Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt9j22
(570 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_1568 + 27922338-27922342,27922839-27923058,27923369-279235... 155 2e-38
08_02_1573 + 27956351-27956409,27956411-27956630,27957000-279571... 154 4e-38
02_02_0678 + 12868735-12868739,12869576-12869795,12870280-128704... 150 7e-37
01_06_1419 + 37225007-37225011,37225633-37225852,37226347-372265... 146 1e-35
05_07_0079 - 27539389-27539892,27540059-27540343,27540453-275405... 59 3e-09
04_04_0401 - 24946801-24947562 44 1e-04
02_05_1241 - 35189111-35189389,35189604-35189711,35189982-351907... 30 1.5
06_03_0392 + 20318728-20319309,20319596-20319725,20319844-203198... 29 2.0
09_02_0251 - 6282420-6282526,6282642-6283104,6283223-6283289,628... 29 2.6
09_06_0364 + 22554082-22554225,22554306-22554520,22554671-225547... 29 3.4
03_02_0829 - 11599665-11600364,11600853-11601076,11601786-116020... 29 3.4
01_06_0529 - 30026101-30026277,30026363-30026438,30026509-300265... 29 3.4
06_03_0049 + 15961706-15962017,15962952-15963851,15964769-159649... 28 4.6
06_03_0225 - 18413668-18413751,18414641-18415493,18417497-18417516 28 6.0
03_06_0434 + 33894664-33895173 27 8.0
>08_02_1568 +
27922338-27922342,27922839-27923058,27923369-27923519,
27923874-27924079,27924211-27924264
Length = 211
Score = 155 bits (376), Expect = 2e-38
Identities = 72/117 (61%), Positives = 95/117 (81%)
Frame = +3
Query: 180 KILAKKFDAFLASESLIKQIPRLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMK 359
K LAKK+ AFLASE++IKQIPRLLGPG KFP L++HQES+ K++E K T+KFQ+K
Sbjct: 100 KKLAKKYHAFLASEAIIKQIPRLLGPG-----KFPTLVTHQESLESKVNETKATVKFQLK 154
Query: 360 KVLCLSVAVGHVDMTPDELAQNVHLSINFLVSLLKKHWQNVRSLHMKSTMGPPQRLY 530
KVLC+ VAVG++ M ++ QN+ +S+NFLVSLLKK+WQNVR L++KSTMG P R++
Sbjct: 155 KVLCMGVAVGNLSMEEKQIQQNIQMSVNFLVSLLKKNWQNVRCLYIKSTMGKPYRVF 211
Score = 77.8 bits (183), Expect = 6e-15
Identities = 36/61 (59%), Positives = 45/61 (73%)
Frame = +1
Query: 22 SKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYWPKNL 201
SK+ + L E ++ V+ K+K R F ETVELQIGLKNYDPQKDKRFSG+VKL + P+
Sbjct: 2 SKLQTEALKEAISQVVADCKEKNRKFTETVELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 61
Query: 202 M 204
M
Sbjct: 62 M 62
>08_02_1573 +
27956351-27956409,27956411-27956630,27957000-27957150,
27957602-27957807,27957967-27958020
Length = 229
Score = 154 bits (374), Expect = 4e-38
Identities = 72/117 (61%), Positives = 95/117 (81%)
Frame = +3
Query: 180 KILAKKFDAFLASESLIKQIPRLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMK 359
K LAKK+ AFLASE++IKQIPRLLGPG KFP L++HQES+ K++E K T+KFQ+K
Sbjct: 118 KKLAKKYHAFLASEAIIKQIPRLLGPG-----KFPTLVTHQESLESKVNETKATVKFQLK 172
Query: 360 KVLCLSVAVGHVDMTPDELAQNVHLSINFLVSLLKKHWQNVRSLHMKSTMGPPQRLY 530
KVLC+ VAVG++ M ++ QN+ +S+NFLVSLLKK+WQNVR L++KSTMG P R++
Sbjct: 173 KVLCMGVAVGNLSMEEKQIQQNIQMSVNFLVSLLKKNWQNVRCLYIKSTMGKPIRVF 229
Score = 77.0 bits (181), Expect = 1e-14
Identities = 36/60 (60%), Positives = 45/60 (75%)
Frame = +1
Query: 25 KVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYWPKNLM 204
K+ + L E ++ V+ SK+K R F ETVELQIGLKNYDPQKDKRFSG+VKL + P+ M
Sbjct: 21 KLQSEVLKEAISQVVGESKEKGRKFTETVELQIGLKNYDPQKDKRFSGSVKLPHIPRPKM 80
>02_02_0678 +
12868735-12868739,12869576-12869795,12870280-12870430,
12870853-12871058,12871166-12871219
Length = 211
Score = 150 bits (364), Expect = 7e-37
Identities = 72/117 (61%), Positives = 93/117 (79%)
Frame = +3
Query: 180 KILAKKFDAFLASESLIKQIPRLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMK 359
K LAKK+ AFLASE++IKQIPRLLGPG KFP L++HQES+ K++E K T+KFQ+K
