Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt9h23
         (634 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC008861-1|AAH08861.1|  351|Homo sapiens ATPase, H+ transporting...   293   4e-79
BC065207-1|AAH65207.1|  350|Homo sapiens ATPase, H+ transporting...   234   2e-61
AY079172-1|AAL87000.1|  350|Homo sapiens vacuolar H+ ATPase d2 s...   234   2e-61
AK096027-1|BAC04679.1|  350|Homo sapiens protein ( Homo sapiens ...   234   2e-61
X71490-1|CAA50591.1|  274|Homo sapiens vacuolar proton ATPase pr...   175   8e-44
BC020880-1|AAH20880.1|  293|Homo sapiens F-box protein 6 protein.      32   1.5  
AL031731-6|CAI20214.1|  293|Homo sapiens F-box protein 6 protein.      32   1.5  
AF233223-1|AAF67153.1|  293|Homo sapiens F-box protein FBG2 prot...    32   1.5  

>BC008861-1|AAH08861.1|  351|Homo sapiens ATPase, H+ transporting,
           lysosomal 38kDa, V0 subunit d1 protein.
          Length = 351

 Score =  293 bits (718), Expect = 4e-79
 Identities = 130/165 (78%), Positives = 150/165 (90%)
 Frame = +2

Query: 140 FNIDAGYLEGLCRGFKCGILKQSDYLNLVQCETLEDLKLHLQGTDYGTFLANEPSPLSVS 319
           FN+D GYLEGL RG K G+L Q+DYLNLVQCETLEDLKLHLQ TDYG FLANE SPL+VS
Sbjct: 9   FNVDNGYLEGLVRGLKAGVLSQADYLNLVQCETLEDLKLHLQSTDYGNFLANEASPLTVS 68

Query: 320 TIDDKLREKLVIEFQHLRNHSVEPLSTFLDFITYSYMIDNIILLITGTLHQRPISELIPK 499
            IDD+L+EK+V+EF+H+RNH+ EPL++FLDFITYSYMIDN+ILLITGTLHQR I+EL+PK
Sbjct: 69  VIDDRLKEKMVVEFRHMRNHAYEPLASFLDFITYSYMIDNVILLITGTLHQRSIAELVPK 128

Query: 500 CHPLGSFEQMEAIHVAATPAELYNAVLVDTPLAPFFVDCIXEQDL 634
           CHPLGSFEQMEA+++A TPAELYNA+LVDTPLA FF DCI EQDL
Sbjct: 129 CHPLGSFEQMEAVNIAQTPAELYNAILVDTPLAAFFQDCISEQDL 173


>BC065207-1|AAH65207.1|  350|Homo sapiens ATPase, H+ transporting,
           lysosomal 38kDa, V0 subunit d2 protein.
          Length = 350

 Score =  234 bits (572), Expect = 2e-61
 Identities = 101/165 (61%), Positives = 134/165 (81%)
 Frame = +2

Query: 140 FNIDAGYLEGLCRGFKCGILKQSDYLNLVQCETLEDLKLHLQGTDYGTFLANEPSPLSVS 319
           FN+D GYLEGL RG K  +L Q DY+NLVQCETLEDLK+HLQ TDYG FLAN  +PL+VS
Sbjct: 9   FNVDHGYLEGLVRGCKASLLTQQDYINLVQCETLEDLKIHLQTTDYGNFLANHTNPLTVS 68

Query: 320 TIDDKLREKLVIEFQHLRNHSVEPLSTFLDFITYSYMIDNIILLITGTLHQRPISELIPK 499
            ID ++R++L  EF++ RNHS+EPLSTFL ++T SYMIDN+ILL+ G L ++ + E++ K
Sbjct: 69  KIDTEMRKRLCGEFEYFRNHSLEPLSTFLTYMTCSYMIDNVILLMNGALQKKSVKEILGK 128

Query: 500 CHPLGSFEQMEAIHVAATPAELYNAVLVDTPLAPFFVDCIXEQDL 634
           CHPLG F +MEA+++A TP++L+NA+L++TPLAPFF DC+ E  L
Sbjct: 129 CHPLGRFTEMEAVNIAETPSDLFNAILIETPLAPFFQDCMSENAL 173


>AY079172-1|AAL87000.1|  350|Homo sapiens vacuolar H+ ATPase d2
           subunit protein.
          Length = 350

 Score =  234 bits (572), Expect = 2e-61
 Identities = 101/165 (61%), Positives = 134/165 (81%)
 Frame = +2

Query: 140 FNIDAGYLEGLCRGFKCGILKQSDYLNLVQCETLEDLKLHLQGTDYGTFLANEPSPLSVS 319
           FN+D GYLEGL RG K  +L Q DY+NLVQCETLEDLK+HLQ TDYG FLAN  +PL+VS
Sbjct: 9   FNVDHGYLEGLVRGCKASLLTQQDYINLVQCETLEDLKIHLQTTDYGNFLANHTNPLTVS 68

Query: 320 TIDDKLREKLVIEFQHLRNHSVEPLSTFLDFITYSYMIDNIILLITGTLHQRPISELIPK 499
            ID ++R++L  EF++ RNHS+EPLSTFL ++T SYMIDN+ILL+ G L ++ + E++ K
Sbjct: 69  KIDTEMRKRLCGEFEYFRNHSLEPLSTFLTYMTCSYMIDNVILLMNGALQKKSVKEILGK 128

Query: 500 CHPLGSFEQMEAIHVAATPAELYNAVLVDTPLAPFFVDCIXEQDL 634
           CHPLG F +MEA+++A TP++L+NA+L++TPLAPFF DC+ E  L
Sbjct: 129 CHPLGRFTEMEAVNIAETPSDLFNAILIETPLAPFFQDCMSENAL 173


>AK096027-1|BAC04679.1|  350|Homo sapiens protein ( Homo sapiens
           cDNA FLJ38708 fis, clone KIDNE2002872, moderately
           similar to Mus musculus Ac39/physophilin mRNA. ).
          Length = 350

 Score =  234 bits (572), Expect = 2e-61
 Identities = 101/165 (61%), Positives = 134/165 (81%)
 Frame = +2

Query: 140 FNIDAGYLEGLCRGFKCGILKQSDYLNLVQCETLEDLKLHLQGTDYGTFLANEPSPLSVS 319
           FN+D GYLEGL RG K  +L Q DY+NLVQCETLEDLK+HLQ TDYG FLAN  +PL+VS
Sbjct: 9   FNVDHGYLEGLVRGCKASLLTQQDYINLVQCETLEDLKIHLQTTDYGNFLANHTNPLTVS 68

Query: 320 TIDDKLREKLVIEFQHLRNHSVEPLSTFLDFITYSYMIDNIILLITGTLHQRPISELIPK 499
            ID ++R++L  EF++ RNHS+EPLSTFL ++T SYMIDN+ILL+ G L ++ + E++ K
Sbjct: 69  KIDTEMRKRLCGEFEYFRNHSLEPLSTFLTYMTCSYMIDNVILLMNGALQKKSVKEILGK 128

Query: 500 CHPLGSFEQMEAIHVAATPAELYNAVLVDTPLAPFFVDCIXEQDL 634
           CHPLG F +MEA+++A TP++L+NA+L++TPLAPFF DC+ E  L
Sbjct: 129 CHPLGRFTEMEAVNIAETPSDLFNAILIETPLAPFFQDCMSENAL 173


>X71490-1|CAA50591.1|  274|Homo sapiens vacuolar proton ATPase
           protein.
          Length = 274

 Score =  175 bits (427), Expect = 8e-44
 Identities = 76/96 (79%), Positives = 90/96 (93%)
 Frame = +2

Query: 347 LVIEFQHLRNHSVEPLSTFLDFITYSYMIDNIILLITGTLHQRPISELIPKCHPLGSFEQ 526
           +V+EF+H+RNH+ EPL++FLDFITYSYMIDN+ILLITGTLHQR I+EL+PKCHPLGSFEQ
Sbjct: 1   MVVEFRHMRNHAYEPLASFLDFITYSYMIDNVILLITGTLHQRSIAELVPKCHPLGSFEQ 60

Query: 527 MEAIHVAATPAELYNAVLVDTPLAPFFVDCIXEQDL 634
           MEA+++A TPAELYNA+LVDTPLA FF DCI EQDL
Sbjct: 61  MEAVNIAQTPAELYNAILVDTPLAAFFQDCISEQDL 96


>BC020880-1|AAH20880.1|  293|Homo sapiens F-box protein 6 protein.
          Length = 293

 Score = 32.3 bits (70), Expect = 1.5
 Identities = 19/77 (24%), Positives = 36/77 (46%)
 Frame = +2

Query: 86  RKLFLVSLKIIIKMKGCIFNIDAGYLEGLCRGFKCGILKQSDYLNLVQCETLEDLKLHLQ 265
           +K F+ S ++ +K +  +  +  GY E L   F+  I+ +  +     C     LK+ L 
Sbjct: 130 KKYFVTSYEMCLKSQ-LVDLVAEGYWEELLDTFRPDIVVKDWFAARADCGCTYQLKVQLA 188

Query: 266 GTDYGTFLANEPSPLSV 316
             DY    + EP P+++
Sbjct: 189 SADYFVLASFEPPPVTI 205


>AL031731-6|CAI20214.1|  293|Homo sapiens F-box protein 6 protein.
          Length = 293

 Score = 32.3 bits (70), Expect = 1.5
 Identities = 19/77 (24%), Positives = 36/77 (46%)
 Frame = +2

Query: 86  RKLFLVSLKIIIKMKGCIFNIDAGYLEGLCRGFKCGILKQSDYLNLVQCETLEDLKLHLQ 265
           +K F+ S ++ +K +  +  +  GY E L   F+  I+ +  +     C     LK+ L 
Sbjct: 130 KKYFVTSYEMCLKSQ-LVDLVAEGYWEELLDTFRPDIVVKDWFAARADCGCTYQLKVQLA 188

Query: 266 GTDYGTFLANEPSPLSV 316
             DY    + EP P+++
Sbjct: 189 SADYFVLASFEPPPVTI 205


>AF233223-1|AAF67153.1|  293|Homo sapiens F-box protein FBG2
           protein.
          Length = 293

 Score = 32.3 bits (70), Expect = 1.5
 Identities = 19/77 (24%), Positives = 36/77 (46%)
 Frame = +2

Query: 86  RKLFLVSLKIIIKMKGCIFNIDAGYLEGLCRGFKCGILKQSDYLNLVQCETLEDLKLHLQ 265
           +K F+ S ++ +K +  +  +  GY E L   F+  I+ +  +     C     LK+ L 
Sbjct: 130 KKYFVTSYEMCLKSQ-LVDLVAEGYWEELLDTFRPDIVVKDWFAARADCGCTYQLKVQLA 188

Query: 266 GTDYGTFLANEPSPLSV 316
             DY    + EP P+++
Sbjct: 189 SADYFVLASFEPPPVTI 205


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,401,103
Number of Sequences: 237096
Number of extensions: 1962995
Number of successful extensions: 3802
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3656
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3802
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6916500330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)