Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt9j11
(657 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC014662-1|AAH14662.1| 688|Homo sapiens SCY1-like 3 (S. cerevis... 117 4e-26
AY144493-1|AAN41656.1| 742|Homo sapiens ezrin-binding protein P... 117 4e-26
AL117233-1|CAB55300.1| 688|Homo sapiens hypothetical protein pr... 117 4e-26
AL031297-3|CAB52564.2| 688|Homo sapiens ezrin-binding partner P... 117 4e-26
AL031297-2|CAI23518.1| 742|Homo sapiens ezrin-binding partner P... 117 4e-26
AL031297-1|CAI23517.1| 588|Homo sapiens ezrin-binding partner P... 117 4e-26
AF540957-1|AAN23123.1| 688|Homo sapiens ezrin-binding partner P... 117 4e-26
BC032638-1|AAH32638.1| 411|Homo sapiens methyl-CpG binding doma... 31 4.8
AF120993-1|AAD56597.1| 411|Homo sapiens methyl-CpG binding prot... 31 4.8
AF072242-1|AAC68871.1| 411|Homo sapiens methyl-CpG binding prot... 31 4.8
AF039701-1|AAC18050.1| 200|Homo sapiens antigen NY-CO-41 protein. 31 4.8
BC020955-1|AAH20955.1| 547|Homo sapiens TBC1D23 protein protein. 30 6.3
AK001908-1|BAA91973.1| 684|Homo sapiens protein ( Homo sapiens ... 30 6.3
AK001750-1|BAA91881.1| 532|Homo sapiens protein ( Homo sapiens ... 30 6.3
Z82901-1|CAI42864.2| 1593|Homo sapiens THO complex 2 protein. 30 8.3
AL030996-3|CAI42271.2| 1593|Homo sapiens THO complex 2 protein. 30 8.3
AL023575-1|CAO03594.1| 1593|Homo sapiens THO complex 2 protein. 30 8.3
AF441770-1|AAM28436.1| 1478|Homo sapiens Tho2 protein. 30 8.3
>BC014662-1|AAH14662.1| 688|Homo sapiens SCY1-like 3 (S.
cerevisiae) protein.
Length = 688
Score = 117 bits (281), Expect = 4e-26
Identities = 61/159 (38%), Positives = 90/159 (56%)
Frame = +1
Query: 4 ILNNLKCYDEETVAKQXXXXXXXXXXXXDATARREVIPYILEPCNERQQNSEHPGFFSLN 183
+L+ + C EE +A + + A + +PY+L P + Q E P S
Sbjct: 274 LLDRVSCLSEELIASRLVPLLLNQLVFAEPVAVKSFLPYLLGPKKDHAQG-ETPCLLSPA 332
Query: 184 VFKEHVKPRLLQLFSVRDSQIRMLLLMHFSKYIHVFTHEELSQHILPELLLGIKDTDDNL 363
+F+ V P LLQLF V + +RM+LL H Y+ FT E+L + ILP++LLG++DT D++
Sbjct: 333 LFQSRVIPVLLQLFEVHEEHVRMVLLSHIEAYVEHFTQEQLKKVILPQVLLGLRDTSDSI 392
Query: 364 VASTLICLSVLVPILGAAAVVGGKRSKYFTDGRPNCKNN 480
VA TL L+VLV +LG VVGG+R+K F P+ N
Sbjct: 393 VAITLHSLAVLVSLLGPEVVVGGERTKIFKRTAPSFTKN 431
>AY144493-1|AAN41656.1| 742|Homo sapiens ezrin-binding protein
PACE-1 protein.
Length = 742
Score = 117 bits (281), Expect = 4e-26
Identities = 61/159 (38%), Positives = 90/159 (56%)
Frame = +1
Query: 4 ILNNLKCYDEETVAKQXXXXXXXXXXXXDATARREVIPYILEPCNERQQNSEHPGFFSLN 183
+L+ + C EE +A + + A + +PY+L P + Q E P S
Sbjct: 274 LLDRVSCLSEELIASRLVPLLLNQLVFAEPVAVKSFLPYLLGPKKDHAQG-ETPCLLSPA 332
Query: 184 VFKEHVKPRLLQLFSVRDSQIRMLLLMHFSKYIHVFTHEELSQHILPELLLGIKDTDDNL 363
+F+ V P LLQLF V + +RM+LL H Y+ FT E+L + ILP++LLG++DT D++
Sbjct: 333 LFQSRVIPVLLQLFEVHEEHVRMVLLSHIEAYVEHFTQEQLKKVILPQVLLGLRDTSDSI 392
Query: 364 VASTLICLSVLVPILGAAAVVGGKRSKYFTDGRPNCKNN 480
VA TL L+VLV +LG VVGG+R+K F P+ N
Sbjct: 393 VAITLHSLAVLVSLLGPEVVVGGERTKIFKRTAPSFTKN 431
>AL117233-1|CAB55300.1| 688|Homo sapiens hypothetical protein
protein.
Length = 688
Score = 117 bits (281), Expect = 4e-26
Identities = 61/159 (38%), Positives = 90/159 (56%)
Frame = +1
Query: 4 ILNNLKCYDEETVAKQXXXXXXXXXXXXDATARREVIPYILEPCNERQQNSEHPGFFSLN 183
+L+ + C EE +A + + A + +PY+L P + Q E P S
Sbjct: 274 LLDRVSCLSEELIASRLVPLLLNQLVFAEPVAVKSFLPYLLGPKKDHAQG-ETPCLLSPA 332
Query: 184 VFKEHVKPRLLQLFSVRDSQIRMLLLMHFSKYIHVFTHEELSQHILPELLLGIKDTDDNL 363
+F+ V P LLQLF V + +RM+LL H Y+ FT E+L + ILP++LLG++DT D++
Sbjct: 333 LFQSRVIPVLLQLFEVHEEHVRMVLLSHIEAYVEHFTQEQLKKVILPQVLLGLRDTSDSI 392
Query: 364 VASTLICLSVLVPILGAAAVVGGKRSKYFTDGRPNCKNN 480
VA TL L+VLV +LG VVGG+R+K F P+ N
Sbjct: 393 VAITLHSLAVLVSLLGPEVVVGGERTKIFKRTAPSFTKN 431
>AL031297-3|CAB52564.2| 688|Homo sapiens ezrin-binding partner
PACE-1 (PACE-1) protein.
Length = 688
Score = 117 bits (281), Expect = 4e-26
Identities = 61/159 (38%), Positives = 90/159 (56%)
Frame = +1
Query: 4 ILNNLKCYDEETVAKQXXXXXXXXXXXXDATARREVIPYILEPCNERQQNSEHPGFFSLN 183
+L+ + C EE +A + + A + +PY+L P + Q E P S
Sbjct: 274 LLDRVSCLSEELIASRLVPLLLNQLVFAEPVAVKSFLPYLLGPKKDHAQG-ETPCLLSPA 332
Query: 184 VFKEHVKPRLLQLFSVRDSQIRMLLLMHFSKYIHVFTHEELSQHILPELLLGIKDTDDNL 363
+F+ V P LLQLF V + +RM+LL H Y+ FT E+L + ILP++LLG++DT D++
Sbjct: 333 LFQSRVIPVLLQLFEVHEEHVRMVLLSHIEAYVEHFTQEQLKKVILPQVLLGLRDTSDSI 392
Query: 364 VASTLICLSVLVPILGAAAVVGGKRSKYFTDGRPNCKNN 480
VA TL L+VLV +LG VVGG+R+K F P+ N
Sbjct: 393 VAITLHSLAVLVSLLGPEVVVGGERTKIFKRTAPSFTKN 431
>AL031297-2|CAI23518.1| 742|Homo sapiens ezrin-binding partner
PACE-1 (PACE-1) protein.
Length = 742
Score = 117 bits (281), Expect = 4e-26
Identities = 61/159 (38%), Positives = 90/159 (56%)
Frame = +1
Query: 4 ILNNLKCYDEETVAKQXXXXXXXXXXXXDATARREVIPYILEPCNERQQNSEHPGFFSLN 183
+L+ + C EE +A + + A + +PY+L P + Q E P S
Sbjct: 274 LLDRVSCLSEELIASRLVPLLLNQLVFAEPVAVKSFLPYLLGPKKDHAQG-ETPCLLSPA 332
Query: 184 VFKEHVKPRLLQLFSVRDSQIRMLLLMHFSKYIHVFTHEELSQHILPELLLGIKDTDDNL 363
+F+ V P LLQLF V + +RM+LL H Y+ FT E+L + ILP++LLG++DT D++
Sbjct: 333 LFQSRVIPVLLQLFEVHEEHVRMVLLSHIEAYVEHFTQEQLKKVILPQVLLGLRDTSDSI 392
Query: 364 VASTLICLSVLVPILGAAAVVGGKRSKYFTDGRPNCKNN 480
VA TL L+VLV +LG VVGG+R+K F P+ N
Sbjct: 393 VAITLHSLAVLVSLLGPEVVVGGERTKIFKRTAPSFTKN 431
>AL031297-1|CAI23517.1| 588|Homo sapiens ezrin-binding partner
PACE-1 (PACE-1) protein.
Length = 588
Score = 117 bits (281), Expect = 4e-26
Identities = 61/159 (38%), Positives = 90/159 (56%)
Frame = +1
Query: 4 ILNNLKCYDEETVAKQXXXXXXXXXXXXDATARREVIPYILEPCNERQQNSEHPGFFSLN 183
+L+ + C EE +A + + A + +PY+L P + Q E P S
Sbjct: 274 LLDRVSCLSEELIASRLVPLLLNQLVFAEPVAVKSFLPYLLGPKKDHAQG-ETPCLLSPA 332
Query: 184 VFKEHVKPRLLQLFSVRDSQIRMLLLMHFSKYIHVFTHEELSQHILPELLLGIKDTDDNL 363
+F+ V P LLQLF V + +RM+LL H Y+ FT E+L + ILP++LLG++DT D++
Sbjct: 333 LFQSRVIPVLLQLFEVHEEHVRMVLLSHIEAYVEHFTQEQLKKVILPQVLLGLRDTSDSI 392
Query: 364 VASTLICLSVLVPILGAAAVVGGKRSKYFTDGRPNCKNN 480
VA TL L+VLV +LG VVGG+R+K F P+ N
Sbjct: 393 VAITLHSLAVLVSLLGPEVVVGGERTKIFKRTAPSFTKN 431
>AF540957-1|AAN23123.1| 688|Homo sapiens ezrin-binding partner
PACE-1 protein.
Length = 688
Score = 117 bits (281), Expect = 4e-26
Identities = 61/159 (38%), Positives = 90/159 (56%)
Frame = +1
Query: 4 ILNNLKCYDEETVAKQXXXXXXXXXXXXDATARREVIPYILEPCNERQQNSEHPGFFSLN 183
+L+ + C EE +A + + A + +PY+L P + Q E P S
Sbjct: 274 LLDRVSCLSEELIASRLVPLLLNQLVFAEPVAVKSFLPYLLGPKKDHAQG-ETPCLLSPA 332
Query: 184 VFKEHVKPRLLQLFSVRDSQIRMLLLMHFSKYIHVFTHEELSQHILPELLLGIKDTDDNL 363
+F+ V P LLQLF V + +RM+LL H Y+ FT E+L + ILP++LLG++DT D++
Sbjct: 333 LFQSRVIPVLLQLFEVHEEHVRMVLLSHIEAYVEHFTQEQLKKVILPQVLLGLRDTSDSI 392
Query: 364 VASTLICLSVLVPILGAAAVVGGKRSKYFTDGRPNCKNN 480
VA TL L+VLV +LG VVGG+R+K F P+ N
Sbjct: 393 VAITLHSLAVLVSLLGPEVVVGGERTKIFKRTAPSFTKN 431
>BC032638-1|AAH32638.1| 411|Homo sapiens methyl-CpG binding domain
protein 2 protein.
Length = 411
Score = 30.7 bits (66), Expect = 4.8
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Frame = +1
Query: 319 LPELLLGIK--DTDDNLVASTLICLSVL-VPILG-AAAVVGGKRSKYFTDGRPNCKNNLI 486
LP+ L G+ D+ L+++ L PI G +A V + + +P CK ++
Sbjct: 305 LPKGLQGVGPGSNDETLLSAVASALHTSSAPITGQVSAAVEKNPAVWLNTSQPLCKAFIV 364
Query: 487 KSTSINKQDKKVYLLEKSLRE 549
I KQ+++V + K L E
Sbjct: 365 TDEDIRKQEERVQQVRKKLEE 385
>AF120993-1|AAD56597.1| 411|Homo sapiens methyl-CpG binding protein
2 protein.
Length = 411
Score = 30.7 bits (66), Expect = 4.8
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Frame = +1
Query: 319 LPELLLGIK--DTDDNLVASTLICLSVL-VPILG-AAAVVGGKRSKYFTDGRPNCKNNLI 486
LP+ L G+ D+ L+++ L PI G +A V + + +P CK ++
Sbjct: 305 LPKGLQGVGPGSNDETLLSAVASALHTSSAPITGQVSAAVEKNPAVWLNTSQPLCKAFIV 364
Query: 487 KSTSINKQDKKVYLLEKSLRE 549
I KQ+++V + K L E
Sbjct: 365 TDEDIRKQEERVQQVRKKLEE 385
>AF072242-1|AAC68871.1| 411|Homo sapiens methyl-CpG binding protein
MBD2 protein.
Length = 411
Score = 30.7 bits (66), Expect = 4.8
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Frame = +1
Query: 319 LPELLLGIK--DTDDNLVASTLICLSVL-VPILG-AAAVVGGKRSKYFTDGRPNCKNNLI 486
LP+ L G+ D+ L+++ L PI G +A V + + +P CK ++
Sbjct: 305 LPKGLQGVGPGSNDETLLSAVASALHTSSAPITGQVSAAVEKNPAVWLNTSQPLCKAFIV 364
Query: 487 KSTSINKQDKKVYLLEKSLRE 549
I KQ+++V + K L E
Sbjct: 365 TDEDIRKQEERVQQVRKKLEE 385
>AF039701-1|AAC18050.1| 200|Homo sapiens antigen NY-CO-41 protein.
Length = 200
Score = 30.7 bits (66), Expect = 4.8
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Frame = +1
Query: 319 LPELLLGIK--DTDDNLVASTLICLSVL-VPILG-AAAVVGGKRSKYFTDGRPNCKNNLI 486
LP+ L G+ D+ L+++ L PI G +A V + + +P CK ++
Sbjct: 94 LPKGLQGVGPGSNDETLLSAVASALHTSSAPITGQVSAAVEKNPAVWLNTSQPLCKAFIV 153
Query: 487 KSTSINKQDKKVYLLEKSLRE 549
I KQ+++V + K L E
Sbjct: 154 TDEDIRKQEERVQQVRKKLEE 174
>BC020955-1|AAH20955.1| 547|Homo sapiens TBC1D23 protein protein.
Length = 547
Score = 30.3 bits (65), Expect = 6.3
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +1
Query: 307 SQHILPELLLGIKDTDDNLVASTLICLSVLVPILGAAAVVGGKRSKYF-TDGRP 465
+ H+ LLGIKD D +L S +CL++ V + A + G+ ++F D RP
Sbjct: 142 NHHLFGSTLLGIKDDDADL--SQALCLAISVSEILQANQLQGEGVRFFVVDCRP 193
>AK001908-1|BAA91973.1| 684|Homo sapiens protein ( Homo sapiens
cDNA FLJ11046 fis, clone PLACE1004473. ).
Length = 684
Score = 30.3 bits (65), Expect = 6.3
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +1
Query: 307 SQHILPELLLGIKDTDDNLVASTLICLSVLVPILGAAAVVGGKRSKYF-TDGRP 465
+ H+ LLGIKD D +L S +CL++ V + A + G+ ++F D RP
Sbjct: 294 NHHLFGSTLLGIKDDDADL--SQALCLAISVSEILQANQLQGEGVRFFVVDCRP 345
>AK001750-1|BAA91881.1| 532|Homo sapiens protein ( Homo sapiens
cDNA FLJ10888 fis, clone NT2RP4002052. ).
Length = 532
Score = 30.3 bits (65), Expect = 6.3
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +1
Query: 307 SQHILPELLLGIKDTDDNLVASTLICLSVLVPILGAAAVVGGKRSKYF-TDGRP 465
+ H+ LLGIKD D +L S +CL++ V + A + G+ ++F D RP
Sbjct: 142 NHHLFGSTLLGIKDDDADL--SQALCLAISVSEILQANQLQGEGVRFFVVDCRP 193
>Z82901-1|CAI42864.2| 1593|Homo sapiens THO complex 2 protein.
Length = 1593
Score = 29.9 bits (64), Expect = 8.3
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = -2
Query: 611 IFVKVVRPVLSFS*TSSEQGNSLNDFSKRYTFLSCLLMLVDFIKL 477
+F KVVR SF G+ D K LSCLL + D + L
Sbjct: 448 LFAKVVRIGKSFMKEFQSDGSKQEDKEKTEVILSCLLSITDQVLL 492
>AL030996-3|CAI42271.2| 1593|Homo sapiens THO complex 2 protein.
Length = 1593
Score = 29.9 bits (64), Expect = 8.3
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = -2
Query: 611 IFVKVVRPVLSFS*TSSEQGNSLNDFSKRYTFLSCLLMLVDFIKL 477
+F KVVR SF G+ D K LSCLL + D + L
Sbjct: 448 LFAKVVRIGKSFMKEFQSDGSKQEDKEKTEVILSCLLSITDQVLL 492
>AL023575-1|CAO03594.1| 1593|Homo sapiens THO complex 2 protein.
Length = 1593
Score = 29.9 bits (64), Expect = 8.3
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = -2
Query: 611 IFVKVVRPVLSFS*TSSEQGNSLNDFSKRYTFLSCLLMLVDFIKL 477
+F KVVR SF G+ D K LSCLL + D + L
Sbjct: 448 LFAKVVRIGKSFMKEFQSDGSKQEDKEKTEVILSCLLSITDQVLL 492
>AF441770-1|AAM28436.1| 1478|Homo sapiens Tho2 protein.
Length = 1478
Score = 29.9 bits (64), Expect = 8.3
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = -2
Query: 611 IFVKVVRPVLSFS*TSSEQGNSLNDFSKRYTFLSCLLMLVDFIKL 477
+F KVVR SF G+ D K LSCLL + D + L
Sbjct: 333 LFAKVVRIGKSFMKEFQSDGSKQEDKEKTEVILSCLLSITDQVLL 377
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,723,118
Number of Sequences: 237096
Number of extensions: 1547032
Number of successful extensions: 3315
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 3192
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3315
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7366354010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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