Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt9j08
(668 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 314 3e-86
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 314 3e-86
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 314 3e-86
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 314 3e-86
U61944-2|AAL56621.1| 705|Caenorhabditis elegans Dynamin related... 229 1e-60
U61944-1|AAL56622.1| 712|Caenorhabditis elegans Dynamin related... 229 1e-60
AF166274-1|AAD49861.1| 705|Caenorhabditis elegans dynamin-relat... 229 1e-60
Z47808-7|CAA87771.2| 934|Caenorhabditis elegans Hypothetical pr... 82 3e-16
U50308-3|AAW88404.1| 1392|Caenorhabditis elegans Gut granule los... 29 2.3
AF077544-3|AAK39242.3| 458|Caenorhabditis elegans Hypothetical ... 28 5.2
Z49938-4|CAA90189.3| 2180|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z46811-1|CAA86842.3| 2180|Caenorhabditis elegans Hypothetical pr... 27 9.1
AF548287-1|AAN40683.1| 2238|Caenorhabditis elegans poly ADP-ribo... 27 9.1
AF316539-1|AAK01632.1| 2200|Caenorhabditis elegans PTP-3A protein. 27 9.1
AF047664-2|AAC04454.2| 2276|Caenorhabditis elegans Poly(adp-ribo... 27 9.1
AF047664-1|AAO12392.1| 2238|Caenorhabditis elegans Poly(adp-ribo... 27 9.1
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 314 bits (772), Expect = 3e-86
Identities = 152/191 (79%), Positives = 167/191 (87%)
Frame = +3
Query: 96 NFGMQQLIPIVNKLQDAFVQMGVHMSLDLPQIAVVGGQSAGKSSVLENFVGRDFLPRGSG 275
N GMQ LIP++N++QDAF Q+G +S +LPQIAVVGGQSAGKSSVLENFVG+DFLPRGSG
Sbjct: 5 NQGMQALIPVINRVQDAFSQLGTSVSFELPQIAVVGGQSAGKSSVLENFVGKDFLPRGSG 64
Query: 276 IVTRRPLILQLINGNTEYAEFLHCKGKKFTDFNEVRGEIEAETDRVTGSNKGISPVPINL 455
IVTRRPLILQLI EYAEFLH KG +F DF+ VR EIE ETDRVTG NKGISP PINL
Sbjct: 65 IVTRRPLILQLIQDRNEYAEFLHKKGHRFVDFDAVRKEIEDETDRVTGQNKGISPHPINL 124
Query: 456 RVYSPNVLNLTLIDLPGLTKVPIGDQPIDIEQQIKGMIFQFIRRESCLILAVTPANTDLA 635
RV+SPNVLNLTLIDLPGLTKVP+GDQP DIEQQI+ MI FI RE+CLILAVTPAN+DLA
Sbjct: 125 RVFSPNVLNLTLIDLPGLTKVPVGDQPADIEQQIRDMILTFINRETCLILAVTPANSDLA 184
Query: 636 NSDALKLAKEV 668
SDALKLAKEV
Sbjct: 185 TSDALKLAKEV 195
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 314 bits (772), Expect = 3e-86
Identities = 152/191 (79%), Positives = 167/191 (87%)
Frame = +3
Query: 96 NFGMQQLIPIVNKLQDAFVQMGVHMSLDLPQIAVVGGQSAGKSSVLENFVGRDFLPRGSG 275
N GMQ LIP++N++QDAF Q+G +S +LPQIAVVGGQSAGKSSVLENFVG+DFLPRGSG
Sbjct: 5 NQGMQALIPVINRVQDAFSQLGTSVSFELPQIAVVGGQSAGKSSVLENFVGKDFLPRGSG 64
Query: 276 IVTRRPLILQLINGNTEYAEFLHCKGKKFTDFNEVRGEIEAETDRVTGSNKGISPVPINL 455
IVTRRPLILQLI EYAEFLH KG +F DF+ VR EIE ETDRVTG NKGISP PINL
Sbjct: 65 IVTRRPLILQLIQDRNEYAEFLHKKGHRFVDFDAVRKEIEDETDRVTGQNKGISPHPINL 124
Query: 456 RVYSPNVLNLTLIDLPGLTKVPIGDQPIDIEQQIKGMIFQFIRRESCLILAVTPANTDLA 635
RV+SPNVLNLTLIDLPGLTKVP+GDQP DIEQQI+ MI FI RE+CLILAVTPAN+DLA
Sbjct: 125 RVFSPNVLNLTLIDLPGLTKVPVGDQPADIEQQIRDMILTFINRETCLILAVTPANSDLA 184
Query: 636 NSDALKLAKEV 668
SDALKLAKEV
Sbjct: 185 TSDALKLAKEV 195
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 314 bits (772), Expect = 3e-86
Identities = 152/191 (79%), Positives = 167/191 (87%)
Frame = +3
Query: 96 NFGMQQLIPIVNKLQDAFVQMGVHMSLDLPQIAVVGGQSAGKSSVLENFVGRDFLPRGSG 275
N GMQ LIP++N++QDAF Q+G +S +LPQIAVVGGQSAGKSSVLENFVG+DFLPRGSG
Sbjct: 5 NQGMQALIPVINRVQDAFSQLGTSVSFELPQIAVVGGQSAGKSSVLENFVGKDFLPRGSG 64
Query: 276 IVTRRPLILQLINGNTEYAEFLHCKGKKFTDFNEVRGEIEAETDRVTGSNKGISPVPINL 455
IVTRRPLILQLI EYAEFLH KG +F DF+ VR EIE ETDRVTG NKGISP PINL
Sbjct: 65 IVTRRPLILQLIQDRNEYAEFLHKKGHRFVDFDAVRKEIEDETDRVTGQNKGISPHPINL 124
Query: 456 RVYSPNVLNLTLIDLPGLTKVPIGDQPIDIEQQIKGMIFQFIRRESCLILAVTPANTDLA 635
RV+SPNVLNLTLIDLPGLTKVP+GDQP DIEQQI+ MI FI RE+CLILAVTPAN+DLA
Sbjct: 125 RVFSPNVLNLTLIDLPGLTKVPVGDQPADIEQQIRDMILTFINRETCLILAVTPANSDLA 184
Query: 636 NSDALKLAKEV 668
SDALKLAKEV
Sbjct: 185 TSDALKLAKEV 195
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 314 bits (772), Expect = 3e-86
Identities = 152/191 (79%), Positives = 167/191 (87%)
Frame = +3
Query: 96 NFGMQQLIPIVNKLQDAFVQMGVHMSLDLPQIAVVGGQSAGKSSVLENFVGRDFLPRGSG 275
N GMQ LIP++N++QDAF Q+G +S +LPQIAVVGGQSAGKSSVLENFVG+DFLPRGSG
Sbjct: 5 NQGMQALIPVINRVQDAFSQLGTSVSFELPQIAVVGGQSAGKSSVLENFVGKDFLPRGSG 64
Query: 276 IVTRRPLILQLINGNTEYAEFLHCKGKKFTDFNEVRGEIEAETDRVTGSNKGISPVPINL 455
IVTRRPLILQLI EYAEFLH KG +F DF+ VR EIE ETDRVTG NKGISP PINL
Sbjct: 65 IVTRRPLILQLIQDRNEYAEFLHKKGHRFVDFDAVRKEIEDETDRVTGQNKGISPHPINL 124
Query: 456 RVYSPNVLNLTLIDLPGLTKVPIGDQPIDIEQQIKGMIFQFIRRESCLILAVTPANTDLA 635
RV+SPNVLNLTLIDLPGLTKVP+GDQP DIEQQI+ MI FI RE+CLILAVTPAN+DLA
Sbjct: 125 RVFSPNVLNLTLIDLPGLTKVPVGDQPADIEQQIRDMILTFINRETCLILAVTPANSDLA 184
Query: 636 NSDALKLAKEV 668
SDALKLAKEV
Sbjct: 185 TSDALKLAKEV 195
>U61944-2|AAL56621.1| 705|Caenorhabditis elegans Dynamin related
protein protein1, isoform a protein.
Length = 705
Score = 229 bits (560), Expect = 1e-60
Identities = 121/205 (59%), Positives = 149/205 (72%), Gaps = 17/205 (8%)
Frame = +3
Query: 105 MQQLIPIVNKLQDAFVQMG-VHMSLDLPQIAVVGGQSAGKSSVLENFVGRDFLPRGSGIV 281
M+ LIP+VNKLQD F +G + LPQI VVG QSAGKSSVLEN VGRDFLPRG+GIV
Sbjct: 1 MENLIPVVNKLQDVFATLGRKEDQIQLPQIVVVGSQSAGKSSVLENLVGRDFLPRGTGIV 60
Query: 282 TRRPLILQL-------------INGNT---EYAEFLHCKGKKFTDFNEVRGEIEAETDRV 413
TRRPLILQL NG ++A F H K FTDF+ VR EIE ETDRV
Sbjct: 61 TRRPLILQLNHVALDDESKRRRSNGTLLTDDWAMFEHTGSKVFTDFDAVRKEIEDETDRV 120
Query: 414 TGSNKGISPVPINLRVYSPNVLNLTLIDLPGLTKVPIGDQPIDIEQQIKGMIFQFIRRES 593
TG NKGIS +PI+L++YS V++L+L+DLPG+TK+P+GDQP++IE+QI+ MI +I S
Sbjct: 121 TGVNKGISLLPISLKIYSHRVVSLSLVDLPGITKIPVGDQPVNIEEQIREMILLYISNPS 180
Query: 594 CLILAVTPANTDLANSDALKLAKEV 668
+ILAVTPAN D A S+ +KLA+EV
Sbjct: 181 SIILAVTPANQDFATSEPIKLAREV 205
>U61944-1|AAL56622.1| 712|Caenorhabditis elegans Dynamin related
protein protein1, isoform b protein.
Length = 712
Score = 229 bits (560), Expect = 1e-60
Identities = 121/205 (59%), Positives = 149/205 (72%), Gaps = 17/205 (8%)
Frame = +3
Query: 105 MQQLIPIVNKLQDAFVQMG-VHMSLDLPQIAVVGGQSAGKSSVLENFVGRDFLPRGSGIV 281
M+ LIP+VNKLQD F +G + LPQI VVG QSAGKSSVLEN VGRDFLPRG+GIV
Sbjct: 1 MENLIPVVNKLQDVFATLGRKEDQIQLPQIVVVGSQSAGKSSVLENLVGRDFLPRGTGIV 60
Query: 282 TRRPLILQL-------------INGNT---EYAEFLHCKGKKFTDFNEVRGEIEAETDRV 413
TRRPLILQL NG ++A F H K FTDF+ VR EIE ETDRV
Sbjct: 61 TRRPLILQLNHVALDDESKRRRSNGTLLTDDWAMFEHTGSKVFTDFDAVRKEIEDETDRV 120
Query: 414 TGSNKGISPVPINLRVYSPNVLNLTLIDLPGLTKVPIGDQPIDIEQQIKGMIFQFIRRES 593
TG NKGIS +PI+L++YS V++L+L+DLPG+TK+P+GDQP++IE+QI+ MI +I S
Sbjct: 121 TGVNKGISLLPISLKIYSHRVVSLSLVDLPGITKIPVGDQPVNIEEQIREMILLYISNPS 180
Query: 594 CLILAVTPANTDLANSDALKLAKEV 668
+ILAVTPAN D A S+ +KLA+EV
Sbjct: 181 SIILAVTPANQDFATSEPIKLAREV 205
>AF166274-1|AAD49861.1| 705|Caenorhabditis elegans dynamin-related
protein protein.
Length = 705
Score = 229 bits (560), Expect = 1e-60
Identities = 121/205 (59%), Positives = 149/205 (72%), Gaps = 17/205 (8%)
Frame = +3
Query: 105 MQQLIPIVNKLQDAFVQMG-VHMSLDLPQIAVVGGQSAGKSSVLENFVGRDFLPRGSGIV 281
M+ LIP+VNKLQD F +G + LPQI VVG QSAGKSSVLEN VGRDFLPRG+GIV
Sbjct: 1 MENLIPVVNKLQDVFATLGRKEDQIQLPQIVVVGSQSAGKSSVLENLVGRDFLPRGTGIV 60
Query: 282 TRRPLILQL-------------INGNT---EYAEFLHCKGKKFTDFNEVRGEIEAETDRV 413
TRRPLILQL NG ++A F H K FTDF+ VR EIE ETDRV
Sbjct: 61 TRRPLILQLNHVALDDESKRRRSNGTLLTDDWAMFEHTGSKVFTDFDAVRKEIEDETDRV 120
Query: 414 TGSNKGISPVPINLRVYSPNVLNLTLIDLPGLTKVPIGDQPIDIEQQIKGMIFQFIRRES 593
TG NKGIS +PI+L++YS V++L+L+DLPG+TK+P+GDQP++IE+QI+ MI +I S
Sbjct: 121 TGVNKGISLLPISLKIYSHRVVSLSLVDLPGITKIPVGDQPVNIEEQIREMILLYISNPS 180
Query: 594 CLILAVTPANTDLANSDALKLAKEV 668
+ILAVTPAN D A S+ +KLA+EV
Sbjct: 181 SIILAVTPANQDFATSEPIKLAREV 205
>Z47808-7|CAA87771.2| 934|Caenorhabditis elegans Hypothetical
protein D2013.5 protein.
Length = 934
Score = 82.2 bits (194), Expect = 3e-16
Identities = 52/169 (30%), Positives = 79/169 (46%), Gaps = 5/169 (2%)
Frame = +3
Query: 177 DLPQIAVVGGQSAGKSSVLENFVGRDFLPRGSG-IVTRRPLILQLINGNTEYAEFLHCKG 353
+LP++ VVG QSAGK+SVLE PRGSG ++TR P+ + L G A+F
Sbjct: 286 NLPRVVVVGDQSAGKTSVLEMVAQARIFPRGSGEMMTRAPVKVTLSEGPYHVAQFRDSSR 345
Query: 354 K----KFTDFNEVRGEIEAETDRVTGSNKGISPVPINLRVYSPNVLNLTLIDLPGLTKVP 521
+ K TD ++R E E K +S I+L V PN+ + L+DLPG+
Sbjct: 346 EFDLTKETDLQQLRNETEVRMRNSVRDGKTVSNEVISLTVKGPNLPRMVLVDLPGVISTV 405
Query: 522 IGDQPIDIEQQIKGMIFQFIRRESCLILAVTPANTDLANSDALKLAKEV 668
D + + I M + + +IL + + D S+ L +
Sbjct: 406 TADMARETKDDIIRMSKAHMENPNAIILCIQDGSVDAERSNVTDLVSSI 454
>U50308-3|AAW88404.1| 1392|Caenorhabditis elegans Gut granule loss
protein 4 protein.
Length = 1392
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 65 ILMYYIKNGWKFWNAAVDSYRKQITRCIC 151
+L+Y IKN + WN A + R QI +C
Sbjct: 598 VLLYIIKNRLQIWNEANSTDRLQIMSLVC 626
>AF077544-3|AAK39242.3| 458|Caenorhabditis elegans Hypothetical
protein H22K11.4a protein.
Length = 458
Score = 28.3 bits (60), Expect = 5.2
Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 9/80 (11%)
Frame = +3
Query: 75 IILKMAGNFGMQQLIPIVNKLQDAFVQMGVHMSLDLP----QIAVVGGQSAGKSSVLEN- 239
+I K NF +QQ + ++N ++D+ Q +LP + + K S LEN
Sbjct: 97 VIAKRLDNFDIQQRMVVINLVEDSLYQGNTQQVFELPINGLDVEDLVSNRDRKISQLENS 156
Query: 240 ----FVGRDFLPRGSGIVTR 287
F GR+ P +G+ +R
Sbjct: 157 LRNTFRGRNVNPYIAGVRSR 176
>Z49938-4|CAA90189.3| 2180|Caenorhabditis elegans Hypothetical
protein C09D8.1a protein.
Length = 2180
Score = 27.5 bits (58), Expect = 9.1
Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 2/61 (3%)
Frame = -2
Query: 316 PFISCRINGRRVTMPEPLGKKSLPTKFS--KTELFPAD*PPTTAICGRSKDMCTPICTNA 143
P + R+NG+ +T + KSL T S + E D T C + P+ A
Sbjct: 77 PSVIWRVNGKSITDHNRISIKSLATGLSTLRFERVSLDDNATVVSCSADNGVANPVVAEA 136
Query: 142 S 140
S
Sbjct: 137 S 137
>Z46811-1|CAA86842.3| 2180|Caenorhabditis elegans Hypothetical
protein C09D8.1a protein.
Length = 2180
Score = 27.5 bits (58), Expect = 9.1
Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 2/61 (3%)
Frame = -2
Query: 316 PFISCRINGRRVTMPEPLGKKSLPTKFS--KTELFPAD*PPTTAICGRSKDMCTPICTNA 143
P + R+NG+ +T + KSL T S + E D T C + P+ A
Sbjct: 77 PSVIWRVNGKSITDHNRISIKSLATGLSTLRFERVSLDDNATVVSCSADNGVANPVVAEA 136
Query: 142 S 140
S
Sbjct: 137 S 137
>AF548287-1|AAN40683.1| 2238|Caenorhabditis elegans poly ADP-ribose
metabolism enzyme-5 protein.
Length = 2238
Score = 27.5 bits (58), Expect = 9.1
Identities = 16/50 (32%), Positives = 21/50 (42%)
Frame = +3
Query: 216 GKSSVLENFVGRDFLPRGSGIVTRRPLILQLINGNTEYAEFLHCKGKKFT 365
G + + V + L G R PLI ++NG A FL KG T
Sbjct: 510 GYLEMAKKLVEKGALVEGKDKKKRTPLIHAMLNGQIHTAAFLLAKGASLT 559
>AF316539-1|AAK01632.1| 2200|Caenorhabditis elegans PTP-3A protein.
Length = 2200
Score = 27.5 bits (58), Expect = 9.1
Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 2/61 (3%)
Frame = -2
Query: 316 PFISCRINGRRVTMPEPLGKKSLPTKFS--KTELFPAD*PPTTAICGRSKDMCTPICTNA 143
P + R+NG+ +T + KSL T S + E D T C + P+ A
Sbjct: 77 PSVIWRVNGKSITDHNRISIKSLATGLSTLRFERVSLDDNATVVSCSADNGVANPVVAEA 136
Query: 142 S 140
S
Sbjct: 137 S 137
>AF047664-2|AAC04454.2| 2276|Caenorhabditis elegans Poly(adp-ribose)
metabolism enzymeprotein 5, isoform a protein.
Length = 2276
Score = 27.5 bits (58), Expect = 9.1
Identities = 16/50 (32%), Positives = 21/50 (42%)
Frame = +3
Query: 216 GKSSVLENFVGRDFLPRGSGIVTRRPLILQLINGNTEYAEFLHCKGKKFT 365
G + + V + L G R PLI ++NG A FL KG T
Sbjct: 510 GYLEMAKKLVEKGALVEGKDKKKRTPLIHAMLNGQIHTAAFLLAKGASLT 559
>AF047664-1|AAO12392.1| 2238|Caenorhabditis elegans Poly(adp-ribose)
metabolism enzymeprotein 5, isoform b protein.
Length = 2238
Score = 27.5 bits (58), Expect = 9.1
Identities = 16/50 (32%), Positives = 21/50 (42%)
Frame = +3
Query: 216 GKSSVLENFVGRDFLPRGSGIVTRRPLILQLINGNTEYAEFLHCKGKKFT 365
G + + V + L G R PLI ++NG A FL KG T
Sbjct: 510 GYLEMAKKLVEKGALVEGKDKKKRTPLIHAMLNGQIHTAAFLLAKGASLT 559
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,788,805
Number of Sequences: 27780
Number of extensions: 340909
Number of successful extensions: 1074
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1033
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1069
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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