Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt9h19
         (326 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66498-2|CAA91291.2|  419|Caenorhabditis elegans Hypothetical pr...    32   0.11 
Z70681-1|CAA94580.1|  307|Caenorhabditis elegans Hypothetical pr...    31   0.20 
AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density l...    31   0.26 
U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like p...    27   4.2  
U21324-18|AAA62570.2|  419|Caenorhabditis elegans C-type lectin ...    27   4.2  
Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical pr...    26   5.6  
X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy ch...    26   5.6  
U58745-2|AAU05593.1|  569|Caenorhabditis elegans Hypothetical pr...    26   5.6  
U58745-1|AAB00620.2|  574|Caenorhabditis elegans Hypothetical pr...    26   5.6  
Z82084-1|CAB04978.1|  398|Caenorhabditis elegans Hypothetical pr...    26   7.4  
Z79696-1|CAB01972.1| 1584|Caenorhabditis elegans Hypothetical pr...    26   7.4  
Z68333-2|CAA92722.1|  149|Caenorhabditis elegans Hypothetical pr...    26   7.4  
AC024843-5|AAK70666.3|  740|Caenorhabditis elegans Hypothetical ...    25   9.7  

>Z66498-2|CAA91291.2|  419|Caenorhabditis elegans Hypothetical
           protein M195.2 protein.
          Length = 419

 Score = 31.9 bits (69), Expect = 0.11
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = +1

Query: 73  CEHRTSNTCHPLRPKHPAGCYYPTRCRNTPGYFC 174
           C+   +N+C  L P+   GC  PT CRNT    C
Sbjct: 275 CQTGCANSCAQLSPQPTEGC--PTNCRNTCNEVC 306


>Z70681-1|CAA94580.1|  307|Caenorhabditis elegans Hypothetical
           protein C30F2.1 protein.
          Length = 307

 Score = 31.1 bits (67), Expect = 0.20
 Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
 Frame = +1

Query: 97  CHPLRPKHPAGCYYPTRCRNTPGYFC*SARMG--NYRS--RRQCI*RQ 228
           C P+RPK P G   P  CR  PG      R G  NY +   ++CI R+
Sbjct: 102 CEPIRPKCPPGPPGPPGCRGEPGPSGLPGRRGINNYETLPLKKCIWRE 149


>AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density
            lipoprotein receptorrelated protein 2 protein.
          Length = 2192

 Score = 30.7 bits (66), Expect = 0.26
 Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
 Frame = +1

Query: 73   CEHRTS--NT-CHPLRPKHPAGCYYPTRCRNTPGY 168
            CE   +  NT C P+  K P  C+   RC +TPGY
Sbjct: 1863 CEQNAAAHNTDCSPICQKQPNWCHNGGRCLDTPGY 1897


>U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like
           protease protein 1 protein.
          Length = 293

 Score = 26.6 bits (56), Expect = 4.2
 Identities = 12/47 (25%), Positives = 23/47 (48%)
 Frame = +2

Query: 185 GWGTTVQGGSVSDGNLHKLELIVTNKENCREQYKGHDRVVTDNKFCA 325
           GWG+T++G S+S   L ++ + + +   C        R+   +  CA
Sbjct: 181 GWGSTIEGSSLSAPTLREIHVPLLSTLFCSSLPNYIGRIHLPSMLCA 227


>U21324-18|AAA62570.2|  419|Caenorhabditis elegans C-type lectin
           protein 5 protein.
          Length = 419

 Score = 26.6 bits (56), Expect = 4.2
 Identities = 12/34 (35%), Positives = 15/34 (44%)
 Frame = +2

Query: 191 GTTVQGGSVSDGNLHKLELIVTNKENCREQYKGH 292
           G  + G   SD      EL  T+ +NC   Y GH
Sbjct: 133 GKWLNGNCESDPRAFVCELPATHADNCTYNYNGH 166


>Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical
           protein K12F2.1 protein.
          Length = 1969

 Score = 26.2 bits (55), Expect = 5.6
 Identities = 15/52 (28%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
 Frame = -2

Query: 256 GHNEFELVEVA--VRYTAALNGSSPSEQINKNTLGYYDTLLDNSTLLDVWAE 107
           G   F +V  A  VRY A        + +N   +       DNS +LD+W +
Sbjct: 578 GDAHFAIVHYAGTVRYNATNFLEKNKDPLNDTAVALLKHSTDNSLMLDIWQD 629


>X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy chain
           3 protein.
          Length = 1969

 Score = 26.2 bits (55), Expect = 5.6
 Identities = 15/52 (28%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
 Frame = -2

Query: 256 GHNEFELVEVA--VRYTAALNGSSPSEQINKNTLGYYDTLLDNSTLLDVWAE 107
           G   F +V  A  VRY A        + +N   +       DNS +LD+W +
Sbjct: 578 GDAHFAIVHYAGTVRYNATNFLEKNKDPLNDTAVALLKHSTDNSLMLDIWQD 629


>U58745-2|AAU05593.1|  569|Caenorhabditis elegans Hypothetical
           protein C10G6.1b protein.
          Length = 569

 Score = 26.2 bits (55), Expect = 5.6
 Identities = 13/45 (28%), Positives = 22/45 (48%)
 Frame = -2

Query: 301 DAIMTLVLFPAVFFVGHNEFELVEVAVRYTAALNGSSPSEQINKN 167
           + +  L L   +FF+  N+  LV+  +    + NGS   E+ N N
Sbjct: 233 ELLQFLKLNRGLFFIRSNKVSLVKNRLNEDGSENGSDEGEETNNN 277


>U58745-1|AAB00620.2|  574|Caenorhabditis elegans Hypothetical
           protein C10G6.1a protein.
          Length = 574

 Score = 26.2 bits (55), Expect = 5.6
 Identities = 13/45 (28%), Positives = 22/45 (48%)
 Frame = -2

Query: 301 DAIMTLVLFPAVFFVGHNEFELVEVAVRYTAALNGSSPSEQINKN 167
           + +  L L   +FF+  N+  LV+  +    + NGS   E+ N N
Sbjct: 233 ELLQFLKLNRGLFFIRSNKVSLVKNRLNEDGSENGSDEGEETNNN 277


>Z82084-1|CAB04978.1|  398|Caenorhabditis elegans Hypothetical
           protein ZK1053.1 protein.
          Length = 398

 Score = 25.8 bits (54), Expect = 7.4
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = -2

Query: 115 WAEVDGMCYSYDAHILVVILLREFGMVN 32
           W +    C+ YD  +L ++LL  F  ++
Sbjct: 356 WCKYQANCFRYDQSVLNLLLLNNFSEIH 383


>Z79696-1|CAB01972.1| 1584|Caenorhabditis elegans Hypothetical
           protein F54F3.1 protein.
          Length = 1584

 Score = 25.8 bits (54), Expect = 7.4
 Identities = 10/36 (27%), Positives = 20/36 (55%)
 Frame = +1

Query: 130 CYYPTRCRNTPGYFC*SARMGNYRSRRQCI*RQPPQ 237
           C+  + C++  G FC +   G Y + ++C+ +  PQ
Sbjct: 368 CHANSVCQDFEGGFCCNCDTGFYGNGKECLPKGEPQ 403


>Z68333-2|CAA92722.1|  149|Caenorhabditis elegans Hypothetical
           protein C05C12.5 protein.
          Length = 149

 Score = 25.8 bits (54), Expect = 7.4
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = -3

Query: 225 PSDTLPP*TVVPHPSRSTK 169
           PSD+LP  T+VP PS  ++
Sbjct: 41  PSDSLPDRTIVPSPSSQSE 59


>AC024843-5|AAK70666.3|  740|Caenorhabditis elegans Hypothetical
           protein Y61A9LA.8 protein.
          Length = 740

 Score = 25.4 bits (53), Expect = 9.7
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = +1

Query: 115 KHPAGCYYPTRCRNTPGYF 171
           KHP  C +   CRN   YF
Sbjct: 688 KHPKECRFGANCRNPSCYF 706


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,126,300
Number of Sequences: 27780
Number of extensions: 171562
Number of successful extensions: 559
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 537
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 559
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 398409266
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)