenorhabditis elegans Hypothetical p... 29 3.4
U40029-8|AAA81128.2| 275|Caenorhabditis elegans Hypothetical pr... 29 3.4
U97191-7|AAB52429.1| 241|Caenorhabditis elegans Hypothetical pr... 28 4.5
U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical p... 28 4.5
U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical p... 28 4.5
U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical p... 28 4.5
U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical p... 28 4.5
Z80216-11|CAN99667.1| 984|Caenorhabditis elegans Hypothetical p... 28 6.0
Z80216-10|CAB02286.4| 949|Caenorhabditis elegans Hypothetical p... 28 6.0
Z73427-4|CAA97802.3| 601|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z47075-6|CAA87379.1| 538|Caenorhabditis elegans Hypothetical pr... 28 6.0
U13070-7|AAC46638.1| 414|Caenorhabditis elegans Rabaptin (rab e... 28 6.0
AL034488-12|CAD31697.1| 450|Caenorhabditis elegans Hypothetical... 28 6.0
AL023823-2|CAN99714.1| 984|Caenorhabditis elegans Hypothetical ... 28 6.0
AL023823-1|CAA19441.4| 949|Caenorhabditis elegans Hypothetical ... 28 6.0
AF500111-1|AAM27196.1| 538|Caenorhabditis elegans poly ADP-ribo... 28 6.0
AF067618-6|AAC19197.2| 1015|Caenorhabditis elegans Hypothetical ... 28 6.0
AF016679-3|AAB66160.1| 578|Caenorhabditis elegans Hypothetical ... 28 6.0
AF016679-2|AAB66159.1| 658|Caenorhabditis elegans Hypothetical ... 28 6.0
U41545-6|AAK39135.1| 1130|Caenorhabditis elegans Temporarily ass... 27 7.9
CU457737-8|CAM36329.1| 811|Caenorhabditis elegans Hypothetical ... 27 7.9
AF000197-3|AAB52898.2| 109|Caenorhabditis elegans Hypothetical ... 27 7.9
>L14433-6|AAA27974.2| 2107|Caenorhabditis elegans Hypothetical
protein C50C3.2 protein.
Length = 2107
Score = 35.9 bits (79), Expect = 0.023
Identities = 16/62 (25%), Positives = 35/62 (56%)
Frame = +3
Query: 72 EPPEDDNNEDITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREE 251
E PED N EDI +E +++ S ++ +E D++ Q+ ++L Q ++ +++ +
Sbjct: 416 ESPEDMNAEDIEKEIRVIDGITVRCTSVVEQIENIEDELRQKPEQLNQLSVYASKQVNDL 475
Query: 252 NK 257
N+
Sbjct: 476 NE 477
>U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical protein
F58G4.1 protein.
Length = 1974
Score = 33.9 bits (74), Expect = 0.091
Identities = 19/57 (33%), Positives = 31/57 (54%)
Frame = +3
Query: 81 EDDNNEDITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREE 251
E+D + + LESTLDEL L+ +R D +Q ++ ++ + I QE+ EE
Sbjct: 1023 EEDKVNHLNKTKAKLESTLDELEDTLEREKRGRQDCEKQRRK-VEGELKIAQELIEE 1078
>Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical protein
T18D3.4 protein.
Length = 1947
Score = 31.1 bits (67), Expect = 0.64
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +3
Query: 123 LESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENK 257
LE+ ++EL ALD + N+D + ++ L ++Q + EE K
Sbjct: 1634 LEADINELEIALDHANKANEDAQKNIRRYLDQIRELQQTVDEEQK 1678
>Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical protein
T18D3.4 protein.
Length = 1947
Score = 31.1 bits (67), Expect = 0.64
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +3
Query: 123 LESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENK 257
LE+ ++EL ALD + N+D + ++ L ++Q + EE K
Sbjct: 1634 LEADINELEIALDHANKANEDAQKNIRRYLDQIRELQQTVDEEQK 1678
>X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy chain 2
protein.
Length = 1947
Score = 31.1 bits (67), Expect = 0.64
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +3
Query: 123 LESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENK 257
LE+ ++EL ALD + N+D + ++ L ++Q + EE K
Sbjct: 1634 LEADINELEIALDHANKANEDAQKNIRRYLDQIRELQQTVDEEQK 1678
>M37235-1|AAA28122.1| 273|Caenorhabditis elegans myosin II protein.
Length = 273
Score = 31.1 bits (67), Expect = 0.64
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +3
Query: 123 LESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENK 257
LE+ ++EL ALD + N+D + ++ L ++Q + EE K
Sbjct: 134 LEADINELEIALDHANKANEDAQKNIRRYLDQIRELQQTVDEEQK 178
>AF014939-5|AAB63928.2| 302|Caenorhabditis elegans Hypothetical
protein ZC132.6 protein.
Length = 302
Score = 31.1 bits (67), Expect = 0.64
Identities = 18/51 (35%), Positives = 29/51 (56%)
Frame = +3
Query: 96 EDITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMRE 248
E + +Y EST++ LN L + KND I Q KEL ++ + I ++R+
Sbjct: 144 EALKNKYTNSESTINSLNEKLLKEKSKNDSIQAQ-KELYENLVIIIDQLRQ 193
>Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical protein
K12F2.1 protein.
Length = 1969
Score = 29.5 bits (63), Expect = 2.0
Identities = 11/41 (26%), Positives = 25/41 (60%)
Frame = +3
Query: 84 DDNNEDITEEYELLESTLDELNSALDFLERKNDDIHQQLKE 206
++ NE + + LES L ++ L+ ++ +N+D+ +Q K+
Sbjct: 915 EERNEKLNQLKATLESKLSDITGQLEDMQERNEDLARQKKK 955
Score = 28.3 bits (60), Expect = 4.5
Identities = 14/60 (23%), Positives = 31/60 (51%)
Frame = +3
Query: 81 EDDNNEDITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENKE 260
E E+ + LES +++L ALD R D + +K+ +++ ++ ++ EE ++
Sbjct: 1617 ETKQKEEALRIKKKLESDINDLEIALDHANRAYADAQKTIKKYMETVQELQFQIEEEQRQ 1676
>X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy chain 3
protein.
Length = 1969
Score = 29.5 bits (63), Expect = 2.0
Identities = 11/41 (26%), Positives = 25/41 (60%)
Frame = +3
Query: 84 DDNNEDITEEYELLESTLDELNSALDFLERKNDDIHQQLKE 206
++ NE + + LES L ++ L+ ++ +N+D+ +Q K+
Sbjct: 915 EERNEKLNQLKATLESKLSDITGQLEDMQERNEDLARQKKK 955
Score = 28.3 bits (60), Expect = 4.5
Identities = 14/60 (23%), Positives = 31/60 (51%)
Frame = +3
Query: 81 EDDNNEDITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENKE 260
E E+ + LES +++L ALD R D + +K+ +++ ++ ++ EE ++
Sbjct: 1617 ETKQKEEALRIKKKLESDINDLEIALDHANRAYADAQKTIKKYMETVQELQFQIEEEQRQ 1676
>Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical
protein F11C3.3 protein.
Length = 1963
Score = 29.1 bits (62), Expect = 2.6
Identities = 17/58 (29%), Positives = 30/58 (51%)
Frame = +3
Query: 81 EDDNNEDITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREEN 254
E+D + LE TLD+L +L+ +R D+ +Q K ++ + I QE +E+
Sbjct: 1022 EEDKGNHQNKVKAKLEQTLDDLEDSLEREKRARADLDKQ-KRKVEGELKIAQENIDES 1078
>Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical protein
F11C3.3 protein.
Length = 1963
Score = 29.1 bits (62), Expect = 2.6
Identities = 17/58 (29%), Positives = 30/58 (51%)
Frame = +3
Query: 81 EDDNNEDITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREEN 254
E+D + LE TLD+L +L+ +R D+ +Q K ++ + I QE +E+
Sbjct: 1022 EEDKGNHQNKVKAKLEQTLDDLEDSLEREKRARADLDKQ-KRKVEGELKIAQENIDES 1078
>J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy chain
protein.
Length = 1966
Score = 29.1 bits (62), Expect = 2.6
Identities = 17/58 (29%), Positives = 30/58 (51%)
Frame = +3
Query: 81 EDDNNEDITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREEN 254
E+D + LE TLD+L +L+ +R D+ +Q K ++ + I QE +E+
Sbjct: 1025 EEDKGNHQNKVKAKLEQTLDDLEDSLEREKRARADLDKQ-KRKVEGELKIAQENIDES 1081
>AF077542-4|AAU20829.1| 315|Caenorhabditis elegans Serpentine
receptor, class z protein63 protein.
Length = 315
Score = 29.1 bits (62), Expect = 2.6
Identities = 11/41 (26%), Positives = 22/41 (53%)
Frame = -3
Query: 290 ICISSITVVDFLIFFTHFLSNCNIGLQKLFQLLVNIIIFTL 168
+ I +T+V FL++F C++ +Q F + ++ TL
Sbjct: 110 VLIMMMTLVKFLVYFFPSTEKCSLSVQSFFHKNLKLVYLTL 150
>U53154-10|AAC25849.1| 142|Caenorhabditis elegans Hypothetical
protein C33G8.3 protein.
Length = 142
Score = 28.7 bits (61), Expect = 3.4
Identities = 21/67 (31%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Frame = +3
Query: 78 PEDDNNEDITEEYELLEST-LDELNSALDF-LERKNDDIHQQLKELLQSNIAIRQEMRE- 248
P +++N D+ + +E LD + A D LE+K D+I +++ E ++ I +E RE
Sbjct: 19 PLNEDNVDLESDVAEMEGAELDRVKRASDHKLEKKLDEIMEKV-EKIKDKIEENKEKREK 77
Query: 249 ENKEVNN 269
+NK+ N
Sbjct: 78 KNKKKGN 84
>U40029-8|AAA81128.2| 275|Caenorhabditis elegans Hypothetical
protein F10G7.3 protein.
Length = 275
Score = 28.7 bits (61), Expect = 3.4
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +3
Query: 72 EPPEDDNNEDITEEYELLESTLDELNSALDFLERKNDD 185
E +DD E EE +L ES + L +ALD E+K D
Sbjct: 191 EEEDDDEMEANAEEVDLNESFNERLANALDGAEQKGAD 228
>U97191-7|AAB52429.1| 241|Caenorhabditis elegans Hypothetical
protein F53F10.1 protein.
Length = 241
Score = 28.3 bits (60), Expect = 4.5
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +3
Query: 69 IEPPEDDNNEDITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQS 218
+E + D NE++ E E L+ +ELN + +E I Q L+ +QS
Sbjct: 176 VETTKSDINEELKAENEFLKDQANELNKCREKIETDGKTI-QDLRLRIQS 224
>U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical
protein F35D11.11a protein.
Length = 1840
Score = 28.3 bits (60), Expect = 4.5
Identities = 15/56 (26%), Positives = 30/56 (53%)
Frame = +3
Query: 108 EEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENKEVNNSN 275
E+YE L+ L+E+N ER+ D+ L +L + + E++++ V++ N
Sbjct: 704 EKYEQLKMELEEMNRRGQEKEREEADLRALLDDLRGNFDKLTNELKQKGVTVDSLN 759
>U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical
protein F35D11.11c protein.
Length = 1898
Score = 28.3 bits (60), Expect = 4.5
Identities = 15/56 (26%), Positives = 30/56 (53%)
Frame = +3
Query: 108 EEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENKEVNNSN 275
E+YE L+ L+E+N ER+ D+ L +L + + E++++ V++ N
Sbjct: 704 EKYEQLKMELEEMNRRGQEKEREEADLRALLDDLRGNFDKLTNELKQKGVTVDSLN 759
>U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical
protein F35D11.11d protein.
Length = 1671
Score = 28.3 bits (60), Expect = 4.5
Identities = 15/56 (26%), Positives = 30/56 (53%)
Frame = +3
Query: 108 EEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENKEVNNSN 275
E+YE L+ L+E+N ER+ D+ L +L + + E++++ V++ N
Sbjct: 464 EKYEQLKMELEEMNRRGQEKEREEADLRALLDDLRGNFDKLTNELKQKGVTVDSLN 519
>U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical
protein F35D11.11b protein.
Length = 1911
Score = 28.3 bits (60), Expect = 4.5
Identities = 15/56 (26%), Positives = 30/56 (53%)
Frame = +3
Query: 108 EEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENKEVNNSN 275
E+YE L+ L+E+N ER+ D+ L +L + + E++++ V++ N
Sbjct: 704 EKYEQLKMELEEMNRRGQEKEREEADLRALLDDLRGNFDKLTNELKQKGVTVDSLN 759
>Z80216-11|CAN99667.1| 984|Caenorhabditis elegans Hypothetical
protein F10G8.8b protein.
Length = 984
Score = 27.9 bits (59), Expect = 6.0
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 5/53 (9%)
Frame = +3
Query: 123 LESTLDELNSALDFLE-----RKNDDIHQQLKELLQSNIAIRQEMREENKEVN 266
LE +D L + LD + RK D I+Q++KEL + + E+ KEV+
Sbjct: 541 LEQQVDNLRTQLDAAKDDSARRKRDAINQEIKELRITLKSSEDELHRYRKEVD 593
>Z80216-10|CAB02286.4| 949|Caenorhabditis elegans Hypothetical
protein F10G8.8a protein.
Length = 949
Score = 27.9 bits (59), Expect = 6.0
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 5/53 (9%)
Frame = +3
Query: 123 LESTLDELNSALDFLE-----RKNDDIHQQLKELLQSNIAIRQEMREENKEVN 266
LE +D L + LD + RK D I+Q++KEL + + E+ KEV+
Sbjct: 541 LEQQVDNLRTQLDAAKDDSARRKRDAINQEIKELRITLKSSEDELHRYRKEVD 593
>Z73427-4|CAA97802.3| 601|Caenorhabditis elegans Hypothetical
protein F58B3.4 protein.
Length = 601
Score = 27.9 bits (59), Expect = 6.0
Identities = 18/66 (27%), Positives = 31/66 (46%)
Frame = +3
Query: 72 EPPEDDNNEDITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREE 251
E ED+ + + +E ++T DE + DF + K+DD L++ I E E+
Sbjct: 78 ELEEDEEVQPLKKEKISKKTTKDEDDELDDFFDEKDDD-EDALEDADDEEDEISDEENED 136
Query: 252 NKEVNN 269
+E N
Sbjct: 137 EEEEEN 142
>Z47075-6|CAA87379.1| 538|Caenorhabditis elegans Hypothetical
protein E02H1.4 protein.
Length = 538
Score = 27.9 bits (59), Expect = 6.0
Identities = 16/54 (29%), Positives = 31/54 (57%), Gaps = 4/54 (7%)
Frame = +3
Query: 75 PPEDDNNEDITEEYELLESTLDELNSALDFLERK----NDDIHQQLKELLQSNI 224
PP+ D++ I E ELL++ + ++L+ + K + DI+Q+L E L ++
Sbjct: 255 PPKIDSHAKIQAERELLDALKGSIEASLELKDLKKTASSKDIYQRLYERLPCHL 308
>U13070-7|AAC46638.1| 414|Caenorhabditis elegans Rabaptin (rab
effector) protein 5 protein.
Length = 414
Score = 27.9 bits (59), Expect = 6.0
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Frame = +3
Query: 123 LESTLDELNSALDFLERKNDD---IHQQLKELLQSNIAIRQEMREE 251
+E D+LN A D L++ +DD + ++ K+LL S QE+R E
Sbjct: 125 IEVFTDQLNLARDKLQQADDDFVTLGKKYKKLLGSTRKSAQELRSE 170
>AL034488-12|CAD31697.1| 450|Caenorhabditis elegans Hypothetical
protein Y54G11A.14 protein.
Length = 450
Score = 27.9 bits (59), Expect = 6.0
Identities = 15/57 (26%), Positives = 33/57 (57%)
Frame = +3
Query: 81 EDDNNEDITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREE 251
EDD+N+D ++ E E +E + A D E ++D+ ++++KE + + + ++ E
Sbjct: 49 EDDDNDDDEDDDEEEEDEDEEEDEAED--EAEDDEENEEVKEEKEDEEVVEERVKVE 103
>AL023823-2|CAN99714.1| 984|Caenorhabditis elegans Hypothetical
protein F10G8.8b protein.
Length = 984
Score = 27.9 bits (59), Expect = 6.0
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 5/53 (9%)
Frame = +3
Query: 123 LESTLDELNSALDFLE-----RKNDDIHQQLKELLQSNIAIRQEMREENKEVN 266
LE +D L + LD + RK D I+Q++KEL + + E+ KEV+
Sbjct: 541 LEQQVDNLRTQLDAAKDDSARRKRDAINQEIKELRITLKSSEDELHRYRKEVD 593
>AL023823-1|CAA19441.4| 949|Caenorhabditis elegans Hypothetical
protein F10G8.8a protein.
