Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt9k02
(578 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY061165-1|AAL28713.1| 493|Drosophila melanogaster LD13176p pro... 36 0.052
AE014296-2650|AAF49528.3| 493|Drosophila melanogaster CG5151-PA... 36 0.052
AE014296-2649|AAS64987.1| 695|Drosophila melanogaster CG5151-PB... 36 0.052
U35854-1|AAC47019.1| 370|Drosophila melanogaster commissureless... 29 3.4
AE014296-2570|AAF49584.1| 370|Drosophila melanogaster CG17943-P... 29 3.4
AY052142-1|AAK93566.1| 1367|Drosophila melanogaster SD09926p pro... 29 4.5
AF097636-1|AAF63187.1| 1368|Drosophila melanogaster bicoid-inter... 29 4.5
AE013599-166|AAM68350.1| 1367|Drosophila melanogaster CG8276-PB,... 29 4.5
AE013599-165|AAF57267.2| 1367|Drosophila melanogaster CG8276-PA,... 29 4.5
AE014298-603|AAF45924.1| 1911|Drosophila melanogaster CG4857-PB ... 25 8.3
AY061372-1|AAL28920.1| 1283|Drosophila melanogaster LD29423p pro... 25 8.6
AL033125-4|CAA21827.1| 911|Drosophila melanogaster EG:EG0007.4 ... 25 8.8
>AY061165-1|AAL28713.1| 493|Drosophila melanogaster LD13176p
protein.
Length = 493
Score = 35.5 bits (78), Expect = 0.052
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = +1
Query: 433 MLSVQAPGCAGMERLGAP 486
MLSVQ GCAGMERLG P
Sbjct: 1 MLSVQTAGCAGMERLGVP 18
>AE014296-2650|AAF49528.3| 493|Drosophila melanogaster CG5151-PA,
isoform A protein.
Length = 493
Score = 35.5 bits (78), Expect = 0.052
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = +1
Query: 433 MLSVQAPGCAGMERLGAP 486
MLSVQ GCAGMERLG P
Sbjct: 1 MLSVQTAGCAGMERLGVP 18
>AE014296-2649|AAS64987.1| 695|Drosophila melanogaster CG5151-PB,
isoform B protein.
Length = 695
Score = 35.5 bits (78), Expect = 0.052
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = +1
Query: 433 MLSVQAPGCAGMERLGAP 486
MLSVQ GCAGMERLG P
Sbjct: 203 MLSVQTAGCAGMERLGVP 220
>U35854-1|AAC47019.1| 370|Drosophila melanogaster commissureless
protein.
Length = 370
Score = 29.5 bits (63), Expect = 3.4
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +1
Query: 493 PRLRHDHRHHHSTLEWEKQQKL 558
P L H HHH WEKQ+ L
Sbjct: 252 PSLAAVHHHHHCISNWEKQEPL 273
>AE014296-2570|AAF49584.1| 370|Drosophila melanogaster CG17943-PA
protein.
Length = 370
Score = 29.5 bits (63), Expect = 3.4
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +1
Query: 493 PRLRHDHRHHHSTLEWEKQQKL 558
P L H HHH WEKQ+ L
Sbjct: 252 PSLAAVHHHHHCISNWEKQEPL 273
>AY052142-1|AAK93566.1| 1367|Drosophila melanogaster SD09926p
protein.
Length = 1367
Score = 29.1 bits (62), Expect = 4.5
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +1
Query: 499 LRHDHRHHHSTLEWEKQQKLXAMV 570
+ H H HHH + ++QQKL +++
Sbjct: 918 IHHHHHHHHDLEQLQQQQKLNSLL 941
>AF097636-1|AAF63187.1| 1368|Drosophila melanogaster
bicoid-interacting protein BIN3 protein.
Length = 1368
Score = 29.1 bits (62), Expect = 4.5
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +1
Query: 499 LRHDHRHHHSTLEWEKQQKLXAMV 570
+ H H HHH + ++QQKL +++
Sbjct: 919 IHHHHHHHHDLEQLQQQQKLNSLL 942
>AE013599-166|AAM68350.1| 1367|Drosophila melanogaster CG8276-PB,
isoform B protein.
Length = 1367
Score = 29.1 bits (62), Expect = 4.5
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +1
Query: 499 LRHDHRHHHSTLEWEKQQKLXAMV 570
+ H H HHH + ++QQKL +++
Sbjct: 918 IHHHHHHHHDLEQLQQQQKLNSLL 941
>AE013599-165|AAF57267.2| 1367|Drosophila melanogaster CG8276-PA,
isoform A protein.
Length = 1367
Score = 29.1 bits (62), Expect = 4.5
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +1
Query: 499 LRHDHRHHHSTLEWEKQQKLXAMV 570
+ H H HHH + ++QQKL +++
Sbjct: 918 IHHHHHHHHDLEQLQQQQKLNSLL 941
>AE014298-603|AAF45924.1| 1911|Drosophila melanogaster CG4857-PB
protein.
Length = 1911
Score = 25.0 bits (52), Expect(2) = 8.3
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = +1
Query: 469 ERLGAPGGPRLRHDHRHHH 525
E AP G H H HHH
Sbjct: 1064 EHYQAPQGQHHHHHHHHHH 1082
Score = 21.4 bits (43), Expect(2) = 8.3
Identities = 6/8 (75%), Positives = 6/8 (75%)
Frame = +1
Query: 505 HDHRHHHS 528
H H HHHS
Sbjct: 1081 HHHHHHHS 1088
>AY061372-1|AAL28920.1| 1283|Drosophila melanogaster LD29423p
protein.
Length = 1283
Score = 25.0 bits (52), Expect(2) = 8.6
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = +1
Query: 469 ERLGAPGGPRLRHDHRHHH 525
E AP G H H HHH
Sbjct: 436 EHYQAPQGQHHHHHHHHHH 454
Score = 21.4 bits (43), Expect(2) = 8.6
Identities = 6/8 (75%), Positives = 6/8 (75%)
Frame = +1
Query: 505 HDHRHHHS 528
H H HHHS
Sbjct: 453 HHHHHHHS 460
>AL033125-4|CAA21827.1| 911|Drosophila melanogaster EG:EG0007.4
protein.
Length = 911
Score = 25.0 bits (52), Expect(2) = 8.8
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = +1
Query: 469 ERLGAPGGPRLRHDHRHHH 525
E AP G H H HHH
Sbjct: 64 EHYQAPQGQHHHHHHHHHH 82
Score = 21.4 bits (43), Expect(2) = 8.8
Identities = 6/8 (75%), Positives = 6/8 (75%)
Frame = +1
Query: 505 HDHRHHHS 528
H H HHHS
Sbjct: 81 HHHHHHHS 88
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,866,748
Number of Sequences: 53049
Number of extensions: 387531
Number of successful extensions: 2393
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1445
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2303
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2296745289
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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