Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt9j04
(705 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY061508-1|AAL29056.1| 299|Drosophila melanogaster LD46344p pro... 305 5e-83
AE013599-2777|AAM68447.1| 243|Drosophila melanogaster CG15081-P... 305 5e-83
AE013599-2776|AAF57631.2| 243|Drosophila melanogaster CG15081-P... 305 5e-83
AE013599-2775|AAF57632.2| 243|Drosophila melanogaster CG15081-P... 305 5e-83
AY122111-1|AAM52623.1| 276|Drosophila melanogaster GH12454p pro... 198 5e-51
AE014134-3047|AAF53765.1| 276|Drosophila melanogaster CG10691-P... 198 5e-51
AE014134-3046|AAN11026.1| 276|Drosophila melanogaster CG10691-P... 198 5e-51
X04228-3|CAA27810.1| 203|Drosophila melanogaster protein ( Dros... 99 3e-21
X04227-3|CAA27807.1| 203|Drosophila melanogaster URF 3 protein. 99 3e-21
BT010318-1|AAQ23636.1| 342|Drosophila melanogaster AT20211p pro... 31 1.2
AE014296-2601|AAF49563.2| 342|Drosophila melanogaster CG10516-P... 31 1.2
>AY061508-1|AAL29056.1| 299|Drosophila melanogaster LD46344p
protein.
Length = 299
Score = 305 bits (748), Expect = 5e-83
Identities = 147/202 (72%), Positives = 167/202 (82%)
Frame = +3
Query: 99 MAQSKINDMAGKFAXXXXXXXXXXXXXXXXXXXXXXXXSQSVFTVEGGHRAIMFNRIGGV 278
MAQSK+ND+AGK SQS++TVEGGHRAI+F+R+GG+
Sbjct: 1 MAQSKLNDLAGKLGKGGPPGLGIGLKVLAAVGAAAYGVSQSLYTVEGGHRAIIFSRLGGI 60
Query: 279 QQHVFTEGMHFRIPWFQYPIIYDIRSRPRKISSPTGSKDLQMVNISLRVLSRPDANMLAT 458
Q +++EG+H RIPWFQYPIIYDIRSRPRKISSPTGSKDLQM+NISLRVLSRPD+ L
Sbjct: 61 QSDIYSEGLHVRIPWFQYPIIYDIRSRPRKISSPTGSKDLQMINISLRVLSRPDSLNLPY 120
Query: 459 MYRQLGTDYDEKVLPSICNEVLKSVVAKFNASQLITQRQQVSLLIRRELVERAADFNIIL 638
+++QLG DYDEKVLPSICNEVLKSV+AKFNASQLITQRQQVSLLIR+ELVERA DFNIIL
Sbjct: 121 LHKQLGVDYDEKVLPSICNEVLKSVIAKFNASQLITQRQQVSLLIRKELVERARDFNIIL 180
Query: 639 DDVSLTELSFGKEYTAAVEAKQ 704
DDVSLTELSFGKEYTAA+EAKQ
Sbjct: 181 DDVSLTELSFGKEYTAAIEAKQ 202
>AE013599-2777|AAM68447.1| 243|Drosophila melanogaster CG15081-PC,
isoform C protein.
Length = 243
Score = 305 bits (748), Expect = 5e-83
Identities = 147/202 (72%), Positives = 167/202 (82%)
Frame = +3
Query: 99 MAQSKINDMAGKFAXXXXXXXXXXXXXXXXXXXXXXXXSQSVFTVEGGHRAIMFNRIGGV 278
MAQSK+ND+AGK SQS++TVEGGHRAI+F+R+GG+
Sbjct: 1 MAQSKLNDLAGKLGKGGPPGLGIGLKVLAAVGAAAYGVSQSLYTVEGGHRAIIFSRLGGI 60
Query: 279 QQHVFTEGMHFRIPWFQYPIIYDIRSRPRKISSPTGSKDLQMVNISLRVLSRPDANMLAT 458
Q +++EG+H RIPWFQYPIIYDIRSRPRKISSPTGSKDLQM+NISLRVLSRPD+ L
Sbjct: 61 QSDIYSEGLHVRIPWFQYPIIYDIRSRPRKISSPTGSKDLQMINISLRVLSRPDSLNLPY 120
Query: 459 MYRQLGTDYDEKVLPSICNEVLKSVVAKFNASQLITQRQQVSLLIRRELVERAADFNIIL 638
+++QLG DYDEKVLPSICNEVLKSV+AKFNASQLITQRQQVSLLIR+ELVERA DFNIIL
Sbjct: 121 LHKQLGVDYDEKVLPSICNEVLKSVIAKFNASQLITQRQQVSLLIRKELVERARDFNIIL 180
Query: 639 DDVSLTELSFGKEYTAAVEAKQ 704
DDVSLTELSFGKEYTAA+EAKQ
Sbjct: 181 DDVSLTELSFGKEYTAAIEAKQ 202
>AE013599-2776|AAF57631.2| 243|Drosophila melanogaster CG15081-PB,
isoform B protein.
Length = 243
Score = 305 bits (748), Expect = 5e-83
Identities = 147/202 (72%), Positives = 167/202 (82%)
Frame = +3
Query: 99 MAQSKINDMAGKFAXXXXXXXXXXXXXXXXXXXXXXXXSQSVFTVEGGHRAIMFNRIGGV 278
MAQSK+ND+AGK SQS++TVEGGHRAI+F+R+GG+
Sbjct: 1 MAQSKLNDLAGKLGKGGPPGLGIGLKVLAAVGAAAYGVSQSLYTVEGGHRAIIFSRLGGI 60
Query: 279 QQHVFTEGMHFRIPWFQYPIIYDIRSRPRKISSPTGSKDLQMVNISLRVLSRPDANMLAT 458
Q +++EG+H RIPWFQYPIIYDIRSRPRKISSPTGSKDLQM+NISLRVLSRPD+ L
Sbjct: 61 QSDIYSEGLHVRIPWFQYPIIYDIRSRPRKISSPTGSKDLQMINISLRVLSRPDSLNLPY 120
Query: 459 MYRQLGTDYDEKVLPSICNEVLKSVVAKFNASQLITQRQQVSLLIRRELVERAADFNIIL 638
+++QLG DYDEKVLPSICNEVLKSV+AKFNASQLITQRQQVSLLIR+ELVERA DFNIIL
Sbjct: 121 LHKQLGVDYDEKVLPSICNEVLKSVIAKFNASQLITQRQQVSLLIRKELVERARDFNIIL 180
Query: 639 DDVSLTELSFGKEYTAAVEAKQ 704
DDVSLTELSFGKEYTAA+EAKQ
Sbjct: 181 DDVSLTELSFGKEYTAAIEAKQ 202
>AE013599-2775|AAF57632.2| 243|Drosophila melanogaster CG15081-PA,
isoform A protein.
Length = 243
Score = 305 bits (748), Expect = 5e-83
Identities = 147/202 (72%), Positives = 167/202 (82%)
Frame = +3
Query: 99 MAQSKINDMAGKFAXXXXXXXXXXXXXXXXXXXXXXXXSQSVFTVEGGHRAIMFNRIGGV 278
MAQSK+ND+AGK SQS++TVEGGHRAI+F+R+GG+
Sbjct: 1 MAQSKLNDLAGKLGKGGPPGLGIGLKVLAAVGAAAYGVSQSLYTVEGGHRAIIFSRLGGI 60
Query: 279 QQHVFTEGMHFRIPWFQYPIIYDIRSRPRKISSPTGSKDLQMVNISLRVLSRPDANMLAT 458
Q +++EG+H RIPWFQYPIIYDIRSRPRKISSPTGSKDLQM+NISLRVLSRPD+ L
Sbjct: 61 QSDIYSEGLHVRIPWFQYPIIYDIRSRPRKISSPTGSKDLQMINISLRVLSRPDSLNLPY 120
Query: 459 MYRQLGTDYDEKVLPSICNEVLKSVVAKFNASQLITQRQQVSLLIRRELVERAADFNIIL 638
+++QLG DYDEKVLPSICNEVLKSV+AKFNASQLITQRQQVSLLIR+ELVERA DFNIIL
Sbjct: 121 LHKQLGVDYDEKVLPSICNEVLKSVIAKFNASQLITQRQQVSLLIRKELVERARDFNIIL 180
Query: 639 DDVSLTELSFGKEYTAAVEAKQ 704
DDVSLTELSFGKEYTAA+EAKQ
Sbjct: 181 DDVSLTELSFGKEYTAAIEAKQ 202
>AY122111-1|AAM52623.1| 276|Drosophila melanogaster GH12454p
protein.
Length = 276
Score = 198 bits (484), Expect = 5e-51
Identities = 94/164 (57%), Positives = 124/164 (75%)
Frame = +3
Query: 213 SQSVFTVEGGHRAIMFNRIGGVQQHVFTEGMHFRIPWFQYPIIYDIRSRPRKISSPTGSK 392
+ +++ VEGGHRA++F+R G++++V EG HF IPW Q PII+DIRS+PR + TGSK
Sbjct: 24 NSALYNVEGGHRAVIFDRFTGIKENVVGEGTHFFIPWVQRPIIFDIRSQPRNVPVITGSK 83
Query: 393 DLQMVNISLRVLSRPDANMLATMYRQLGTDYDEKVLPSICNEVLKSVVAKFNASQLITQR 572
DLQ VNI+LR+L RP + L +Y LG DYDE+VLPSI EVLK+VVA+F+A +LITQR
Sbjct: 84 DLQNVNITLRILYRPIPDQLPKIYTILGQDYDERVLPSIAPEVLKAVVAQFDAGELITQR 143
Query: 573 QQVSLLIRRELVERAADFNIILDDVSLTELSFGKEYTAAVEAKQ 704
+ VS + +EL RA F ILDD+SLT L+FG+E+T AVE KQ
Sbjct: 144 EMVSQRVSQELTVRAKQFGFILDDISLTHLTFGREFTLAVEMKQ 187
>AE014134-3047|AAF53765.1| 276|Drosophila melanogaster CG10691-PB,
isoform B protein.
Length = 276
Score = 198 bits (484), Expect = 5e-51
Identities = 94/164 (57%), Positives = 124/164 (75%)
Frame = +3
Query: 213 SQSVFTVEGGHRAIMFNRIGGVQQHVFTEGMHFRIPWFQYPIIYDIRSRPRKISSPTGSK 392
+ +++ VEGGHRA++F+R G++++V EG HF IPW Q PII+DIRS+PR + TGSK
Sbjct: 24 NSALYNVEGGHRAVIFDRFTGIKENVVGEGTHFFIPWVQRPIIFDIRSQPRNVPVITGSK 83
Query: 393 DLQMVNISLRVLSRPDANMLATMYRQLGTDYDEKVLPSICNEVLKSVVAKFNASQLITQR 572
DLQ VNI+LR+L RP + L +Y LG DYDE+VLPSI EVLK+VVA+F+A +LITQR
Sbjct: 84 DLQNVNITLRILYRPIPDQLPKIYTILGQDYDERVLPSIAPEVLKAVVAQFDAGELITQR 143
Query: 573 QQVSLLIRRELVERAADFNIILDDVSLTELSFGKEYTAAVEAKQ 704
+ VS + +EL RA F ILDD+SLT L+FG+E+T AVE KQ
Sbjct: 144 EMVSQRVSQELTVRAKQFGFILDDISLTHLTFGREFTLAVEMKQ 187
>AE014134-3046|AAN11026.1| 276|Drosophila melanogaster CG10691-PA,
isoform A protein.
Length = 276
Score = 198 bits (484), Expect = 5e-51
Identities = 94/164 (57%), Positives = 124/164 (75%)
Frame = +3
Query: 213 SQSVFTVEGGHRAIMFNRIGGVQQHVFTEGMHFRIPWFQYPIIYDIRSRPRKISSPTGSK 392
+ +++ VEGGHRA++F+R G++++V EG HF IPW Q PII+DIRS+PR + TGSK
Sbjct: 24 NSALYNVEGGHRAVIFDRFTGIKENVVGEGTHFFIPWVQRPIIFDIRSQPRNVPVITGSK 83
Query: 393 DLQMVNISLRVLSRPDANMLATMYRQLGTDYDEKVLPSICNEVLKSVVAKFNASQLITQR 572
DLQ VNI+LR+L RP + L +Y LG DYDE+VLPSI EVLK+VVA+F+A +LITQR
Sbjct: 84 DLQNVNITLRILYRPIPDQLPKIYTILGQDYDERVLPSIAPEVLKAVVAQFDAGELITQR 143
Query: 573 QQVSLLIRRELVERAADFNIILDDVSLTELSFGKEYTAAVEAKQ 704
+ VS + +EL RA F ILDD+SLT L+FG+E+T AVE KQ
Sbjct: 144 EMVSQRVSQELTVRAKQFGFILDDISLTHLTFGREFTLAVEMKQ 187
>X04228-3|CAA27810.1| 203|Drosophila melanogaster protein (
Drosophila mRNA forCc gene from dopa decarboxylase gene
cluster; mapping2.0 kb from the 5'end of Ddc gene. ).
Length = 203
Score = 99 bits (238), Expect = 3e-21
Identities = 58/119 (48%), Positives = 75/119 (63%)
Frame = +3
Query: 348 IRSRPRKISSPTGSKDLQMVNISLRVLSRPDANMLATMYRQLGTDYDEKVLPSICNEVLK 527
IRS+PR + TGSKDLQ VNI+LR+L RP + L +Y LG DYDE+VLPSI
Sbjct: 11 IRSQPRNVPEITGSKDLQNVNITLRILYRPIPDQLPKIYTILGQDYDERVLPSI------ 64
Query: 528 SVVAKFNASQLITQRQQVSLLIRRELVERAADFNIILDDVSLTELSFGKEYTAAVEAKQ 704
A ++++QR + +EL RA F ILDD+SLT L+FG+E+T AVE KQ
Sbjct: 65 -------APEMVSQR------VSQELTVRAKQFGFILDDISLTHLTFGREFTLAVEMKQ 110
>X04227-3|CAA27807.1| 203|Drosophila melanogaster URF 3 protein.
Length = 203
Score = 99 bits (238), Expect = 3e-21
Identities = 58/119 (48%), Positives = 75/119 (63%)
Frame = +3
Query: 348 IRSRPRKISSPTGSKDLQMVNISLRVLSRPDANMLATMYRQLGTDYDEKVLPSICNEVLK 527
IRS+PR + TGSKDLQ VNI+LR+L RP + L +Y LG DYDE+VLPSI
Sbjct: 11 IRSQPRNVPEITGSKDLQNVNITLRILYRPIPDQLPKIYTILGQDYDERVLPSI------ 64
Query: 528 SVVAKFNASQLITQRQQVSLLIRRELVERAADFNIILDDVSLTELSFGKEYTAAVEAKQ 704
A ++++QR + +EL RA F ILDD+SLT L+FG+E+T AVE KQ
Sbjct: 65 -------APEMVSQR------VSQELTVRAKQFGFILDDISLTHLTFGREFTLAVEMKQ 110
>BT010318-1|AAQ23636.1| 342|Drosophila melanogaster AT20211p
protein.
Length = 342
Score = 31.5 bits (68), Expect = 1.2
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +3
Query: 450 LATMYRQLGTDYDEKVLPSICNEVLKSVVAKFN-ASQLIT-QRQQVSLLIRREL 605
L Y + TD D K+ P +C+ KSV+ N SQ +T Q + L R+ L
Sbjct: 184 LGVAYTNVPTDPDVKIYPMVCSTAAKSVIRLINCTSQPVTLQLRSFQALSRQPL 237
>AE014296-2601|AAF49563.2| 342|Drosophila melanogaster CG10516-PA
protein.
Length = 342
Score = 31.5 bits (68), Expect = 1.2
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +3
Query: 450 LATMYRQLGTDYDEKVLPSICNEVLKSVVAKFN-ASQLIT-QRQQVSLLIRREL 605
L Y + TD D K+ P +C+ KSV+ N SQ +T Q + L R+ L
Sbjct: 184 LGVAYTNVPTDPDVKIYPMVCSTAAKSVIRLINCTSQPVTLQLRSFQALSRQPL 237
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,192,560
Number of Sequences: 53049
Number of extensions: 637379
Number of successful extensions: 1367
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1323
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1363
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3108380451
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -