Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt9j14
(654 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC26H5.05 |||IPT/TIG ankyrin repeat protein|Schizosaccharomyce... 36 0.004
SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|ch... 33 0.036
SPCC74.09 |mug24||RNA-binding protein, rrm type|Schizosaccharomy... 31 0.15
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 29 0.59
SPCP1E11.10 |||ankyrin repeat protein, unknown biological role|S... 29 0.77
SPAC6C3.08 |||gankyrin|Schizosaccharomyces pombe|chr 1|||Manual 29 0.77
SPBP4H10.03 |oxa102|oxa1, oxa1-2, oxa1sp2|mitochondrial inner me... 28 1.4
SPAC4G9.17c |mrps5||mitochondrial ribosomal protein subunit S5|S... 27 1.8
SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe... 27 1.8
SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13... 27 2.4
SPAC23G3.12c |||serine protease |Schizosaccharomyces pombe|chr 1... 26 5.5
SPBC19G7.18c ||SPBC19G7.11c|sequence orphan|Schizosaccharomyces ... 26 5.5
SPCC553.01c ||SPCC736.01c|meiotic chromosome segregation protein... 25 9.5
SPBP16F5.05c |||ribosome biogenesis protein Nop8|Schizosaccharom... 25 9.5
SPAC1F8.02c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 25 9.5
>SPAC26H5.05 |||IPT/TIG ankyrin repeat protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1151
Score = 36.3 bits (80), Expect = 0.004
Identities = 27/81 (33%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = +2
Query: 413 SSAPEAVVNLTLLWASYLARDELLPGVLDAGADIHYSDSSGLTALHLSAFSGAGRAAVFL 592
S+ + V T+L A L D P + +D + SG + LHL+A G A+ FL
Sbjct: 826 SNQSDDSVESTILAAFALVTDTTTPYL----SDFSLVNESGRSLLHLTAACGLSNASTFL 881
Query: 593 ISRGADVDFVPKY-FTPLHCA 652
+ G DV+ +TPLH A
Sbjct: 882 CNAGCDVNKRDALGYTPLHYA 902
>SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 642
Score = 33.1 bits (72), Expect = 0.036
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +2
Query: 446 LLWASYLARDELLPGVLDAGADIHYSDSSGLTALHLSAFSGAGRAAVFLISRG 604
L+WASY + + +L GAD+ +D +T LH S G + ++ G
Sbjct: 138 LMWASYHGNEPITNCLLRWGADVLATDEDKMTPLHWSIVGGNLKCMKLILKEG 190
Score = 31.1 bits (67), Expect = 0.15
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +2
Query: 509 DIHYSDSSGLTALHLSAFSGAGRAAVFLISRGADVDFV 622
D++ +D G TALH +A + FL+ GADV+ +
Sbjct: 26 DVNATDEGGATALHWAALNQQIPICKFLLEHGADVNAI 63
Score = 26.6 bits (56), Expect = 3.1
Identities = 14/55 (25%), Positives = 24/55 (43%)
Frame = +2
Query: 452 WASYLARDELLPGVLDAGADIHYSDSSGLTALHLSAFSGAGRAAVFLISRGADVD 616
WA+ + + ++ GAD D G LHL+ + + V+L+ VD
Sbjct: 74 WAAKRGSVKTVHYLVQHGADPLLKDKQGFNCLHLAVHAASPLLVVYLLHLDISVD 128
>SPCC74.09 |mug24||RNA-binding protein, rrm type|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 654
Score = 31.1 bits (67), Expect = 0.15
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +2
Query: 218 PSPPADDAPNMYHSFDVLAPDPDARLTDD 304
PSPP+ PNMY S + P P A TD+
Sbjct: 136 PSPPSTYYPNMYVSANTFIPMPYAHYTDN 164
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 29.1 bits (62), Expect = 0.59
Identities = 20/78 (25%), Positives = 40/78 (51%)
Frame = -1
Query: 510 SAPASKTPGNNSSRAKYEAHSKVKFTTASGAELMCSSMFSAVIKPHSKSSKNLPAPRVRA 331
S+ +S P ++SS + + K ++ S + + S+ + S+SS + + + +
Sbjct: 386 SSSSSSRPASSSSHSSSLSSHKSSSSSKSSSAPVSSAFYHN--STSSRSSSHSSSHSLSS 443
Query: 330 LSYNPLLAASSVNLASGS 277
LS P+L ASS +L + S
Sbjct: 444 LSSKPILTASSSSLLTSS 461
>SPCP1E11.10 |||ankyrin repeat protein, unknown biological
role|Schizosaccharomyces pombe|chr 3|||Manual
Length = 207
Score = 28.7 bits (61), Expect = 0.77
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = +2
Query: 494 LDAGADIHYSDSSGLTALHLSAFSGAGRAAVFLISRGADVD 616
LD+G + +D +G T +H + G L+ RG D++
Sbjct: 24 LDSGISPNAADENGYTPIHAAVSYGHSDLLKILVERGGDIN 64
>SPAC6C3.08 |||gankyrin|Schizosaccharomyces pombe|chr 1|||Manual
Length = 234
Score = 28.7 bits (61), Expect = 0.77
Identities = 15/52 (28%), Positives = 27/52 (51%)
Frame = +2
Query: 455 ASYLARDELLPGVLDAGADIHYSDSSGLTALHLSAFSGAGRAAVFLISRGAD 610
A+ + + +++ ++ A ++ SDS G T LH + G V L+ GAD
Sbjct: 148 AAAVGKIQVVKYLISQRAPLNTSDSYGFTPLHFALAEGHPDVGVELVRAGAD 199
>SPBP4H10.03 |oxa102|oxa1, oxa1-2, oxa1sp2|mitochondrial inner
membrane translocase Oxa102|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 409
Score = 27.9 bits (59), Expect = 1.4
Identities = 21/54 (38%), Positives = 28/54 (51%)
Frame = -1
Query: 438 FTTASGAELMCSSMFSAVIKPHSKSSKNLPAPRVRALSYNPLLAASSVNLASGS 277
F S A+L + S++IK H+ SS + P R + Y P L SS LAS S
Sbjct: 41 FKNFSFAKLGRNQRTSSLIKIHN-SSTSFPKSRSEKVVYTPSLPLSSSVLASFS 93
>SPAC4G9.17c |mrps5||mitochondrial ribosomal protein subunit
S5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 387
Score = 27.5 bits (58), Expect = 1.8
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Frame = -1
Query: 354 LPAPRVRALSYNPLLAASSVNLASGSGARTSKLWYMFGASS--AG-GEGPTKRYSLAFPG 184
+P +RAL + PL+ VN + + + G + AG GEG + YSLA+
Sbjct: 217 IPKSDLRALMFVPLVRRRVVNQTRKGKIASMYVLTVVGNRNGVAGFGEGKAESYSLAYKQ 276
Query: 183 SRADSSKSMFFTCLY 139
S + K+M + Y
Sbjct: 277 SCGRAVKNMVYIPRY 291
>SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 317
Score = 27.5 bits (58), Expect = 1.8
Identities = 36/154 (23%), Positives = 61/154 (39%), Gaps = 6/154 (3%)
Frame = -1
Query: 630 YLGTKSTSAPRDIRNTAALPAPLKADKCKAVKPDESE**ISAPASKTPGNNSSRAKYEAH 451
Y T S+S P ++++ + K + S S+ +SK+ ++SS +K +
Sbjct: 145 YFITSSSSTPSSSSSSSSSSPSSSSSKSSSSSKSSSS---SSSSSKSSSSSSSSSKSSSS 201
Query: 450 SKVKF-TTASGAELMCSSMFSAV-----IKPHSKSSKNLPAPRVRALSYNPLLAASSVNL 289
S ++AS + SS FS+ P S SS + S + +ASS
Sbjct: 202 SSSSSKSSASPSSSKSSSKFSSSSFITSTTPASSSSSGAIVSNAKTASTDDSSSASSATS 261
Query: 288 ASGSGARTSKLWYMFGASSAGGEGPTKRYSLAFP 187
+ S ++ ASSA + S A P
Sbjct: 262 SVSSVVSSASSALSASASSASASVSSSASSDASP 295
>SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 777
Score = 27.1 bits (57), Expect = 2.4
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = -1
Query: 339 VRALSYNPLLAASSVNLASGSGARTSKLW 253
V A S+NP S LASGSG RT ++W
Sbjct: 510 VWACSFNPF----SRQLASGSGDRTIRIW 534
>SPAC23G3.12c |||serine protease |Schizosaccharomyces pombe|chr
1|||Manual
Length = 996
Score = 25.8 bits (54), Expect = 5.5
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -1
Query: 351 PAPRVRALSYNPLLAASSVNLASGSGART 265
P PR RA+++ + S+++ GSG T
Sbjct: 661 PMPRFRAINFESITVESNLSTQCGSGVLT 689
>SPBC19G7.18c ||SPBC19G7.11c|sequence orphan|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 252
Score = 25.8 bits (54), Expect = 5.5
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -2
Query: 554 TNVRQSNLTNPSSEYPPQRPKLRVITHPAPNT 459
T +RQ + SSE+PP+ K + + PNT
Sbjct: 109 TTMRQGRFPSSSSEFPPKNSKYQ-LPGSMPNT 139
>SPCC553.01c ||SPCC736.01c|meiotic chromosome segregation
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 715
Score = 25.0 bits (52), Expect = 9.5
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = -2
Query: 554 TNVRQSNLTNPSSEYPPQRPKLRVITHPA 468
++V +SN N +S YPP + + P+
Sbjct: 193 SSVEESNRANNTSPYPPSNSSVTALPKPS 221
>SPBP16F5.05c |||ribosome biogenesis protein
Nop8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 146
Score = 25.0 bits (52), Expect = 9.5
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +2
Query: 512 IHYSDSSGLTALHLSAFSGAGRAAVFLISRGAD 610
I+ + SG TA+H +A +G L+ G D
Sbjct: 64 INAQNESGNTAMHWAALNGHAEICKLLLEAGGD 96
>SPAC1F8.02c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 226
Score = 25.0 bits (52), Expect = 9.5
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +2
Query: 467 ARDELLPGVLDAGADIHYSDSSGLT 541
A D +L + D+G ++H++D SG T
Sbjct: 93 ANDTVLE-ICDSGKEVHFTDMSGTT 116
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,880,615
Number of Sequences: 5004
Number of extensions: 61173
Number of successful extensions: 187
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 173
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 187
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 295793106
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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