Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt9j19
         (632 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT015980-1|AAV36865.1|  178|Drosophila melanogaster RE68712p pro...   262   4e-70
AE014296-1657|AAF50270.3|  178|Drosophila melanogaster CG3911-PA...   262   4e-70
AF145611-1|AAD38586.1|  390|Drosophila melanogaster BcDNA.GH0292...    29   5.2  
AE014297-46|AAF52151.3|  390|Drosophila melanogaster CG1102-PA p...    29   5.2  
BT024192-1|ABC86254.1|  786|Drosophila melanogaster RE74757p pro...    29   6.9  
AL133504-2|CAB65844.1|  819|Drosophila melanogaster EG:BACH7M4.2...    29   6.9  
AE014298-395|AAF45778.1| 1529|Drosophila melanogaster CG14045-PA...    29   6.9  
AY051923-1|AAK93347.1|  806|Drosophila melanogaster LD40758p pro...    28   9.1  
AY051525-1|AAK92949.1|  434|Drosophila melanogaster GH18014p pro...    28   9.1  
AE014297-3274|AAF56099.3|  806|Drosophila melanogaster CG4656-PA...    28   9.1  
AE013599-1353|AAF58611.2| 5303|Drosophila melanogaster CG13185-P...    28   9.1  
AE013599-444|AAF59234.1|  381|Drosophila melanogaster CG1600-PB,...    28   9.1  
AE013599-443|AAF59235.1|  381|Drosophila melanogaster CG1600-PA,...    28   9.1  
AE013599-442|AAM71096.2|  434|Drosophila melanogaster CG1600-PC,...    28   9.1  

>BT015980-1|AAV36865.1|  178|Drosophila melanogaster RE68712p
           protein.
          Length = 178

 Score =  262 bits (641), Expect = 4e-70
 Identities = 122/167 (73%), Positives = 149/167 (89%), Gaps = 1/167 (0%)
 Frame = +1

Query: 133 MSRQTSRLDAKKVNSELLTLTYGALVSQMLKETENTEDVNKHLERIGYNMGVRLIEDFLA 312
           MSRQ SRLDAKKVNSE LTLTYGALV+QML++ EN EDVNK LERIGYNMG+RLIEDFLA
Sbjct: 1   MSRQASRLDAKKVNSEFLTLTYGALVTQMLRDFENAEDVNKQLERIGYNMGMRLIEDFLA 60

Query: 313 RTTSTRCLEMRETADKIQQAFKLYLSMQPTVTSWSSAGDEFSLVWDHCPLSEWVEMPSN- 489
           RT++ RCLEMRETAD+IQQAF++YL++QPT+++WS A DEFSLV+D  PL+E+VE+P + 
Sbjct: 61  RTSAPRCLEMRETADRIQQAFRIYLNIQPTISNWSPASDEFSLVFDSNPLTEFVELPPDL 120

Query: 490 NGLKYCALIPGAIRGALQMVQLDVQCWFVQDQLKGDPVTELRVKYLK 630
             L+Y A++ G IRGAL+MVQL+VQCWFVQDQLKGD VTELRVK+++
Sbjct: 121 TNLRYSAILSGCIRGALEMVQLEVQCWFVQDQLKGDNVTELRVKFVR 167


>AE014296-1657|AAF50270.3|  178|Drosophila melanogaster CG3911-PA
           protein.
          Length = 178

 Score =  262 bits (641), Expect = 4e-70
 Identities = 122/167 (73%), Positives = 149/167 (89%), Gaps = 1/167 (0%)
 Frame = +1

Query: 133 MSRQTSRLDAKKVNSELLTLTYGALVSQMLKETENTEDVNKHLERIGYNMGVRLIEDFLA 312
           MSRQ SRLDAKKVNSE LTLTYGALV+QML++ EN EDVNK LERIGYNMG+RLIEDFLA
Sbjct: 1   MSRQASRLDAKKVNSEFLTLTYGALVTQMLRDFENAEDVNKQLERIGYNMGMRLIEDFLA 60

Query: 313 RTTSTRCLEMRETADKIQQAFKLYLSMQPTVTSWSSAGDEFSLVWDHCPLSEWVEMPSN- 489
           RT++ RCLEMRETAD+IQQAF++YL++QPT+++WS A DEFSLV+D  PL+E+VE+P + 
Sbjct: 61  RTSAPRCLEMRETADRIQQAFRIYLNIQPTISNWSPASDEFSLVFDSNPLTEFVELPPDL 120

Query: 490 NGLKYCALIPGAIRGALQMVQLDVQCWFVQDQLKGDPVTELRVKYLK 630
             L+Y A++ G IRGAL+MVQL+VQCWFVQDQLKGD VTELRVK+++
Sbjct: 121 TNLRYSAILSGCIRGALEMVQLEVQCWFVQDQLKGDNVTELRVKFVR 167


>AF145611-1|AAD38586.1|  390|Drosophila melanogaster BcDNA.GH02921
           protein.
          Length = 390

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = +3

Query: 516 SRCNQRCSTDGTTRCTMLVCAGSVE 590
           S CNQR +T   T  T  +CAG VE
Sbjct: 303 SECNQRYATQRRTVTTKQMCAGGVE 327


>AE014297-46|AAF52151.3|  390|Drosophila melanogaster CG1102-PA
           protein.
          Length = 390

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = +3

Query: 516 SRCNQRCSTDGTTRCTMLVCAGSVE 590
           S CNQR +T   T  T  +CAG VE
Sbjct: 303 SECNQRYATQRRTVTTKQMCAGGVE 327


>BT024192-1|ABC86254.1|  786|Drosophila melanogaster RE74757p
           protein.
          Length = 786

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 16/53 (30%), Positives = 24/53 (45%)
 Frame = +1

Query: 364 QQAFKLYLSMQPTVTSWSSAGDEFSLVWDHCPLSEWVEMPSNNGLKYCALIPG 522
           QQ  +   +M   +T     G  FS+VW H P  E +E  +      C ++PG
Sbjct: 596 QQQGRTPFTMTKRLTRTEERGFGFSIVWTHPPRVEKIE--AGLSADRCGILPG 646


>AL133504-2|CAB65844.1|  819|Drosophila melanogaster EG:BACH7M4.2
           protein.
          Length = 819

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 16/53 (30%), Positives = 24/53 (45%)
 Frame = +1

Query: 364 QQAFKLYLSMQPTVTSWSSAGDEFSLVWDHCPLSEWVEMPSNNGLKYCALIPG 522
           QQ  +   +M   +T     G  FS+VW H P  E +E  +      C ++PG
Sbjct: 629 QQQGRTPFTMTKRLTRTEERGFGFSIVWTHPPRVEKIE--AGLSADRCGILPG 679


>AE014298-395|AAF45778.1| 1529|Drosophila melanogaster CG14045-PA
           protein.
          Length = 1529

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 16/53 (30%), Positives = 24/53 (45%)
 Frame = +1

Query: 364 QQAFKLYLSMQPTVTSWSSAGDEFSLVWDHCPLSEWVEMPSNNGLKYCALIPG 522
           QQ  +   +M   +T     G  FS+VW H P  E +E  +      C ++PG
Sbjct: 632 QQQGRTPFTMTKRLTRTEERGFGFSIVWTHPPRVEKIE--AGLSADRCGILPG 682


>AY051923-1|AAK93347.1|  806|Drosophila melanogaster LD40758p
           protein.
          Length = 806

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = +1

Query: 397 PTVTSWSSAGDEFSLVWDHCPLSEWVEMPSNNG 495
           P++TS ++AGDE +   D    SE V+ P  +G
Sbjct: 579 PSITSGAAAGDELTQTEDLYTASEGVDGPDGDG 611


>AY051525-1|AAK92949.1|  434|Drosophila melanogaster GH18014p
           protein.
          Length = 434

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 14/55 (25%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
 Frame = +1

Query: 400 TVTSWSSAGDEFSLVWDHCPLSEWVEMPSNNGLKYCALIPG-AIRGALQMVQLDV 561
           ++TS SS   E S   D+CP    +  P++ G++  +  PG  + G ++ +  ++
Sbjct: 108 SITSMSSVSSELS---DYCPSVNSMSSPAHQGIREGSFFPGFEVAGVIESLGSEI 159


>AE014297-3274|AAF56099.3|  806|Drosophila melanogaster CG4656-PA
           protein.
          Length = 806

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = +1

Query: 397 PTVTSWSSAGDEFSLVWDHCPLSEWVEMPSNNG 495
           P++TS ++AGDE +   D    SE V+ P  +G
Sbjct: 579 PSITSGAAAGDELTQTEDLYTASEGVDGPDGDG 611


>AE013599-1353|AAF58611.2| 5303|Drosophila melanogaster CG13185-PA
            protein.
          Length = 5303

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +1

Query: 172  NSELLTLTYGALVSQMLKETENTEDVNKHLERI 270
            NS+LLT  Y   V+ +L+  EN   + K LE +
Sbjct: 3001 NSQLLTSRYSGEVNNLLQAKENARQLLKELEYV 3033


>AE013599-444|AAF59234.1|  381|Drosophila melanogaster CG1600-PB,
           isoform B protein.
          Length = 381

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 14/55 (25%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
 Frame = +1

Query: 400 TVTSWSSAGDEFSLVWDHCPLSEWVEMPSNNGLKYCALIPG-AIRGALQMVQLDV 561
           ++TS SS   E S   D+CP    +  P++ G++  +  PG  + G ++ +  ++
Sbjct: 55  SITSMSSVSSELS---DYCPSVNSMSSPAHQGIREGSFFPGFEVAGVIESLGSEI 106


>AE013599-443|AAF59235.1|  381|Drosophila melanogaster CG1600-PA,
           isoform A protein.
          Length = 381

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 14/55 (25%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
 Frame = +1

Query: 400 TVTSWSSAGDEFSLVWDHCPLSEWVEMPSNNGLKYCALIPG-AIRGALQMVQLDV 561
           ++TS SS   E S   D+CP    +  P++ G++  +  PG  + G ++ +  ++
Sbjct: 55  SITSMSSVSSELS---DYCPSVNSMSSPAHQGIREGSFFPGFEVAGVIESLGSEI 106


>AE013599-442|AAM71096.2|  434|Drosophila melanogaster CG1600-PC,
           isoform C protein.
          Length = 434

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 14/55 (25%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
 Frame = +1

Query: 400 TVTSWSSAGDEFSLVWDHCPLSEWVEMPSNNGLKYCALIPG-AIRGALQMVQLDV 561
           ++TS SS   E S   D+CP    +  P++ G++  +  PG  + G ++ +  ++
Sbjct: 108 SITSMSSVSSELS---DYCPSVNSMSSPAHQGIREGSFFPGFEVAGVIESLGSEI 159


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,957,507
Number of Sequences: 53049
Number of extensions: 514872
Number of successful extensions: 1343
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1289
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1341
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2641708800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)