Length = 949
Score = 27.9 bits (59), Expect = 6.0
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 5/53 (9%)
Frame = +3
Query: 123 LESTLDELNSALDFLE-----RKNDDIHQQLKELLQSNIAIRQEMREENKEVN 266
LE +D L + LD + RK D I+Q++KEL + + E+ KEV+
Sbjct: 541 LEQQVDNLRTQLDAAKDDSARRKRDAINQEIKELRITLKSSEDELHRYRKEVD 593
>AF500111-1|AAM27196.1| 538|Caenorhabditis elegans poly ADP-ribose
metabolism enzyme-2 protein.
Length = 538
Score = 27.9 bits (59), Expect = 6.0
Identities = 16/54 (29%), Positives = 31/54 (57%), Gaps = 4/54 (7%)
Frame = +3
Query: 75 PPEDDNNEDITEEYELLESTLDELNSALDFLERK----NDDIHQQLKELLQSNI 224
PP+ D++ I E ELL++ + ++L+ + K + DI+Q+L E L ++
Sbjct: 255 PPKIDSHAKIQAERELLDALKGSIEASLELKDLKKTASSKDIYQRLYERLPCHL 308
>AF067618-6|AAC19197.2| 1015|Caenorhabditis elegans Hypothetical
protein F56H1.5 protein.
Length = 1015
Score = 27.9 bits (59), Expect = 6.0
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +3
Query: 510 CYKLHIYVNRNEQ*HLVEHCSQKK-NGSIKHNIT 608
CY ++Y+N NE+ VE +KK SI+ N+T
Sbjct: 680 CYFRNLYINENEEKKNVEEQKKKKYYYSIRFNVT 713
>AF016679-3|AAB66160.1| 578|Caenorhabditis elegans Hypothetical
protein T28C12.4b protein.
Length = 578
Score = 27.9 bits (59), Expect = 6.0
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +3
Query: 120 LLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENK 257
LL T E+NSA+D L RKN +++ + + +R ++K
Sbjct: 347 LLRGTEKEINSAIDVLSRKNRLSRSKIEAMTEKVYGDSPALRADSK 392
>AF016679-2|AAB66159.1| 658|Caenorhabditis elegans Hypothetical
protein T28C12.4a protein.
Length = 658
Score = 27.9 bits (59), Expect = 6.0
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +3
Query: 120 LLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENK 257
LL T E+NSA+D L RKN +++ + + +R ++K
Sbjct: 427 LLRGTEKEINSAIDVLSRKNRLSRSKIEAMTEKVYGDSPALRADSK 472
>U41545-6|AAK39135.1| 1130|Caenorhabditis elegans Temporarily assigned
gene nameprotein 278 protein.
Length = 1130
Score = 27.5 bits (58), Expect = 7.9
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Frame = +3
Query: 84 DDNNEDIT--EEYELLESTLDELNSALDFLERKNDDIHQQLKE---LLQSNIAIRQEMRE 248
+ +NE +T E LE+ L E L + K DD+ QQL E ++ + +I++++ E
Sbjct: 820 EKDNEVLTKAERINELETCLKEREVELTGMRTKLDDMTQQLNEETTVVLFDNSIQEKIDE 879
Query: 249 ENKEVNNSN*R 281
+ +N N R
Sbjct: 880 KEATINEMNER 890
>CU457737-8|CAM36329.1| 811|Caenorhabditis elegans Hypothetical
protein C52D10.12 protein.
Length = 811
Score = 27.5 bits (58), Expect = 7.9
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
Frame = +2
Query: 299 ILNLIVQIYMLPSVICLSQKCKIEIVNLNIT---IYQY 403
++ I ++MLP L+ K +EIV + T +YQY
Sbjct: 393 VMTKIEDVFMLPDTTVLNAKTVMEIVKMGYTRIPVYQY 430
>AF000197-3|AAB52898.2| 109|Caenorhabditis elegans Hypothetical
protein T21G5.2 protein.
Length = 109
Score = 27.5 bits (58), Expect = 7.9
Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = -2
Query: 324 YICTIKFKIVLYLHFFNYCC*L-PYFL 247
+I I+F I Y+H F+Y C L YFL
Sbjct: 30 FIFLIQFVIFTYIHIFSYLCVLFNYFL 56
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,411,958
Number of Sequences: 27780
Number of extensions: 222608
Number of successful extensions: 966
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 851
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 961
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1311096392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -