Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt9j19
(632 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z22176-4|CAA80133.1| 181|Caenorhabditis elegans Hypothetical pr... 121 5e-28
Z81476-3|CAB03922.3| 592|Caenorhabditis elegans Hypothetical pr... 29 2.1
U42841-14|AAC48172.3| 469|Caenorhabditis elegans Hypothetical p... 29 2.1
Z92808-1|CAB07266.2| 606|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z68006-7|CAA91995.2| 783|Caenorhabditis elegans Hypothetical pr... 29 2.8
U88310-1|AAB42340.1| 663|Caenorhabditis elegans Hypothetical pr... 29 2.8
AF497831-1|AAM18109.1| 783|Caenorhabditis elegans putative Na-H... 29 2.8
AF047658-4|AAC04417.1| 392|Caenorhabditis elegans Hypothetical ... 29 2.8
Z50016-2|CAC42346.1| 487|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z50016-1|CAA90318.1| 1106|Caenorhabditis elegans Hypothetical pr... 29 3.7
AF151640-1|AAD42382.1| 487|Caenorhabditis elegans ionotropic GA... 29 3.7
Z81571-3|CAB04613.1| 352|Caenorhabditis elegans Hypothetical pr... 28 4.8
AL021487-10|CAA16357.2| 1592|Caenorhabditis elegans Hypothetical... 28 4.8
Z74042-16|CAA98527.3| 512|Caenorhabditis elegans Hypothetical p... 28 6.4
Z74042-15|CAD54157.1| 505|Caenorhabditis elegans Hypothetical p... 28 6.4
Z81571-5|CAB04615.1| 419|Caenorhabditis elegans Hypothetical pr... 27 8.4
Z81102-2|CAB03203.1| 313|Caenorhabditis elegans Hypothetical pr... 27 8.4
Z79639-6|CAB01919.3| 957|Caenorhabditis elegans Hypothetical pr... 27 8.4
Z79639-5|CAD42645.2| 972|Caenorhabditis elegans Hypothetical pr... 27 8.4
Z79598-9|CAB01869.3| 957|Caenorhabditis elegans Hypothetical pr... 27 8.4
Z79598-8|CAD42646.2| 972|Caenorhabditis elegans Hypothetical pr... 27 8.4
Z50016-7|CAE52900.1| 90|Caenorhabditis elegans Hypothetical pr... 27 8.4
U41263-6|AAC24432.1| 338|Caenorhabditis elegans Serpentine rece... 27 8.4
AF519110-1|AAM74224.1| 957|Caenorhabditis elegans EOR-2B protein. 27 8.4
AF519109-1|AAM74223.1| 972|Caenorhabditis elegans EOR-2A protein. 27 8.4
AF502570-1|AAM74152.1| 972|Caenorhabditis elegans EOR-2 protein. 27 8.4
AF003141-10|AAK21487.1| 612|Caenorhabditis elegans Uncoordinate... 27 8.4
AF001272-1|AAB84235.1| 612|Caenorhabditis elegans enhancer of s... 27 8.4
AF001271-1|AAB84234.1| 612|Caenorhabditis elegans enhancer of s... 27 8.4
>Z22176-4|CAA80133.1| 181|Caenorhabditis elegans Hypothetical
protein ZK1098.5 protein.
Length = 181
Score = 121 bits (291), Expect = 5e-28
Identities = 61/140 (43%), Positives = 95/140 (67%), Gaps = 5/140 (3%)
Frame = +1
Query: 157 DAKKVNSELLTLTYGALVSQMLKETENTEDVNKHLERIGYNMGVRLIEDFLARTTST-RC 333
D+KK+++EL LTYGA+V++MLK+ E+ +DV L+++G+NMG RL +DFLA+ + RC
Sbjct: 11 DSKKMSAELFCLTYGAMVTEMLKDYEDPKDVTIQLDKMGFNMGTRLADDFLAKNANVPRC 70
Query: 334 LEMRETADKI-QQAFKLYLSMQPTVTSWSSAGDEFSLVWDHCPLSEWVEMPS---NNGLK 501
++ R+ AD + + A YL + T +SW+S EF++ + PL+E V++P+ + GL
Sbjct: 71 VDTRQIADVLCRNAIPCYLGISATASSWTSGDREFTITLEANPLTELVQVPAHLVSAGLS 130
Query: 502 YCALIPGAIRGALQMVQLDV 561
Y LI GAIRGAL+ V V
Sbjct: 131 YSQLIAGAIRGALEAVHFKV 150
>Z81476-3|CAB03922.3| 592|Caenorhabditis elegans Hypothetical
protein C25F9.4 protein.
Length = 592
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = +1
Query: 91 CKESYTNSSTHFYKMSRQTSRLDAKKVNSELLTLTYGALVS-QMLKET 231
C E+ N FYK+ + T D +++ YG L + Q LK T
Sbjct: 92 CSENSKNDDISFYKLKKTTKSQDFANCKEDIVLANYGLLETIQELKVT 139
>U42841-14|AAC48172.3| 469|Caenorhabditis elegans Hypothetical
protein T17H7.7 protein.
Length = 469
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1
Query: 205 LVSQMLKETENTEDVNKHLERIGYNMGVRLIE 300
L S + ENT D+NK L++I N + L+E
Sbjct: 428 LASDYRRRLENTGDINKILQKISENAYISLVE 459
>Z92808-1|CAB07266.2| 606|Caenorhabditis elegans Hypothetical
protein M04C3.2 protein.
Length = 606
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +1
Query: 91 CKESYTNSSTHFYKMSRQTSRLDAKKVNSELLTLTYGALVS-QMLKET 231
C E+ N + FYK+ R+T D V +++ YG L + Q LK T
Sbjct: 95 CSENSQNDALSFYKLKRKTKSQDF--VEEDIVLANYGLLETIQELKVT 140
>Z68006-7|CAA91995.2| 783|Caenorhabditis elegans Hypothetical
protein K09C8.1 protein.
Length = 783
Score = 29.1 bits (62), Expect = 2.8
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = -1
Query: 422 ALLQLVTVGCMLRYSLKACCILSAVSLISKQRVDVVRARKSSISLTPMLY 273
ALL L+ VG M +Y+L IL+ SL++ V A + + MLY
Sbjct: 216 ALLILIWVGIMGKYNLSVMDILTFASLVAAVDPVAVLAVFQEVGVNKMLY 265
>U88310-1|AAB42340.1| 663|Caenorhabditis elegans Hypothetical
protein C24G7.4 protein.
Length = 663
Score = 29.1 bits (62), Expect = 2.8
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = -2
Query: 523 HRESKRNISGRYYLASPPIH*VD-NGPKQAKTHL 425
H+ S++N + YY +SPPI ++ KQ+KT L
Sbjct: 623 HQTSRQNSTENYYSSSPPIFTIEPMSRKQSKTSL 656
>AF497831-1|AAM18109.1| 783|Caenorhabditis elegans putative Na-H
exchanger isoform 7 protein.
Length = 783
Score = 29.1 bits (62), Expect = 2.8
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = -1
Query: 422 ALLQLVTVGCMLRYSLKACCILSAVSLISKQRVDVVRARKSSISLTPMLY 273
ALL L+ VG M +Y+L IL+ SL++ V A + + MLY
Sbjct: 216 ALLILIWVGIMGKYNLSVMDILTFASLVAAVDPVAVLAVFQEVGVNKMLY 265
>AF047658-4|AAC04417.1| 392|Caenorhabditis elegans Hypothetical
protein K03H6.1 protein.
Length = 392
Score = 29.1 bits (62), Expect = 2.8
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -2
Query: 160 RPI*KFAETFCRNVLKNLYNFLYSFV 83
+ I KFA+TF +LK Y F++ +V
Sbjct: 15 KKIWKFAQTFFSQILKQFYRFIWQYV 40
>Z50016-2|CAC42346.1| 487|Caenorhabditis elegans Hypothetical
protein T21C12.1b protein.
Length = 487
Score = 28.7 bits (61), Expect = 3.7
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
Frame = -1
Query: 485 LGISTHSLSGQWSQTSENSSPALLQLVTVGCMLR--YSLKACCIL--SAVSLISKQRVDV 318
LG++T + +S P + + ++ L + + C +L +AV ISK R+ +
Sbjct: 282 LGVTTVLTMTTLMTMTNSSMPKVSYVKSIDIFLGVCFMMVFCSLLEYAAVGYISK-RMKL 340
Query: 317 VRARKSSISLTPM 279
VRARK S LTP+
Sbjct: 341 VRARKESRMLTPL 353
>Z50016-1|CAA90318.1| 1106|Caenorhabditis elegans Hypothetical
protein T21C12.1a protein.
Length = 1106
Score = 28.7 bits (61), Expect = 3.7
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
Frame = -1
Query: 485 LGISTHSLSGQWSQTSENSSPALLQLVTVGCMLR--YSLKACCIL--SAVSLISKQRVDV 318
LG++T + +S P + + ++ L + + C +L +AV ISK R+ +
Sbjct: 294 LGVTTVLTMTTLMTMTNSSMPKVSYVKSIDIFLGVCFMMVFCSLLEYAAVGYISK-RMKL 352
Query: 317 VRARKSSISLTPM 279
VRARK S LTP+
Sbjct: 353 VRARKESRMLTPL 365
>AF151640-1|AAD42382.1| 487|Caenorhabditis elegans ionotropic GABA
receptor subunitUNC-49A protein.
Length = 487
Score = 28.7 bits (61), Expect = 3.7
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
Frame = -1
Query: 485 LGISTHSLSGQWSQTSENSSPALLQLVTVGCMLR--YSLKACCIL--SAVSLISKQRVDV 318
LG++T + +S P + + ++ L + + C +L +AV ISK R+ +
Sbjct: 282 LGVTTVLTMTTLMTMTNSSMPKVSYVKSIDIFLGVCFMMVFCSLLEYAAVGYISK-RMKL 340
Query: 317 VRARKSSISLTPM 279
VRARK S LTP+
Sbjct: 341 VRARKESRMLTPL 353
>Z81571-3|CAB04613.1| 352|Caenorhabditis elegans Hypothetical
protein M01G12.4 protein.
Length = 352
Score = 28.3 bits (60), Expect = 4.8
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = +1
Query: 130 KMSRQTSRLDAKKVNSELLTLTYGALVSQMLKETENTEDVNKHLERIGYNMGVRLI 297
++S S + + + L + G LV +M K TEN + + I YN RL+
Sbjct: 212 QLSSTVSAIISNIIPCLLFPIFAGLLVKEMHKATENQRRLTSSKKTIDYNKTTRLV 267
>AL021487-10|CAA16357.2| 1592|Caenorhabditis elegans Hypothetical
protein Y45F10B.10 protein.
Length = 1592
Score = 28.3 bits (60), Expect = 4.8
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +1
Query: 487 NNGLKYCALIPGAIRGALQMVQLDV-QCWFVQDQLKGDPVTELR 615
+N KY A G G + + L+V QC F Q KGDP+T +R
Sbjct: 1173 SNDDKYAAC--GTNNGIVALWDLEVCQCVFTTIQNKGDPITCIR 1214
>Z74042-16|CAA98527.3| 512|Caenorhabditis elegans Hypothetical
protein T11F9.2b protein.
Length = 512
Score = 27.9 bits (59), Expect = 6.4
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +1
Query: 220 LKETENTEDVNKHLERIGYNMGVRLIEDFLARTTSTR 330
L + E TE K + + ++ + L + LART STR
Sbjct: 210 LSDVERTEQQEKEMAELANDLEMALTNNVLARTFSTR 246
>Z74042-15|CAD54157.1| 505|Caenorhabditis elegans Hypothetical
protein T11F9.2a protein.
Length = 505
Score = 27.9 bits (59), Expect = 6.4
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +1
Query: 220 LKETENTEDVNKHLERIGYNMGVRLIEDFLARTTSTR 330
L + E TE K + + ++ + L + LART STR
Sbjct: 203 LSDVERTEQQEKEMAELANDLEMALTNNVLARTFSTR 239
>Z81571-5|CAB04615.1| 419|Caenorhabditis elegans Hypothetical
protein M01G12.6 protein.
Length = 419
Score = 27.5 bits (58), Expect = 8.4
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +1
Query: 181 LLTLTYGALVSQMLKETENTEDVNKHLERIGYNMGVRLI 297
L + G LV +M K TEN + + I YN RL+
Sbjct: 296 LFPIFAGLLVKEMHKATENQRRLTSSKKTIDYNKTTRLV 334
>Z81102-2|CAB03203.1| 313|Caenorhabditis elegans Hypothetical
protein M02B1.4 protein.
Length = 313
Score = 27.5 bits (58), Expect = 8.4
Identities = 20/80 (25%), Positives = 43/80 (53%)
Frame = -1
Query: 503 YFRPLLLGISTHSLSGQWSQTSENSSPALLQLVTVGCMLRYSLKACCILSAVSLISKQRV 324
YF P+L+G++ H + ++ +N+ AL+ L +VG + SL + S +S+ + +
Sbjct: 184 YFMPVLVGLTAHLIGNRF----DNNRKALVGL-SVGSAVLVSLSMLLMTSGLSIGAFFSL 238
Query: 323 DVVRARKSSISLTPMLYPIL 264
V + ++L M+Y ++
Sbjct: 239 SVCSV-NAIVALQLMIYDLV 257
>Z79639-6|CAB01919.3| 957|Caenorhabditis elegans Hypothetical
protein C44H4.7b protein.
Length = 957
Score = 27.5 bits (58), Expect = 8.4
Identities = 21/69 (30%), Positives = 30/69 (43%)
Frame = -1
Query: 608 SVTGSPFN*SCTNQHCTSSCTICRAPLIAPGIKAQYFRPLLLGISTHSLSGQWSQTSENS 429
S+T S FN N+ TSS + G + +P++ S H+L+ Q S EN
Sbjct: 91 SLTMSQFNSMTGNEPSTSSNVFSASIPTTSGTQINASQPMIPTTSMHNLAVQSSMMLENK 150
Query: 428 SPALLQLVT 402
L L T
Sbjct: 151 LGQNLNLKT 159
>Z79639-5|CAD42645.2| 972|Caenorhabditis elegans Hypothetical
protein C44H4.7a protein.
Length = 972
Score = 27.5 bits (58), Expect = 8.4
Identities = 21/69 (30%), Positives = 30/69 (43%)
Frame = -1
Query: 608 SVTGSPFN*SCTNQHCTSSCTICRAPLIAPGIKAQYFRPLLLGISTHSLSGQWSQTSENS 429
S+T S FN N+ TSS + G + +P++ S H+L+ Q S EN
Sbjct: 91 SLTMSQFNSMTGNEPSTSSNVFSASIPTTSGTQINASQPMIPTTSMHNLAVQSSMMLENK 150
Query: 428 SPALLQLVT 402
L L T
Sbjct: 151 LGQNLNLKT 159
>Z79598-9|CAB01869.3| 957|Caenorhabditis elegans Hypothetical
protein C44H4.7b protein.
Length = 957
Score = 27.5 bits (58), Expect = 8.4
Identities = 21/69 (30%), Positives = 30/69 (43%)
Frame = -1
Query: 608 SVTGSPFN*SCTNQHCTSSCTICRAPLIAPGIKAQYFRPLLLGISTHSLSGQWSQTSENS 429
S+T S FN N+ TSS + G + +P++ S H+L+ Q S EN
Sbjct: 91 SLTMSQFNSMTGNEPSTSSNVFSASIPTTSGTQINASQPMIPTTSMHNLAVQSSMMLENK 150
Query: 428 SPALLQLVT 402
L L T
Sbjct: 151 LGQNLNLKT 159
>Z79598-8|CAD42646.2| 972|Caenorhabditis elegans Hypothetical
protein C44H4.7a protein.
Length = 972
Score = 27.5 bits (58), Expect = 8.4
Identities = 21/69 (30%), Positives = 30/69 (43%)
Frame = -1
Query: 608 SVTGSPFN*SCTNQHCTSSCTICRAPLIAPGIKAQYFRPLLLGISTHSLSGQWSQTSENS 429
S+T S FN N+ TSS + G + +P++ S H+L+ Q S EN
Sbjct: 91 SLTMSQFNSMTGNEPSTSSNVFSASIPTTSGTQINASQPMIPTTSMHNLAVQSSMMLENK 150
Query: 428 SPALLQLVT 402
L L T
Sbjct: 151 LGQNLNLKT 159
>Z50016-7|CAE52900.1| 90|Caenorhabditis elegans Hypothetical
protein T21C12.1g protein.
Length = 90
Score = 27.5 bits (58), Expect = 8.4
Identities = 17/32 (53%), Positives = 22/32 (68%), Gaps = 2/32 (6%)
Frame = -1
Query: 368 CCIL--SAVSLISKQRVDVVRARKSSISLTPM 279
C +L +AV ISK R+ +VRARK S LTP+
Sbjct: 10 CSLLEYAAVGYISK-RMKLVRARKESRMLTPL 40
>U41263-6|AAC24432.1| 338|Caenorhabditis elegans Serpentine
receptor, class a (alpha)protein 26 protein.
Length = 338
Score = 27.5 bits (58), Expect = 8.4
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +1
Query: 124 FYKMSRQTSRLDAKKVNSELLTLTYGALVSQMLKETEN 237
+YK SR +K+N LT TYG L S M + +EN
Sbjct: 302 YYKTKSTISR---RKINIAKLTSTYGDLDSHMKRLSEN 336
>AF519110-1|AAM74224.1| 957|Caenorhabditis elegans EOR-2B protein.