Sbjct: 100 KKLAKKYHAFLASEAIIKQIPRLLGPG-----KFPTLVTHQESLESKVNETKATVKFQLK 154
Query: 360 KVLCLSVAVGHVDMTPDELAQNVHLSINFLVSLLKKHWQNVRSLHMKSTMGPPQRLY 530
KVLC+ VAVG+ M ++ QNV +S+NFLVSLLKK+WQNVR L++KSTMG R++
Sbjct: 155 KVLCMGVAVGNCAMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKVYRVF 211
Score = 79.8 bits (188), Expect = 1e-15
Identities = 34/58 (58%), Positives = 46/58 (79%)
Frame = +1
Query: 22 SKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYWPK 195
SK+ D L E ++ + S++K+R F+ET+ELQIGLKNYDPQKDKRFSG+VKL + P+
Sbjct: 2 SKLQSDALREAISQIANDSREKQRKFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPR 59
>01_06_1419 +
37225007-37225011,37225633-37225852,37226347-37226516,
37226615-37226676,37227002-37227207,37227581-37227634
Length = 238
Score = 146 bits (353), Expect = 1e-35
Identities = 77/139 (55%), Positives = 98/139 (70%), Gaps = 22/139 (15%)
Frame = +3
Query: 180 KILAKKFDAFLASESLIKQIPRLLGPGLNKAGK----------------------FPGLL 293
K LAKK+ AFLASE++IKQIPRLLGPGLNKAGK FP L+
Sbjct: 100 KKLAKKYHAFLASEAIIKQIPRLLGPGLNKAGKILLVYGRSILKSSYIIVSKRGKFPTLV 159
Query: 294 SHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDELAQNVHLSINFLVSLLKKHW 473
+HQES+ K++E K T+KFQ+KKVLC+ VAVG+ M ++ QNV +S+NFLVSLLKK+W
Sbjct: 160 THQESLESKVNETKATVKFQLKKVLCMGVAVGNCAMEEKQIFQNVQMSVNFLVSLLKKNW 219
Query: 474 QNVRSLHMKSTMGPPQRLY 530
QNVR L++KSTMG R++
Sbjct: 220 QNVRCLYLKSTMGKVIRVF 238
Score = 80.2 bits (189), Expect = 1e-15
Identities = 35/61 (57%), Positives = 47/61 (77%)
Frame = +1
Query: 22 SKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYWPKNL 201
SK+ D L E ++ + S++K+R F+ET+ELQIGLKNYDPQKDKRFSG+VKL + P+
Sbjct: 2 SKLQSDALREAISQITSESREKQRKFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 61
Query: 202 M 204
M
Sbjct: 62 M 62
>05_07_0079 -
27539389-27539892,27540059-27540343,27540453-27540550,
27540951-27541042,27541155-27541259,27541360-27541567,
27542469-27542472,27542742-27542765,27545025-27546266
Length = 853
Score = 58.8 bits (136), Expect = 3e-09
Identities = 29/107 (27%), Positives = 54/107 (50%), Gaps = 1/107 (0%)
Frame = +3
Query: 186 LAKKFDAFLASESLIKQIPRLLGPGLNKAGKFPGLLSHQES-MTQKIDEVKGTIKFQMKK 362
LA D F+A +++ +PR+LG K P + + +++ +V + ++
Sbjct: 133 LAASHDLFIADRAVLPLLPRVLGKAFYSTKKAPVAVDFARTGWLEQVRKVMNSTFLYLRT 192
Query: 363 VLCLSVAVGHVDMTPDELAQNVHLSINFLVSLLKKHWQNVRSLHMKS 503
C + VG +DM ++ +NV ++ V + K W NVRSLH+K+
Sbjct: 193 GTCSGIKVGRLDMKEEDTVENVMAAVEAAVENVPKKWANVRSLHLKA 239
>04_04_0401 - 24946801-24947562
Length = 253
Score = 43.6 bits (98), Expect = 1e-04
Identities = 22/93 (23%), Positives = 44/93 (47%)
Frame = +3
Query: 252 GPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDELAQNVH 431
G KA + + ++ + E ++ +++ C +V VGH M +E +NV
Sbjct: 113 GKAAAKAARVVPVDLADQAWAESAREAARRVELRVEGGTCRAVRVGHAAMAREEAVENVV 172
Query: 432 LSINFLVSLLKKHWQNVRSLHMKSTMGPPQRLY 530
++ + + + W+NVR+LH+K+ LY
Sbjct: 173 AAVEAAAACVPRKWRNVRALHVKAPESVALPLY 205
>02_05_1241 -
35189111-35189389,35189604-35189711,35189982-35190713,
35190811-35191230,35191484-35191565,35191719-35192002,
35193104-35193256
Length = 685
Score = 29.9 bits (64), Expect = 1.5
Identities = 10/19 (52%), Positives = 16/19 (84%)
Frame = +3
Query: 414 LAQNVHLSINFLVSLLKKH 470
+ + VHLS+NF++ L+KKH
Sbjct: 302 IVEGVHLSLNFVMGLMKKH 320
>06_03_0392 +
20318728-20319309,20319596-20319725,20319844-20319895,
20319995-20320061,20320547-20320633,20322526-20322567,
20322635-20322740,20323155-20323219,20323299-20323343,
20323442-20323549,20323636-20323723,20324147-20324193,
20324355-20324363
Length = 475
Score = 29.5 bits (63), Expect = 2.0
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +1
Query: 73 SSKDKKRNFLETVELQIGLKNYDPQK-DKRFSGTVKLKY 186
S+ +KKRNF ETVE + L DP++ D+ G + L +
Sbjct: 279 SANEKKRNFTETVEAHVML-GVDPRRGDQMVRGALTLPH 316
>09_02_0251 -
6282420-6282526,6282642-6283104,6283223-6283289,
6283536-6283808,6284096-6284907,6285402-6285479,
6285586-6285636,6285737-6285817,6285903-6285982,
6288481-6288652
Length = 727
Score = 29.1 bits (62), Expect = 2.6
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Frame = -1
Query: 420 EQAHQESCPHGQLLQKDTA---PSSFGT*WFP*LHQSSASWTPGGREDQGIYQLCSNR 256
E+ + ++ + QL+ K A P F WFP +H ++ S R Q I+ +C N+
Sbjct: 471 EKYNLQNVKYLQLMFKARATYIPVYFKNDWFPFIHSTTLSEGTNARRRQDIFGVCCNK 528
>09_06_0364 +
22554082-22554225,22554306-22554520,22554671-22554752,
22554976-22555371,22555553-22556293,22556420-22556551,
22556981-22557367
Length = 698
Score = 28.7 bits (61), Expect = 3.4
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +3
Query: 396 DMTPDELAQNVHLSINFLVSLLKKH 470
D + + VHLS+NF++ L++KH
Sbjct: 262 DRKESVVVEGVHLSLNFVMGLMRKH 286
>03_02_0829 -
11599665-11600364,11600853-11601076,11601786-11602000,
11602300-11602377,11602593-11603907
Length = 843
Score = 28.7 bits (61), Expect = 3.4
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -3
Query: 172 QCRRNACPSVGHSSSDQFEALQSPKS 95
Q RN PS+ H +SD F + SP S
Sbjct: 81 QKSRNLSPSISHQASDSFSPVPSPLS 106
>01_06_0529 -
30026101-30026277,30026363-30026438,30026509-30026570,
30026882-30027031,30027213-30027338,30028096-30028305,
30028870-30028938,30029024-30029080,30029131-30029277,
30029358-30029542,30029623-30029698,30029796-30029918,
30030395-30030410,30031743-30032745,30033521-30033789,
30034297-30034415
Length = 954
Score = 28.7 bits (61), Expect = 3.4
Identities = 13/56 (23%), Positives = 30/56 (53%)
Frame = +3
Query: 180 KILAKKFDAFLASESLIKQIPRLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIK 347
K++ ++D ++ ++ + +LG N K+ LL + + KIDE++ ++K
Sbjct: 276 KVVPLQYDVWMEK---VENLQHMLGCLKNHVEKYAALLDQHDDLHDKIDELEASLK 328
>06_03_0049 +
15961706-15962017,15962952-15963851,15964769-15964913,
15964969-15965705
Length = 697
Score = 28.3 bits (60), Expect = 4.6
Identities = 15/62 (24%), Positives = 28/62 (45%)
Frame = -3
Query: 526 NLWGGPIVDFICNDRTFCQCFLSSDTRKLMERCTF*ASSSGVMSTWPTATERHSTFFIWN 347
++W P + +C+D +C + + K++ERC + G S + T + F W
Sbjct: 37 HIWDEPYLYRVCSDGLLRRCVPTEEGLKIIERCHA-SPYGGHYSAFRTQAKIWQCGFFWP 95
Query: 346 LM 341
M
Sbjct: 96 TM 97
>06_03_0225 - 18413668-18413751,18414641-18415493,18417497-18417516
Length = 318
Score = 27.9 bits (59), Expect = 6.0
Identities = 17/70 (24%), Positives = 28/70 (40%)
Frame = -3
Query: 526 NLWGGPIVDFICNDRTFCQCFLSSDTRKLMERCTF*ASSSGVMSTWPTATERHSTFFIWN 347
+LW P + +C+D +C K++E+C A G + T + + F W
Sbjct: 125 HLWYAPYLYRVCSDGLLRRCVPVDKGMKIIEKCHA-APYGGHYGAFRTHAKIWQSGFFWP 183
Query: 346 LMVPLTSSIF 317
M T F
Sbjct: 184 TMYDDTKEFF 193
>03_06_0434 + 33894664-33895173
Length = 169
Score = 27.5 bits (58), Expect = 8.0
Identities = 11/31 (35%), Positives = 13/31 (41%)
Frame = -1
Query: 453 TQGS*WKDAHSEQAHQESCPHGQLLQKDTAP 361
T G W + H+ CPHG L AP
Sbjct: 110 TMGLRWPTPQRREQHKRLCPHGYRLPGPAAP 140
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,055,829
Number of Sequences: 37544
Number of extensions: 346050
Number of successful extensions: 945
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 911
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 941
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1317005676
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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