Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt9i15
         (255 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC018136-1|AAH18136.1|  959|Homo sapiens GTF2I repeat domain con...    27   8.3  
AY648295-1|AAT68469.1|  976|Homo sapiens GTF2I repeat domain con...    27   8.3  
AF156489-1|AAF17358.1|  944|Homo sapiens putative transcription ...    27   8.3  
AF151354-1|AAF19786.1|  959|Homo sapiens general transcription f...    27   8.3  
AF118270-1|AAD14687.2|  944|Homo sapiens muscle TFII-I repeat do...    27   8.3  
AF104923-1|AAD27668.1|  944|Homo sapiens putative transcription ...    27   8.3  
AF089107-1|AAF21796.1|  959|Homo sapiens RBAP2 protein.                27   8.3  
AC004851-2|AAS00361.1|  788|Homo sapiens unknown protein.              27   8.3  
AC004851-1|AAS00362.1|  773|Homo sapiens unknown protein.              27   8.3  
AB209389-1|BAD92626.1|  967|Homo sapiens GTF2I repeat domain con...    27   8.3  

>BC018136-1|AAH18136.1|  959|Homo sapiens GTF2I repeat domain
           containing 1 protein.
          Length = 959

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +1

Query: 22  KQTTNSEKGHLLRSASSQTMDMLNIKPLSEDIK 120
           ++ T+S  GHL    S   M+ML  K LSED +
Sbjct: 516 EEMTDSMPGHLPSEDSGYGMEMLTDKGLSEDAR 548


>AY648295-1|AAT68469.1|  976|Homo sapiens GTF2I repeat domain
           containing protein 1 protein.
          Length = 976

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +1

Query: 22  KQTTNSEKGHLLRSASSQTMDMLNIKPLSEDIK 120
           ++ T+S  GHL    S   M+ML  K LSED +
Sbjct: 548 EEMTDSMPGHLPSEDSGYGMEMLTDKGLSEDAR 580


>AF156489-1|AAF17358.1|  944|Homo sapiens putative transcription
           factor protein.
          Length = 944

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +1

Query: 22  KQTTNSEKGHLLRSASSQTMDMLNIKPLSEDIK 120
           ++ T+S  GHL    S   M+ML  K LSED +
Sbjct: 516 EEMTDSMPGHLPSEDSGYGMEMLTDKGLSEDAR 548


>AF151354-1|AAF19786.1|  959|Homo sapiens general transcription
           factor 3 protein.
          Length = 959

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +1

Query: 22  KQTTNSEKGHLLRSASSQTMDMLNIKPLSEDIK 120
           ++ T+S  GHL    S   M+ML  K LSED +
Sbjct: 516 EEMTDSMPGHLPSEDSGYGMEMLTDKGLSEDAR 548


>AF118270-1|AAD14687.2|  944|Homo sapiens muscle TFII-I repeat
           domain-containing protein 1 protein.
          Length = 944

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +1

Query: 22  KQTTNSEKGHLLRSASSQTMDMLNIKPLSEDIK 120
           ++ T+S  GHL    S   M+ML  K LSED +
Sbjct: 516 EEMTDSMPGHLPSEDSGYGMEMLTDKGLSEDAR 548


>AF104923-1|AAD27668.1|  944|Homo sapiens putative transcription
           factor protein.
          Length = 944

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +1

Query: 22  KQTTNSEKGHLLRSASSQTMDMLNIKPLSEDIK 120
           ++ T+S  GHL    S   M+ML  K LSED +
Sbjct: 516 EEMTDSMPGHLPSEDSGYGMEMLTDKGLSEDAR 548


>AF089107-1|AAF21796.1|  959|Homo sapiens RBAP2 protein.
          Length = 959

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +1

Query: 22  KQTTNSEKGHLLRSASSQTMDMLNIKPLSEDIK 120
           ++ T+S  GHL    S   M+ML  K LSED +
Sbjct: 516 EEMTDSMPGHLPSEDSGYGMEMLTDKGLSEDAR 548


>AC004851-2|AAS00361.1|  788|Homo sapiens unknown protein.
          Length = 788

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +1

Query: 22  KQTTNSEKGHLLRSASSQTMDMLNIKPLSEDIK 120
           ++ T+S  GHL    S   M+ML  K LSED +
Sbjct: 516 EEMTDSMPGHLPSEDSGYGMEMLTDKGLSEDAR 548


>AC004851-1|AAS00362.1|  773|Homo sapiens unknown protein.
          Length = 773

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +1

Query: 22  KQTTNSEKGHLLRSASSQTMDMLNIKPLSEDIK 120
           ++ T+S  GHL    S   M+ML  K LSED +
Sbjct: 516 EEMTDSMPGHLPSEDSGYGMEMLTDKGLSEDAR 548


>AB209389-1|BAD92626.1|  967|Homo sapiens GTF2I repeat domain
           containing 1 isoform 2 variant protein.
          Length = 967

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +1

Query: 22  KQTTNSEKGHLLRSASSQTMDMLNIKPLSEDIK 120
           ++ T+S  GHL    S   M+ML  K LSED +
Sbjct: 523 EEMTDSMPGHLPSEDSGYGMEMLTDKGLSEDAR 555


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.303    0.116    0.319 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,027,560
Number of Sequences: 237096
Number of extensions: 245207
Number of successful extensions: 303
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 303
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 303
length of database: 76,859,062
effective HSP length: 62
effective length of database: 62,159,110
effective search space used: 1367500420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 17 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.9 bits)