Length = 957
Score = 27.5 bits (58), Expect = 8.4
Identities = 21/69 (30%), Positives = 30/69 (43%)
Frame = -1
Query: 608 SVTGSPFN*SCTNQHCTSSCTICRAPLIAPGIKAQYFRPLLLGISTHSLSGQWSQTSENS 429
S+T S FN N+ TSS + G + +P++ S H+L+ Q S EN
Sbjct: 91 SLTMSQFNSMTGNEPSTSSNVFSASIPTTSGTQINASQPMIPTTSMHNLAVQSSMMLENK 150
Query: 428 SPALLQLVT 402
L L T
Sbjct: 151 LGQNLNLKT 159
>AF519109-1|AAM74223.1| 972|Caenorhabditis elegans EOR-2A protein.
Length = 972
Score = 27.5 bits (58), Expect = 8.4
Identities = 21/69 (30%), Positives = 30/69 (43%)
Frame = -1
Query: 608 SVTGSPFN*SCTNQHCTSSCTICRAPLIAPGIKAQYFRPLLLGISTHSLSGQWSQTSENS 429
S+T S FN N+ TSS + G + +P++ S H+L+ Q S EN
Sbjct: 91 SLTMSQFNSMTGNEPSTSSNVFSASIPTTSGTQINASQPMIPTTSMHNLAVQSSMMLENK 150
Query: 428 SPALLQLVT 402
L L T
Sbjct: 151 LGQNLNLKT 159
>AF502570-1|AAM74152.1| 972|Caenorhabditis elegans EOR-2 protein.
Length = 972
Score = 27.5 bits (58), Expect = 8.4
Identities = 21/69 (30%), Positives = 30/69 (43%)
Frame = -1
Query: 608 SVTGSPFN*SCTNQHCTSSCTICRAPLIAPGIKAQYFRPLLLGISTHSLSGQWSQTSENS 429
S+T S FN N+ TSS + G + +P++ S H+L+ Q S EN
Sbjct: 91 SLTMSQFNSMTGNEPSTSSNVFSASIPTTSGTQINASQPMIPTTSMHNLAVQSSMMLENK 150
Query: 428 SPALLQLVT 402
L L T
Sbjct: 151 LGQNLNLKT 159
>AF003141-10|AAK21487.1| 612|Caenorhabditis elegans Uncoordinated
protein 37 protein.
Length = 612
Score = 27.5 bits (58), Expect = 8.4
Identities = 15/71 (21%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = +1
Query: 94 KESYTNSSTHFYKMSRQTSRLDAKKVNSELLTLTYGALVSQMLKETENTEDVNKHL-ERI 270
K+ + S H + ++ +K N +TY + + + + E++NK L E I
Sbjct: 13 KDEHAEMSKHVNQQRSDIEKVALEKENMNRSYMTYAEVSNTLRSDLRKAEEINKRLQEFI 72
Query: 271 GYNMGVRLIED 303
++ +L +D
Sbjct: 73 MQSLAPQLSQD 83
>AF001272-1|AAB84235.1| 612|Caenorhabditis elegans enhancer of
split groucho protein.
Length = 612
Score = 27.5 bits (58), Expect = 8.4
Identities = 15/71 (21%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = +1
Query: 94 KESYTNSSTHFYKMSRQTSRLDAKKVNSELLTLTYGALVSQMLKETENTEDVNKHL-ERI 270
K+ + S H + ++ +K N +TY + + + + E++NK L E I
Sbjct: 13 KDEHAEMSKHVNQQRSDIEKVALEKENMNRSYMTYAEVSNTLRSDLRKAEEINKRLQEFI 72
Query: 271 GYNMGVRLIED 303
++ +L +D
Sbjct: 73 MQSLAPQLSQD 83
>AF001271-1|AAB84234.1| 612|Caenorhabditis elegans enhancer of
split groucho protein.
Length = 612
Score = 27.5 bits (58), Expect = 8.4
Identities = 15/71 (21%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = +1
Query: 94 KESYTNSSTHFYKMSRQTSRLDAKKVNSELLTLTYGALVSQMLKETENTEDVNKHL-ERI 270
K+ + S H + ++ +K N +TY + + + + E++NK L E I
Sbjct: 13 KDEHAEMSKHVNQQRSDIEKVALEKENMNRSYMTYAEVSNTLRSDLRKAEEINKRLQEFI 72
Query: 271 GYNMGVRLIED 303
++ +L +D
Sbjct: 73 MQSLAPQLSQD 83
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,555,649
Number of Sequences: 27780
Number of extensions: 275812
Number of successful extensions: 915
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 879
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 913
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1395683256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -