Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt9i23
(587 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY113465-1|AAM29470.1| 151|Drosophila melanogaster RE39820p pro... 32 0.50
AF038598-1|AAB92621.1| 151|Drosophila melanogaster small nuclea... 32 0.50
AE013599-1407|AAF58566.1| 151|Drosophila melanogaster CG8427-PA... 32 0.50
AE014297-3638|AAF56344.1| 841|Drosophila melanogaster CG10951-P... 31 1.2
AY058499-1|AAL13728.1| 1308|Drosophila melanogaster LD15470p pro... 29 4.7
AF146756-1|AAF66735.1| 1226|Drosophila melanogaster transforming... 29 4.7
AE014297-142|AAN13288.1| 1308|Drosophila melanogaster CG9765-PC,... 29 4.7
AE014297-141|AAO41502.1| 1293|Drosophila melanogaster CG9765-PD,... 29 4.7
AE014297-140|AAN13287.1| 1226|Drosophila melanogaster CG9765-PA,... 29 4.7
AE014297-139|AAF52099.2| 1190|Drosophila melanogaster CG9765-PB,... 29 4.7
BT011106-1|AAR82773.1| 1434|Drosophila melanogaster LP05394p pro... 29 6.2
AE014297-2624|AAF55634.2| 1784|Drosophila melanogaster CG6040-PA... 29 6.2
AE014296-3157|AAN11650.1| 111|Drosophila melanogaster CG32212-P... 29 6.2
AE013599-3384|AAF46837.1| 775|Drosophila melanogaster CG10955-P... 29 6.2
AY051705-1|AAK93129.1| 787|Drosophila melanogaster LD24561p pro... 28 8.2
AJ252018-1|CAB93521.1| 787|Drosophila melanogaster mitochondria... 28 8.2
AF146700-1|AAD30171.1| 1190|Drosophila melanogaster transforming... 28 8.2
AE014134-3353|AAF53973.2| 787|Drosophila melanogaster CG9244-PB... 28 8.2
>AY113465-1|AAM29470.1| 151|Drosophila melanogaster RE39820p
protein.
Length = 151
Score = 32.3 bits (70), Expect = 0.50
Identities = 17/43 (39%), Positives = 18/43 (41%)
Frame = +2
Query: 455 RARHRGGLSAGGAAREGVAADPRASGGRALWVPGRSRHHRRRG 583
R R RGG GG G P SGGR W G + R G
Sbjct: 108 RGRGRGGPPGGGRGTGGPPGAPGGSGGRGAWQGGPTGGRGRGG 150
>AF038598-1|AAB92621.1| 151|Drosophila melanogaster small nuclear
ribonucleoproteinSm D3 protein.
Length = 151
Score = 32.3 bits (70), Expect = 0.50
Identities = 17/43 (39%), Positives = 18/43 (41%)
Frame = +2
Query: 455 RARHRGGLSAGGAAREGVAADPRASGGRALWVPGRSRHHRRRG 583
R R RGG GG G P SGGR W G + R G
Sbjct: 108 RGRGRGGPPGGGRGTGGPPGAPGGSGGRGAWQGGPTGGRGRGG 150
>AE013599-1407|AAF58566.1| 151|Drosophila melanogaster CG8427-PA
protein.
Length = 151
Score = 32.3 bits (70), Expect = 0.50
Identities = 17/43 (39%), Positives = 18/43 (41%)
Frame = +2
Query: 455 RARHRGGLSAGGAAREGVAADPRASGGRALWVPGRSRHHRRRG 583
R R RGG GG G P SGGR W G + R G
Sbjct: 108 RGRGRGGPPGGGRGTGGPPGAPGGSGGRGAWQGGPTGGRGRGG 150
>AE014297-3638|AAF56344.1| 841|Drosophila melanogaster CG10951-PA
protein.
Length = 841
Score = 31.1 bits (67), Expect = 1.2
Identities = 29/91 (31%), Positives = 39/91 (42%), Gaps = 6/91 (6%)
Frame = +3
Query: 327 NVGFNSEKAWSGPTWREAPAPVPTEAALAQRLERELRAAK-GASELATAEVLVPAELLAR 503
N G++ E GP + APVP A +E EL A+ +L A+ P E+L +
Sbjct: 368 NKGYSYEDDVGGPGSDQLTAPVPAAAYSNVSMELELPTAQTETKQLMIADTAAPHEILEK 427
Query: 504 ASRQTLALAEG-----EPCGSRGAAVIIDVA 581
S A G P AVI+DVA
Sbjct: 428 RSVLYQLKAFGTCFSMAPIQLPPKAVIVDVA 458
>AY058499-1|AAL13728.1| 1308|Drosophila melanogaster LD15470p protein.
Length = 1308
Score = 29.1 bits (62), Expect = 4.7
Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = +3
Query: 366 TWREAPAPVPTEAALA--QRLERELRAAKGASELATAEVLVPAELLARASRQTLALAE 533
TW+E AP+ + QRL R A S L V++ + L+ + TL+ ++
Sbjct: 837 TWKERQAPISNSPPIPTHQRLNRPPEAISPVSPLGNGTVVLEEQTLSAKEQATLSASD 894
>AF146756-1|AAF66735.1| 1226|Drosophila melanogaster transforming
acidic coiled-coilprotein D-TACC protein.
Length = 1226
Score = 29.1 bits (62), Expect = 4.7
Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = +3
Query: 366 TWREAPAPVPTEAALA--QRLERELRAAKGASELATAEVLVPAELLARASRQTLALAE 533
TW+E AP+ + QRL R A S L V++ + L+ + TL+ ++
Sbjct: 742 TWKERQAPISNSPPIPTHQRLNRPPEAISPVSPLGNGTVVLEEQTLSAKEQATLSASD 799
>AE014297-142|AAN13288.1| 1308|Drosophila melanogaster CG9765-PC,
isoform C protein.
Length = 1308
Score = 29.1 bits (62), Expect = 4.7
Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = +3
Query: 366 TWREAPAPVPTEAALA--QRLERELRAAKGASELATAEVLVPAELLARASRQTLALAE 533
TW+E AP+ + QRL R A S L V++ + L+ + TL+ ++
Sbjct: 837 TWKERQAPISNSPPIPTHQRLNRPPEAISPVSPLGNGTVVLEEQTLSAKEQATLSASD 894
>AE014297-141|AAO41502.1| 1293|Drosophila melanogaster CG9765-PD,
isoform D protein.
Length = 1293
Score = 29.1 bits (62), Expect = 4.7
Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = +3
Query: 366 TWREAPAPVPTEAALA--QRLERELRAAKGASELATAEVLVPAELLARASRQTLALAE 533
TW+E AP+ + QRL R A S L V++ + L+ + TL+ ++
Sbjct: 822 TWKERQAPISNSPPIPTHQRLNRPPEAISPVSPLGNGTVVLEEQTLSAKEQATLSASD 879
>AE014297-140|AAN13287.1| 1226|Drosophila melanogaster CG9765-PA,
isoform A protein.
Length = 1226
Score = 29.1 bits (62), Expect = 4.7
Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = +3
Query: 366 TWREAPAPVPTEAALA--QRLERELRAAKGASELATAEVLVPAELLARASRQTLALAE 533
TW+E AP+ + QRL R A S L V++ + L+ + TL+ ++
Sbjct: 742 TWKERQAPISNSPPIPTHQRLNRPPEAISPVSPLGNGTVVLEEQTLSAKEQATLSASD 799
>AE014297-139|AAF52099.2| 1190|Drosophila melanogaster CG9765-PB,
isoform B protein.
Length = 1190
Score = 29.1 bits (62), Expect = 4.7
Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = +3
Query: 366 TWREAPAPVPTEAALA--QRLERELRAAKGASELATAEVLVPAELLARASRQTLALAE 533
TW+E AP+ + QRL R A S L V++ + L+ + TL+ ++
Sbjct: 705 TWKERQAPISNSPPIPTHQRLNRPPEAISPVSPLGNGTVVLEEQTLSAKEQATLSASD 762
>BT011106-1|AAR82773.1| 1434|Drosophila melanogaster LP05394p
protein.
Length = 1434
Score = 28.7 bits (61), Expect = 6.2
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +3
Query: 378 APAPVPTEAALAQRLERELRAAKGASELATAEVLVPAELLARASR-QTLALAEGEPCGSR 554
AP + +L E+ +AA +E AT+ P+E + +S ++ A A G P G+
Sbjct: 523 APPTPERDYSLVVEFEQATKAAAKPAEKATSSG--PSETSSSSSSTESQATATGAPAGTA 580
Query: 555 GAAVI 569
GAA +
Sbjct: 581 GAATV 585
>AE014297-2624|AAF55634.2| 1784|Drosophila melanogaster CG6040-PA
protein.
Length = 1784
Score = 28.7 bits (61), Expect = 6.2
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +3
Query: 378 APAPVPTEAALAQRLERELRAAKGASELATAEVLVPAELLARASR-QTLALAEGEPCGSR 554
AP + +L E+ +AA +E AT+ P+E + +S ++ A A G P G+
Sbjct: 737 APPTPERDYSLVVEFEQATKAAAKPAEKATSSG--PSETSSSSSSTESQATATGAPAGTA 794
Query: 555 GAAVI 569
GAA +
Sbjct: 795 GAATV 799
>AE014296-3157|AAN11650.1| 111|Drosophila melanogaster CG32212-PA
protein.
Length = 111
Score = 28.7 bits (61), Expect = 6.2
Identities = 26/86 (30%), Positives = 34/86 (39%), Gaps = 5/86 (5%)
Frame = +3
Query: 330 VGFNSEKAWSGPTWREAPAPV---PTEAALAQRLERELRAAKGASELATAEVLVPAELLA 500
+ + A+S P A A V PT A + R ASE+A+ V A+ A
Sbjct: 26 LAYTGPLAYSAPLDYSALAAVVTAPTPPVTATSIARNNNGIDAASEIASVAAPVVAKYAA 85
Query: 501 RASRQTLALAEGEP--CGSRGAAVII 572
+ LA P C S A VII
Sbjct: 86 ASLAYPSRLANSAPISCASAAAQVII 111
>AE013599-3384|AAF46837.1| 775|Drosophila melanogaster CG10955-PA
protein.
Length = 775
Score = 28.7 bits (61), Expect = 6.2
Identities = 21/68 (30%), Positives = 36/68 (52%)
Frame = +3
Query: 372 REAPAPVPTEAALAQRLERELRAAKGASELATAEVLVPAELLARASRQTLALAEGEPCGS 551
REA AP+PT+A+ + L+ E K ++E+ +A L L A+ + A+A P +
Sbjct: 241 REAQAPLPTQASTSTLLDVE---PKPSNEVRSASPLSTPALNRDAASTSAAVASIMPDDA 297
Query: 552 RGAAVIID 575
+A + D
Sbjct: 298 ASSAGVSD 305
>AY051705-1|AAK93129.1| 787|Drosophila melanogaster LD24561p
protein.
Length = 787
Score = 28.3 bits (60), Expect = 8.2
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +2
Query: 488 GAAREGVAADPRASGGRALWVPGRSRHH 571
G++RE A +PR GGRA+ V +R H
Sbjct: 676 GSSREHAALEPRHLGGRAIIVKSFARIH 703
>AJ252018-1|CAB93521.1| 787|Drosophila melanogaster mitochondrial
aconitase protein.
Length = 787
Score = 28.3 bits (60), Expect = 8.2
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +2
Query: 488 GAAREGVAADPRASGGRALWVPGRSRHH 571
G++RE A +PR GGRA+ V +R H
Sbjct: 676 GSSREHAALEPRHLGGRAIIVKSFARIH 703
>AF146700-1|AAD30171.1| 1190|Drosophila melanogaster transforming
acidic coiled-coilcontaining protein protein.
Length = 1190
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Frame = +3
Query: 366 TWREAPAPVPTEAALA--QRLERELRAAKGASELATAEVLVPAELLARASRQTLALAE 533
TW+E AP+ + QRL R A S L V++ L+ + TL+ ++
Sbjct: 705 TWKERQAPISNSPPIPTHQRLNRPPEAISPVSPLGNGTVVLEEHTLSAKEQATLSASD 762
>AE014134-3353|AAF53973.2| 787|Drosophila melanogaster CG9244-PB
protein.
Length = 787
Score = 28.3 bits (60), Expect = 8.2
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +2
Query: 488 GAAREGVAADPRASGGRALWVPGRSRHH 571
G++RE A +PR GGRA+ V +R H
Sbjct: 676 GSSREHAALEPRHLGGRAIIVKSFARIH 703
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,970,041
Number of Sequences: 53049
Number of extensions: 421833
Number of successful extensions: 1692
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1583
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1689
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2358819486
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -